RNA–Protein interactions for RNA: ENST00000557424.1

HMGB1P14-201, Transcript of high mobility group box 1 pseudogene 14, humanhuman

BASIC

Gene HMGB1P14, Length 591 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P14-201ENST00000557424 KIAA1191Q96A73 305 aa3.84□□□□□ -1.79
HMGB1P14-201ENST00000557424 LCORQ96JN0 433 aaPredicted RBP3.84□□□□□ -1.79
HMGB1P14-201ENST00000557424 HIST1H2AHQ96KK5 128 aa3.84□□□□□ -1.79
HMGB1P14-201ENST00000557424 NUP88Q99567 741 aaPredicted RBP3.84□□□□□ -1.79
HMGB1P14-201ENST00000557424 HIST1H2AJQ99878 128 aa3.84□□□□□ -1.79
HMGB1P14-201ENST00000557424 SGPP1Q9BX95 441 aa3.84□□□□□ -1.79
HMGB1P14-201ENST00000557424 TRMT13Q9NUP7 481 aaKnown RBP3.84□□□□□ -1.79
HMGB1P14-201ENST00000557424 KCMF1Q9P0J7 381 aa3.84□□□□□ -1.79
HMGB1P14-201ENST00000557424 ZNF69Q9UC07 566 aa3.84□□□□□ -1.79
HMGB1P14-201ENST00000557424 ZFP69BQ9UJL9 534 aa3.84□□□□□ -1.79
HMGB1P14-201ENST00000557424 CDC23Q9UJX2 597 aa3.84□□□□□ -1.79
HMGB1P14-201ENST00000557424 CROTQ9UKG9 612 aa3.84□□□□□ -1.79
HMGB1P14-201ENST00000557424 VWA7Q9Y334 891 aa3.84□□□□□ -1.79
HMGB1P14-201ENST00000557424 NOC2LQ9Y3T9 749 aaKnown RBP3.84□□□□□ -1.79
HMGB1P14-201ENST00000557424 TCRBV5S4A2TA0A5A2 114 aa3.83□□□□□ -1.8
HMGB1P14-201ENST00000557424 FAM90A27PA6NNH2 459 aa3.83□□□□□ -1.8
HMGB1P14-201ENST00000557424 NCK2O43639 380 aa3.83□□□□□ -1.8
HMGB1P14-201ENST00000557424 OFD1O75665 1012 aa3.83□□□□□ -1.8
HMGB1P14-201ENST00000557424 ZBED1O96006 694 aa3.83□□□□□ -1.8
HMGB1P14-201ENST00000557424 MMEP08473 750 aa3.83□□□□□ -1.8
HMGB1P14-201ENST00000557424 OSMP13725 252 aa3.83□□□□□ -1.8
HMGB1P14-201ENST00000557424 ATF2P15336 505 aa3.83□□□□□ -1.8
HMGB1P14-201ENST00000557424 RRM1P23921 792 aa3.83□□□□□ -1.8
HMGB1P14-201ENST00000557424 KCNC1P48547 511 aa3.83□□□□□ -1.8
HMGB1P14-201ENST00000557424 KRT85P78386 507 aa3.83□□□□□ -1.8
HMGB1P14-201ENST00000557424 SRSF2Q01130 221 aaKnown RBP3.83□□□□□ -1.8
HMGB1P14-201ENST00000557424 KRT72Q14CN4 511 aa3.83□□□□□ -1.8
HMGB1P14-201ENST00000557424 KIAA0753Q2KHM9 967 aa3.83□□□□□ -1.8
HMGB1P14-201ENST00000557424 ATAT1Q5SQI0 421 aa3.83□□□□□ -1.8
HMGB1P14-201ENST00000557424 PRAMEF9Q5VWM5 478 aa3.83□□□□□ -1.8
HMGB1P14-201ENST00000557424 JAKMIP3Q5VZ66 844 aa3.83□□□□□ -1.8
HMGB1P14-201ENST00000557424 CPZQ66K79 652 aa3.83□□□□□ -1.8
HMGB1P14-201ENST00000557424 GRAMD4Q6IC98 578 aa3.83□□□□□ -1.8
HMGB1P14-201ENST00000557424 SWSAP1Q6NVH7 229 aa3.83□□□□□ -1.8
HMGB1P14-201ENST00000557424 LIPIQ6XZB0 460 aa3.83□□□□□ -1.8
HMGB1P14-201ENST00000557424 GPR155Q7Z3F1 870 aa3.83□□□□□ -1.8
HMGB1P14-201ENST00000557424 BMP8AQ7Z5Y6 402 aa3.83□□□□□ -1.8
HMGB1P14-201ENST00000557424 LGI4Q8N135 537 aa3.83□□□□□ -1.8
HMGB1P14-201ENST00000557424 CARFQ8N187 725 aa3.83□□□□□ -1.8
HMGB1P14-201ENST00000557424 KLHL36Q8N4N3 616 aa3.83□□□□□ -1.8
HMGB1P14-201ENST00000557424 PPHLN1Q8NEY8 458 aaKnown RBP3.83□□□□□ -1.8
HMGB1P14-201ENST00000557424 SH3RF2Q8TEC5 729 aa3.83□□□□□ -1.8
HMGB1P14-201ENST00000557424 GFM2Q969S9 779 aaKnown RBP3.83□□□□□ -1.8
HMGB1P14-201ENST00000557424 DACT3Q96B18 629 aaPredicted RBP3.83□□□□□ -1.8
HMGB1P14-201ENST00000557424 SKA1Q96BD8 255 aa3.83□□□□□ -1.8
HMGB1P14-201ENST00000557424 RAX2Q96IS3 184 aa3.83□□□□□ -1.8
HMGB1P14-201ENST00000557424 CCDC138Q96M89 665 aa3.83□□□□□ -1.8
HMGB1P14-201ENST00000557424 TUBGCP5Q96RT8 1024 aa3.83□□□□□ -1.8
HMGB1P14-201ENST00000557424 GORASP1Q9BQQ3 440 aa3.83□□□□□ -1.8
HMGB1P14-201ENST00000557424 KRTAP9-8Q9BYQ0 159 aa3.83□□□□□ -1.8
HMGB1P14-201ENST00000557424 WDR12Q9GZL7 423 aaKnown RBP3.83□□□□□ -1.8
HMGB1P14-201ENST00000557424 BCAS3Q9H6U6 928 aa3.83□□□□□ -1.8
HMGB1P14-201ENST00000557424 RTEL1Q9NZ71 1219 aa3.83□□□□□ -1.8
HMGB1P14-201ENST00000557424 TUBD1Q9UJT1 453 aa3.83□□□□□ -1.8
HMGB1P14-201ENST00000557424 HCFC2Q9Y5Z7 792 aa3.83□□□□□ -1.8
HMGB1P14-201ENST00000557424 MRFAP1Q9Y605 127 aa3.83□□□□□ -1.8
HMGB1P14-201ENST00000557424 GOLGA6L22H0YM25 854 aa3.82□□□□□ -1.8
HMGB1P14-201ENST00000557424 KDM1AO60341 852 aa3.82□□□□□ -1.8
HMGB1P14-201ENST00000557424 SNX2O60749 519 aa3.82□□□□□ -1.8
HMGB1P14-201ENST00000557424 HMGCRP04035 888 aa3.82□□□□□ -1.8
HMGB1P14-201ENST00000557424 PYGLP06737 847 aa3.82□□□□□ -1.8
HMGB1P14-201ENST00000557424 POU2F2P09086 479 aa3.82□□□□□ -1.8
HMGB1P14-201ENST00000557424 ZBTB48P10074 688 aaPredicted RBP3.82□□□□□ -1.8
HMGB1P14-201ENST00000557424 ZNF28P17035 718 aa3.82□□□□□ -1.8
HMGB1P14-201ENST00000557424 ABCB4P21439 1286 aa3.82□□□□□ -1.8
HMGB1P14-201ENST00000557424 POLD1P28340 1107 aa3.82□□□□□ -1.8
HMGB1P14-201ENST00000557424 MC3RP41968 323 aa3.82□□□□□ -1.8
HMGB1P14-201ENST00000557424 PIK3CBP42338 1070 aa3.82□□□□□ -1.8
HMGB1P14-201ENST00000557424 ETV4P43268 484 aa3.82□□□□□ -1.8
HMGB1P14-201ENST00000557424 MAPK9P45984 424 aa3.82□□□□□ -1.8
HMGB1P14-201ENST00000557424 PRIM2P49643 509 aa3.82□□□□□ -1.8
HMGB1P14-201ENST00000557424 ADCY2Q08462 1091 aa3.82□□□□□ -1.8
HMGB1P14-201ENST00000557424 SEMA5AQ13591 1074 aa3.82□□□□□ -1.8
HMGB1P14-201ENST00000557424 SPIDRQ14159 915 aa3.82□□□□□ -1.8
HMGB1P14-201ENST00000557424 PUM3Q15397 648 aaKnown RBP3.82□□□□□ -1.8
HMGB1P14-201ENST00000557424 DGKDQ16760 1214 aa3.82□□□□□ -1.8
HMGB1P14-201ENST00000557424 CCDC93Q567U6 631 aa3.82□□□□□ -1.8
HMGB1P14-201ENST00000557424 L1TD1Q5T7N2 865 aaKnown RBP3.82□□□□□ -1.8
HMGB1P14-201ENST00000557424 LCE4AQ5TA78 99 aa3.82□□□□□ -1.8
HMGB1P14-201ENST00000557424 KIAA1841Q6NSI8 718 aa3.82□□□□□ -1.8
HMGB1P14-201ENST00000557424 MAATS1Q7Z4T9 603 aa3.82□□□□□ -1.8
HMGB1P14-201ENST00000557424 RALYLQ86SE5 291 aaKnown RBP3.82□□□□□ -1.8
HMGB1P14-201ENST00000557424 RASSF3Q86WH2 238 aa3.82□□□□□ -1.8
HMGB1P14-201ENST00000557424 RTKN2Q8IZC4 609 aa3.82□□□□□ -1.8
HMGB1P14-201ENST00000557424 MYCT1Q8N699 235 aa3.82□□□□□ -1.8
HMGB1P14-201ENST00000557424 RIN2Q8WYP3 895 aaPredicted RBP3.82□□□□□ -1.8
HMGB1P14-201ENST00000557424 ERCC4Q92889 916 aaPredicted RBP3.82□□□□□ -1.8
HMGB1P14-201ENST00000557424 PGBD4Q96DM1 585 aa3.82□□□□□ -1.8
HMGB1P14-201ENST00000557424 RIPOR3Q96MK2 946 aa3.82□□□□□ -1.8
HMGB1P14-201ENST00000557424 ELF4Q99607 663 aaPredicted RBP3.82□□□□□ -1.8
HMGB1P14-201ENST00000557424 LRFN3Q9BTN0 628 aa3.82□□□□□ -1.8
HMGB1P14-201ENST00000557424 CARD11Q9BXL7 1154 aa3.82□□□□□ -1.8
HMGB1P14-201ENST00000557424 B3GNT5Q9BYG0 378 aa3.82□□□□□ -1.8
HMGB1P14-201ENST00000557424 RRN3Q9NYV6 651 aa3.82□□□□□ -1.8
HMGB1P14-201ENST00000557424 GPRC5BQ9NZH0 403 aa3.82□□□□□ -1.8
HMGB1P14-201ENST00000557424 SAE1Q9UBE0 346 aaPredicted RBP3.82□□□□□ -1.8
HMGB1P14-201ENST00000557424 HDAC9Q9UKV0 1011 aa3.82□□□□□ -1.8
HMGB1P14-201ENST00000557424 EDARQ9UNE0 448 aa3.82□□□□□ -1.8
HMGB1P14-201ENST00000557424 A0A0G2JNJ9 132 aa3.81□□□□□ -1.8
HMGB1P14-201ENST00000557424 PRAMEF22A3QJZ6 481 aa3.81□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms