RNA–Protein interactions for RNA: ENST00000557358.1

VPS33B-206, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 4

Gene VPS33B, Length 561 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-206ENST00000557358 SLC39A14Q15043 492 aa15.21■□□□□ 0.03
VPS33B-206ENST00000557358 TCEAL5Q5H9L2 206 aa15.21■□□□□ 0.03
VPS33B-206ENST00000557358 CCDC73Q6ZRK6 1079 aa15.21■□□□□ 0.03
VPS33B-206ENST00000557358 GPBP1Q86WP2 473 aa15.21■□□□□ 0.03
VPS33B-206ENST00000557358 SPRYD3Q8NCJ5 442 aa15.21■□□□□ 0.03
VPS33B-206ENST00000557358 BSNDQ8WZ55 320 aa15.21■□□□□ 0.03
VPS33B-206ENST00000557358 ASB2Q96Q27 587 aa15.21■□□□□ 0.03
VPS33B-206ENST00000557358 RUSC1Q9BVN2 902 aa15.21■□□□□ 0.03
VPS33B-206ENST00000557358 MRPL4Q9BYD3 311 aaKnown RBP15.21■□□□□ 0.03
VPS33B-206ENST00000557358 TMEM134Q9H6X4 195 aa15.21■□□□□ 0.03
VPS33B-206ENST00000557358 NGRNQ9NPE2 291 aaKnown RBP15.21■□□□□ 0.03
VPS33B-206ENST00000557358 TBC1D13Q9NVG8 400 aa15.21■□□□□ 0.03
VPS33B-206ENST00000557358 STK17AQ9UEE5 414 aa15.21■□□□□ 0.03
VPS33B-206ENST00000557358 CFAP45Q9UL16 551 aa15.21■□□□□ 0.03
VPS33B-206ENST00000557358 ODF2LQ9ULJ1 636 aa15.21■□□□□ 0.03
VPS33B-206ENST00000557358 MORC2Q9Y6X9 1032 aaPredicted RBP15.21■□□□□ 0.03
VPS33B-206ENST00000557358 B4GALT5O43286 388 aa15.2■□□□□ 0.02
VPS33B-206ENST00000557358 FAM13AO94988 1023 aa15.2■□□□□ 0.02
VPS33B-206ENST00000557358 PLS3P13797 630 aa15.2■□□□□ 0.02
VPS33B-206ENST00000557358 PLCG1P19174 1290 aa15.2■□□□□ 0.02
VPS33B-206ENST00000557358 CA8P35219 290 aa15.2■□□□□ 0.02
VPS33B-206ENST00000557358 NPTX2P47972 431 aa15.2■□□□□ 0.02
VPS33B-206ENST00000557358 SLC12A3P55017 1021 aa15.2■□□□□ 0.02
VPS33B-206ENST00000557358 BCAR1P56945 870 aa15.2■□□□□ 0.02
VPS33B-206ENST00000557358 KARSQ15046 597 aaKnown RBP15.2■□□□□ 0.02
VPS33B-206ENST00000557358 PTPAQ15257 358 aa15.2■□□□□ 0.02
VPS33B-206ENST00000557358 AMHR2Q16671 573 aa15.2■□□□□ 0.02
VPS33B-206ENST00000557358 PUS10Q3MIT2 529 aaKnown RBP15.2■□□□□ 0.02
VPS33B-206ENST00000557358 UBXN11Q5T124 520 aa15.2■□□□□ 0.02
VPS33B-206ENST00000557358 RRAGBQ5VZM2 374 aa15.2■□□□□ 0.02
VPS33B-206ENST00000557358 ATL3Q6DD88 541 aa15.2■□□□□ 0.02
VPS33B-206ENST00000557358 FAM173BQ6P4H8 233 aa15.2■□□□□ 0.02
VPS33B-206ENST00000557358 AGMOQ6ZNB7 445 aa15.2■□□□□ 0.02
VPS33B-206ENST00000557358 LRRC55Q6ZSA7 311 aa15.2■□□□□ 0.02
VPS33B-206ENST00000557358 TMC7Q7Z402 723 aa15.2■□□□□ 0.02
VPS33B-206ENST00000557358 KCNK18Q7Z418 384 aa15.2■□□□□ 0.02
VPS33B-206ENST00000557358 LARP4BQ92615 738 aaKnown RBP15.2■□□□□ 0.02
VPS33B-206ENST00000557358 RAD54LQ92698 747 aa15.2■□□□□ 0.02
VPS33B-206ENST00000557358 USP28Q96RU2 1077 aa15.2■□□□□ 0.02
VPS33B-206ENST00000557358 TMEM175Q9BSA9 504 aa15.2■□□□□ 0.02
VPS33B-206ENST00000557358 TCHPQ9BT92 498 aa15.2■□□□□ 0.02
VPS33B-206ENST00000557358 EIF2AQ9BY44 585 aaKnown RBP15.2■□□□□ 0.02
VPS33B-206ENST00000557358 TLE6Q9H808 572 aa15.2■□□□□ 0.02
VPS33B-206ENST00000557358 UBE2ZQ9H832 354 aaPredicted RBP15.2■□□□□ 0.02
VPS33B-206ENST00000557358 PRDM6Q9NQX0 595 aa15.2■□□□□ 0.02
VPS33B-206ENST00000557358 ZMYM2Q9UBW7 1377 aa15.2■□□□□ 0.02
VPS33B-206ENST00000557358 PRUNE2Q8WUY3 3088 aa15.19■□□□□ 0.02
VPS33B-206ENST00000557358 ARL5CA6NH57 179 aa15.19■□□□□ 0.02
VPS33B-206ENST00000557358 SPTLC2O15270 562 aa15.19■□□□□ 0.02
VPS33B-206ENST00000557358 YEATS4O95619 227 aa15.19■□□□□ 0.02
VPS33B-206ENST00000557358 DDIT3P35638 169 aa15.19■□□□□ 0.02
VPS33B-206ENST00000557358 NASPP49321 788 aaPredicted RBP15.19■□□□□ 0.02
VPS33B-206ENST00000557358 RAD51AP2Q09MP3 1159 aa15.19■□□□□ 0.02
VPS33B-206ENST00000557358 GIT2Q14161 759 aa15.19■□□□□ 0.02
VPS33B-206ENST00000557358 ATF7IP2Q5U623 682 aa15.19■□□□□ 0.02
VPS33B-206ENST00000557358 FOXD4L5Q5VV16 416 aaPredicted RBP15.19■□□□□ 0.02
VPS33B-206ENST00000557358 SMG8Q8ND04 991 aaKnown RBP15.19■□□□□ 0.02
VPS33B-206ENST00000557358 SPIRE2Q8WWL2 714 aa15.19■□□□□ 0.02
VPS33B-206ENST00000557358 FOXD4L4Q8WXT5 416 aaPredicted RBP15.19■□□□□ 0.02
VPS33B-206ENST00000557358 PABPC5Q96DU9 382 aaKnown RBP15.19■□□□□ 0.02
VPS33B-206ENST00000557358 IPO9Q96P70 1041 aaKnown RBP15.19■□□□□ 0.02
VPS33B-206ENST00000557358 GAD1Q99259 594 aa15.19■□□□□ 0.02
VPS33B-206ENST00000557358 CDCA3Q99618 268 aaPredicted RBP15.19■□□□□ 0.02
VPS33B-206ENST00000557358 KIFC3Q9BVG8 833 aa15.19■□□□□ 0.02
VPS33B-206ENST00000557358 ZHX3Q9H4I2 956 aa15.19■□□□□ 0.02
VPS33B-206ENST00000557358 IGFLR1Q9H665 355 aa15.19■□□□□ 0.02
VPS33B-206ENST00000557358 POLD4Q9HCU8 107 aa15.19■□□□□ 0.02
VPS33B-206ENST00000557358 CLDND1Q9NY35 253 aa15.19■□□□□ 0.02
VPS33B-206ENST00000557358 FBXO2Q9UK22 296 aaPredicted RBP15.19■□□□□ 0.02
VPS33B-206ENST00000557358 FAN1Q9Y2M0 1017 aa15.19■□□□□ 0.02
VPS33B-206ENST00000557358 ATP6V1DQ9Y5K8 247 aa15.19■□□□□ 0.02
VPS33B-206ENST00000557358 BRWD1Q9NSI6 2320 aa15.18■□□□□ 0.02
VPS33B-206ENST00000557358 DLL1O00548 723 aa15.18■□□□□ 0.02
VPS33B-206ENST00000557358 SLC16A4O15374 487 aa15.18■□□□□ 0.02
VPS33B-206ENST00000557358 PPP6R2O75170 966 aa15.18■□□□□ 0.02
VPS33B-206ENST00000557358 F13A1P00488 732 aa15.18■□□□□ 0.02
VPS33B-206ENST00000557358 POMCP01189 267 aa15.18■□□□□ 0.02
VPS33B-206ENST00000557358 KCNA5P22460 613 aa15.18■□□□□ 0.02
VPS33B-206ENST00000557358 MLH1P40692 756 aa15.18■□□□□ 0.02
VPS33B-206ENST00000557358 STAT6P42226 847 aa15.18■□□□□ 0.02
VPS33B-206ENST00000557358 MATR3P43243 847 aaKnown RBP eCLIP15.18■□□□□ 0.02
VPS33B-206ENST00000557358 YARSP54577 528 aaKnown RBP15.18■□□□□ 0.02
VPS33B-206ENST00000557358 SMC1AQ14683 1233 aaKnown RBP15.18■□□□□ 0.02
VPS33B-206ENST00000557358 SV2BQ7L1I2 683 aa15.18■□□□□ 0.02
VPS33B-206ENST00000557358 SLC39A11Q8N1S5 342 aa15.18■□□□□ 0.02
VPS33B-206ENST00000557358 MYCT1Q8N699 235 aa15.18■□□□□ 0.02
VPS33B-206ENST00000557358 KCNG4Q8TDN1 519 aa15.18■□□□□ 0.02
VPS33B-206ENST00000557358 BICD1Q96G01 975 aa15.18■□□□□ 0.02
VPS33B-206ENST00000557358 EPSTI1Q96J88 318 aa15.18■□□□□ 0.02
VPS33B-206ENST00000557358 TCF25Q9BQ70 676 aa15.18■□□□□ 0.02
VPS33B-206ENST00000557358 CCDC94Q9BW85 323 aaPredicted RBP15.18■□□□□ 0.02
VPS33B-206ENST00000557358 LRRC27Q9C0I9 530 aa15.18■□□□□ 0.02
VPS33B-206ENST00000557358 CCDC113Q9H0I3 377 aa15.18■□□□□ 0.02
VPS33B-206ENST00000557358 NXF3Q9H4D5 531 aaKnown RBP15.18■□□□□ 0.02
VPS33B-206ENST00000557358 PDZD7Q9H5P4 517 aa15.18■□□□□ 0.02
VPS33B-206ENST00000557358 NRDE2Q9H7Z3 1164 aa15.18■□□□□ 0.02
VPS33B-206ENST00000557358 PARVGQ9HBI0 331 aa15.18■□□□□ 0.02
VPS33B-206ENST00000557358 TOPORSQ9NS56 1045 aaPredicted RBP15.18■□□□□ 0.02
VPS33B-206ENST00000557358 HCSTQ9UBK5 93 aa15.18■□□□□ 0.02
VPS33B-206ENST00000557358 HES2Q9Y543 173 aa15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms