RNA–Protein interactions for RNA: ENST00000557295.1

LINC00640-204, long intergenic non-protein coding RNA 640, humanhuman

TSL 5 BASIC

Gene LINC00640, Length 708 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00640-204ENST00000557295 WNT10AQ9GZT5 417 aa7.96□□□□□ -1.14
LINC00640-204ENST00000557295 NSUN3Q9H649 340 aaKnown RBP7.96□□□□□ -1.14
LINC00640-204ENST00000557295 MTMR4Q9NYA4 1195 aa7.96□□□□□ -1.14
LINC00640-204ENST00000557295 ADD3Q9UEY8 706 aaKnown RBP7.96□□□□□ -1.14
LINC00640-204ENST00000557295 ZFHX2Q9C0A1 2572 aaPredicted RBP7.96□□□□□ -1.14
LINC00640-204ENST00000557295 SMCHD1A6NHR9 2005 aa7.95□□□□□ -1.14
LINC00640-204ENST00000557295 TM4SF5O14894 197 aa7.95□□□□□ -1.14
LINC00640-204ENST00000557295 SMAD7O15105 426 aaKnown RBP7.95□□□□□ -1.14
LINC00640-204ENST00000557295 ATE1O95260 518 aa7.95□□□□□ -1.14
LINC00640-204ENST00000557295 TTLL1O95922 423 aa7.95□□□□□ -1.14
LINC00640-204ENST00000557295 CKBP12277 381 aa7.95□□□□□ -1.14
LINC00640-204ENST00000557295 ALAS1P13196 640 aa7.95□□□□□ -1.14
LINC00640-204ENST00000557295 GIPRP48546 466 aa7.95□□□□□ -1.14
LINC00640-204ENST00000557295 UBE3CQ15386 1083 aa7.95□□□□□ -1.14
LINC00640-204ENST00000557295 MUM1L1Q5H9M0 696 aa7.95□□□□□ -1.14
LINC00640-204ENST00000557295 SLFN13Q68D06 897 aa7.95□□□□□ -1.14
LINC00640-204ENST00000557295 HID1Q8IV36 788 aa7.95□□□□□ -1.14
LINC00640-204ENST00000557295 RNF214Q8ND24 703 aa7.95□□□□□ -1.14
LINC00640-204ENST00000557295 PPP1R13LQ8WUF5 828 aa7.95□□□□□ -1.14
LINC00640-204ENST00000557295 CHURC1Q8WUH1 139 aa7.95□□□□□ -1.14
LINC00640-204ENST00000557295 STAG1Q8WVM7 1258 aa7.95□□□□□ -1.14
LINC00640-204ENST00000557295 SHDQ96IW2 340 aa7.95□□□□□ -1.14
LINC00640-204ENST00000557295 FANCD2OSQ96PS1 177 aa7.95□□□□□ -1.14
LINC00640-204ENST00000557295 LNPKQ9C0E8 428 aa7.95□□□□□ -1.14
LINC00640-204ENST00000557295 DDX24Q9GZR7 859 aaKnown RBP eCLIP7.95□□□□□ -1.14
LINC00640-204ENST00000557295 MKNK2Q9HBH9 465 aa7.95□□□□□ -1.14
LINC00640-204ENST00000557295 ACTR10Q9NZ32 417 aa7.95□□□□□ -1.14
LINC00640-204ENST00000557295 CRIM1Q9NZV1 1036 aa7.95□□□□□ -1.14
LINC00640-204ENST00000557295 GMIPQ9P107 970 aa7.95□□□□□ -1.14
LINC00640-204ENST00000557295 TNNQ9UQP3 1299 aa7.95□□□□□ -1.14
LINC00640-204ENST00000557295 SLC4A4Q9Y6R1 1079 aa7.95□□□□□ -1.14
LINC00640-204ENST00000557295 CDK5RAP2Q96SN8 1893 aa7.95□□□□□ -1.14
LINC00640-204ENST00000557295 TMEM232C9JQI7 657 aa7.94□□□□□ -1.14
LINC00640-204ENST00000557295 F8W735 103 aaPredicted RBP7.94□□□□□ -1.14
LINC00640-204ENST00000557295 TMPRSS2O15393 492 aa7.94□□□□□ -1.14
LINC00640-204ENST00000557295 MBTPS2O43462 519 aa7.94□□□□□ -1.14
LINC00640-204ENST00000557295 ALX3O95076 343 aa7.94□□□□□ -1.14
LINC00640-204ENST00000557295 AMHP03971 560 aa7.94□□□□□ -1.14
LINC00640-204ENST00000557295 ALDH5A1P51649 535 aaPredicted RBP7.94□□□□□ -1.14
LINC00640-204ENST00000557295 SMAD4Q13485 552 aaKnown RBP7.94□□□□□ -1.14
LINC00640-204ENST00000557295 GPM6BQ13491 265 aa7.94□□□□□ -1.14
LINC00640-204ENST00000557295 PPP2R5BQ15173 497 aa7.94□□□□□ -1.14
LINC00640-204ENST00000557295 ZBTB37Q5TC79 503 aa7.94□□□□□ -1.14
LINC00640-204ENST00000557295 LARP1BQ659C4 914 aaKnown RBP7.94□□□□□ -1.14
LINC00640-204ENST00000557295 GIMAP6Q6P9H5 292 aa7.94□□□□□ -1.14
LINC00640-204ENST00000557295 RPAINQ86UA6 219 aa7.94□□□□□ -1.14
LINC00640-204ENST00000557295 PHACTR4Q8IZ21 702 aa7.94□□□□□ -1.14
LINC00640-204ENST00000557295 TMEM57Q8N5G2 664 aa7.94□□□□□ -1.14
LINC00640-204ENST00000557295 FAM13CQ8NE31 585 aa7.94□□□□□ -1.14
LINC00640-204ENST00000557295 SCFD2Q8WU76 684 aa7.94□□□□□ -1.14
LINC00640-204ENST00000557295 CEP95Q96GE4 821 aa7.94□□□□□ -1.14
LINC00640-204ENST00000557295 ZNF287Q9HBT7 754 aa7.94□□□□□ -1.14
LINC00640-204ENST00000557295 FAM86C1Q9NVL1 165 aa7.94□□□□□ -1.14
LINC00640-204ENST00000557295 PAG1Q9NWQ8 432 aa7.94□□□□□ -1.14
LINC00640-204ENST00000557295 CLDND1Q9NY35 253 aa7.94□□□□□ -1.14
LINC00640-204ENST00000557295 ADAM30Q9UKF2 790 aa7.94□□□□□ -1.14
LINC00640-204ENST00000557295 STXBP3O00186 592 aa7.93□□□□□ -1.14
LINC00640-204ENST00000557295 ITGB2P05107 769 aa7.93□□□□□ -1.14
LINC00640-204ENST00000557295 ICAM1P05362 532 aa7.93□□□□□ -1.14
LINC00640-204ENST00000557295 RAB6AP20340 208 aa7.93□□□□□ -1.14
LINC00640-204ENST00000557295 EDNRBP24530 442 aa7.93□□□□□ -1.14
LINC00640-204ENST00000557295 ZXDAP98168 799 aa7.93□□□□□ -1.14
LINC00640-204ENST00000557295 BAATQ14032 418 aaPredicted RBP7.93□□□□□ -1.14
LINC00640-204ENST00000557295 MBTPS1Q14703 1052 aa7.93□□□□□ -1.14
LINC00640-204ENST00000557295 CBX2Q14781 532 aaPredicted RBP7.93□□□□□ -1.14
LINC00640-204ENST00000557295 TRIM71Q2Q1W2 868 aaKnown RBP7.93□□□□□ -1.14
LINC00640-204ENST00000557295 HSP90AB4PQ58FF6 505 aa7.93□□□□□ -1.14
LINC00640-204ENST00000557295 NSMFQ6X4W1 530 aa7.93□□□□□ -1.14
LINC00640-204ENST00000557295 LIN28BQ6ZN17 250 aaKnown RBP eCLIP7.93□□□□□ -1.14
LINC00640-204ENST00000557295 EP400NLQ6ZTU2 488 aa7.93□□□□□ -1.14
LINC00640-204ENST00000557295 TMEM192Q8IY95 271 aa7.93□□□□□ -1.14
LINC00640-204ENST00000557295 HNRNPLLQ8WVV9 542 aaKnown RBP7.93□□□□□ -1.14
LINC00640-204ENST00000557295 TMEM40Q8WWA1 233 aa7.93□□□□□ -1.14
LINC00640-204ENST00000557295 ATOH1Q92858 354 aaPredicted RBP7.93□□□□□ -1.14
LINC00640-204ENST00000557295 TM9SF2Q99805 663 aa7.93□□□□□ -1.14
LINC00640-204ENST00000557295 OSBPL2Q9H1P3 480 aa7.93□□□□□ -1.14
LINC00640-204ENST00000557295 DISC1Q9NRI5 854 aa7.93□□□□□ -1.14
LINC00640-204ENST00000557295 COL4A4P53420 1690 aaPredicted RBP7.92□□□□□ -1.14
LINC00640-204ENST00000557295 C5orf42Q9H799 3197 aa7.92□□□□□ -1.14
LINC00640-204ENST00000557295 MYH1P12882 1939 aa7.92□□□□□ -1.14
LINC00640-204ENST00000557295 LOC730098B7Z3J9 87 aa7.92□□□□□ -1.14
LINC00640-204ENST00000557295 C5orf67F2Z3F1 127 aa7.92□□□□□ -1.14
LINC00640-204ENST00000557295 MSTNO14793 375 aa7.92□□□□□ -1.14
LINC00640-204ENST00000557295 EYA4O95677 639 aa7.92□□□□□ -1.14
LINC00640-204ENST00000557295 CHGBP05060 677 aa7.92□□□□□ -1.14
LINC00640-204ENST00000557295 TXNP10599 105 aaKnown RBP7.92□□□□□ -1.14
LINC00640-204ENST00000557295 ATP5JP18859 108 aa7.92□□□□□ -1.14
LINC00640-204ENST00000557295 SLC1A4P43007 532 aa7.92□□□□□ -1.14
LINC00640-204ENST00000557295 DLX2Q07687 328 aaPredicted RBP7.92□□□□□ -1.14
LINC00640-204ENST00000557295 SIGLEC14Q08ET2 396 aa7.92□□□□□ -1.14
LINC00640-204ENST00000557295 HYAL1Q12794 435 aa7.92□□□□□ -1.14
LINC00640-204ENST00000557295 IKQ13123 557 aaPredicted RBP7.92□□□□□ -1.14
LINC00640-204ENST00000557295 FXNQ16595 210 aa7.92□□□□□ -1.14
LINC00640-204ENST00000557295 CEP85Q6P2H3 762 aa7.92□□□□□ -1.14
LINC00640-204ENST00000557295 LSRQ86X29 649 aaPredicted RBP7.92□□□□□ -1.14
LINC00640-204ENST00000557295 SMYD4Q8IYR2 804 aaPredicted RBP7.92□□□□□ -1.14
LINC00640-204ENST00000557295 ZNF444Q8N0Y2 327 aaPredicted RBP7.92□□□□□ -1.14
LINC00640-204ENST00000557295 CLASRPQ8N2M8 674 aaKnown RBP7.92□□□□□ -1.14
LINC00640-204ENST00000557295 KAT2BQ92831 832 aa7.92□□□□□ -1.14
LINC00640-204ENST00000557295 FRAT1Q92837 279 aaPredicted RBP7.92□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms