RNA–Protein interactions for RNA: ENST00000556952.3

SIX4-203, Transcript of SIX homeobox 4, humanhuman

TSL 5

Gene SIX4, Length 1,573 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4-203ENST00000556952 HSPBP1Q9NZL4 362 aa25.94■■□□□ 1.74
SIX4-203ENST00000556952 ARMCX3Q9UH62 379 aaPredicted RBP25.94■■□□□ 1.74
SIX4-203ENST00000556952 TISP43B9A030 160 aa25.93■■□□□ 1.74
SIX4-203ENST00000556952 ANKRD63C9JTQ0 380 aa25.93■■□□□ 1.74
SIX4-203ENST00000556952 EXOC3O60645 756 aa25.93■■□□□ 1.74
SIX4-203ENST00000556952 PQBP1O60828 265 aaKnown RBP25.93■■□□□ 1.74
SIX4-203ENST00000556952 PRKCBP05771 671 aa25.93■■□□□ 1.74
SIX4-203ENST00000556952 GPC3P51654 580 aa25.93■■□□□ 1.74
SIX4-203ENST00000556952 TLE2Q04725 743 aa25.93■■□□□ 1.74
SIX4-203ENST00000556952 TAF2Q6P1X5 1199 aa25.93■■□□□ 1.74
SIX4-203ENST00000556952 SLC39A4Q6P5W5 647 aa25.93■■□□□ 1.74
SIX4-203ENST00000556952 VSTM4Q8IW00 320 aa25.93■■□□□ 1.74
SIX4-203ENST00000556952 FAM186BQ8IYM0 893 aa25.93■■□□□ 1.74
SIX4-203ENST00000556952 XXYLT1Q8NBI6 393 aa25.93■■□□□ 1.74
SIX4-203ENST00000556952 CBWD1Q9BRT8 395 aa25.93■■□□□ 1.74
SIX4-203ENST00000556952 IFT122Q9HBG6 1241 aa25.93■■□□□ 1.74
SIX4-203ENST00000556952 KIAA0391O15091 583 aaKnown RBP25.92■■□□□ 1.74
SIX4-203ENST00000556952 MAPK13O15264 365 aa25.92■■□□□ 1.74
SIX4-203ENST00000556952 TREHO43280 583 aa25.92■■□□□ 1.74
SIX4-203ENST00000556952 ADSSP30520 456 aa25.92■■□□□ 1.74
SIX4-203ENST00000556952 CASP4P49662 377 aa25.92■■□□□ 1.74
SIX4-203ENST00000556952 MBTD1Q05BQ5 628 aa25.92■■□□□ 1.74
SIX4-203ENST00000556952 HSP90AA2PQ14568 343 aaPredicted RBP25.92■■□□□ 1.74
SIX4-203ENST00000556952 VWA3BQ502W6 1294 aa25.92■■□□□ 1.74
SIX4-203ENST00000556952 MIIPQ5JXC2 388 aa25.92■■□□□ 1.74
SIX4-203ENST00000556952 SLFN12LQ6IEE8 588 aa25.92■■□□□ 1.74
SIX4-203ENST00000556952 FZD8Q9H461 694 aa25.92■■□□□ 1.74
SIX4-203ENST00000556952 PRMT7Q9NVM4 692 aaPredicted RBP25.92■■□□□ 1.74
SIX4-203ENST00000556952 STYXL1Q9Y6J8 313 aa25.92■■□□□ 1.74
SIX4-203ENST00000556952 A0A087WZ62 844 aa25.91■■□□□ 1.74
SIX4-203ENST00000556952 FAM187BQ17R55 369 aa25.91■■□□□ 1.74
SIX4-203ENST00000556952 RUFY4Q6ZNE9 571 aa25.91■■□□□ 1.74
SIX4-203ENST00000556952 SPC24Q8NBT2 197 aa25.91■■□□□ 1.74
SIX4-203ENST00000556952 NLRP7Q8WX94 980 aa25.91■■□□□ 1.74
SIX4-203ENST00000556952 POMGNT1Q8WZA1 660 aa25.91■■□□□ 1.74
SIX4-203ENST00000556952 FDXACB1Q9BRP7 624 aaPredicted RBP25.91■■□□□ 1.74
SIX4-203ENST00000556952 FAM49AQ9H0Q0 323 aaPredicted RBP25.91■■□□□ 1.74
SIX4-203ENST00000556952 IMPACTQ9P2X3 320 aa25.91■■□□□ 1.74
SIX4-203ENST00000556952 UTP18Q9Y5J1 556 aaKnown RBP eCLIP25.91■■□□□ 1.74
SIX4-203ENST00000556952 INO80B-WBP1J3KQ70 363 aa25.9■■□□□ 1.74
SIX4-203ENST00000556952 ACKR2O00590 384 aa25.9■■□□□ 1.74
SIX4-203ENST00000556952 TEX33O43247 280 aa25.9■■□□□ 1.74
SIX4-203ENST00000556952 RPLP2P05387 115 aaKnown RBP25.9■■□□□ 1.74
SIX4-203ENST00000556952 NLRP11P59045 1033 aaKnown RBP25.9■■□□□ 1.74
SIX4-203ENST00000556952 SRGAP1Q7Z6B7 1085 aa25.9■■□□□ 1.74
SIX4-203ENST00000556952 NME8Q8N427 588 aa25.9■■□□□ 1.74
SIX4-203ENST00000556952 PRIMPOLQ96LW4 560 aa25.9■■□□□ 1.74
SIX4-203ENST00000556952 SCLT1Q96NL6 688 aa25.9■■□□□ 1.74
SIX4-203ENST00000556952 INO80BQ9C086 356 aaPredicted RBP25.9■■□□□ 1.74
SIX4-203ENST00000556952 NDST4Q9H3R1 872 aa25.9■■□□□ 1.74
SIX4-203ENST00000556952 PCIF1Q9H4Z3 704 aa25.9■■□□□ 1.74
SIX4-203ENST00000556952 PES1O00541 588 aaKnown RBP25.9■■□□□ 1.74
SIX4-203ENST00000556952 PBX1P40424 430 aa25.9■■□□□ 1.74
SIX4-203ENST00000556952 UBXN1Q04323 297 aa25.9■■□□□ 1.74
SIX4-203ENST00000556952 PTPN11Q06124 597 aaPredicted RBP25.9■■□□□ 1.74
SIX4-203ENST00000556952 SPECC1LQ69YQ0 1117 aa25.9■■□□□ 1.74
SIX4-203ENST00000556952 ANKRD33Q7Z3H0 272 aa25.9■■□□□ 1.74
SIX4-203ENST00000556952 TMC6Q7Z403 805 aa25.9■■□□□ 1.74
SIX4-203ENST00000556952 FAM126BQ8IXS8 530 aa25.9■■□□□ 1.74
SIX4-203ENST00000556952 BORCS6Q96GS4 357 aa25.9■■□□□ 1.74
SIX4-203ENST00000556952 TARS2Q9BW92 718 aaKnown RBP25.9■■□□□ 1.74
SIX4-203ENST00000556952 ITIH6Q6UXX5 1313 aa25.89■■□□□ 1.74
SIX4-203ENST00000556952 LTBP2Q14767 1821 aa25.89■■□□□ 1.74
SIX4-203ENST00000556952 A0A1W2PQC6 194 aa25.89■■□□□ 1.73
SIX4-203ENST00000556952 PTMAP06454 111 aaKnown RBP25.89■■□□□ 1.73
SIX4-203ENST00000556952 ZNF200P98182 395 aaPredicted RBP25.89■■□□□ 1.73
SIX4-203ENST00000556952 FAM47CQ5HY64 1035 aa25.89■■□□□ 1.73
SIX4-203ENST00000556952 FKBP15Q5T1M5 1219 aa25.89■■□□□ 1.73
SIX4-203ENST00000556952 ZNF668Q96K58 619 aaPredicted RBP25.89■■□□□ 1.73
SIX4-203ENST00000556952 FBXL18Q96ME1 805 aa25.89■■□□□ 1.73
SIX4-203ENST00000556952 ADAMTS10Q9H324 1103 aa25.89■■□□□ 1.73
SIX4-203ENST00000556952 KIAA1586Q9HCI6 787 aa25.89■■□□□ 1.73
SIX4-203ENST00000556952 ZMYND8Q9ULU4 1186 aaPredicted RBP25.89■■□□□ 1.73
SIX4-203ENST00000556952 TOM1L1O75674 476 aa25.88■■□□□ 1.73
SIX4-203ENST00000556952 EDN1P05305 212 aa25.88■■□□□ 1.73
SIX4-203ENST00000556952 PRPF4BQ13523 1007 aaKnown RBP25.88■■□□□ 1.73
SIX4-203ENST00000556952 GDF6Q6KF10 455 aaPredicted RBP25.88■■□□□ 1.73
SIX4-203ENST00000556952 INTS8Q75QN2 995 aaKnown RBP25.88■■□□□ 1.73
SIX4-203ENST00000556952 DNAJB3Q8WWF6 145 aa25.88■■□□□ 1.73
SIX4-203ENST00000556952 ACO2Q99798 780 aaKnown RBP25.88■■□□□ 1.73
SIX4-203ENST00000556952 GPR32O75388 356 aa25.87■■□□□ 1.73
SIX4-203ENST00000556952 SYN1P17600 705 aa25.87■■□□□ 1.73
SIX4-203ENST00000556952 FAAP100Q0VG06 881 aa25.87■■□□□ 1.73
SIX4-203ENST00000556952 PCBP1Q15365 356 aaKnown RBP eCLIP25.87■■□□□ 1.73
SIX4-203ENST00000556952 TSHZ1Q6ZSZ6 1077 aa25.87■■□□□ 1.73
SIX4-203ENST00000556952 GPD1LQ8N335 351 aa25.87■■□□□ 1.73
SIX4-203ENST00000556952 TOX2Q96NM4 488 aa25.87■■□□□ 1.73
SIX4-203ENST00000556952 PPP1R16BQ96T49 567 aa25.87■■□□□ 1.73
SIX4-203ENST00000556952 GCOM2Q9BZD3 368 aaPredicted RBP25.87■■□□□ 1.73
SIX4-203ENST00000556952 MINDY3Q9H8M7 445 aa25.87■■□□□ 1.73
SIX4-203ENST00000556952 MROH7Q68CQ1 1323 aa25.87■■□□□ 1.73
SIX4-203ENST00000556952 CNTNAP2Q9UHC6 1331 aa25.87■■□□□ 1.73
SIX4-203ENST00000556952 LDHAP00338 332 aaKnown RBP25.86■■□□□ 1.73
SIX4-203ENST00000556952 SNRNP35Q16560 246 aaKnown RBP25.86■■□□□ 1.73
SIX4-203ENST00000556952 KIZQ2M2Z5 673 aa25.86■■□□□ 1.73
SIX4-203ENST00000556952 TRPV6Q9H1D0 765 aa25.86■■□□□ 1.73
SIX4-203ENST00000556952 TRMT13Q9NUP7 481 aaKnown RBP25.86■■□□□ 1.73
SIX4-203ENST00000556952 NR2E3Q9Y5X4 410 aa25.86■■□□□ 1.73
SIX4-203ENST00000556952 A0A0B4J269 797 aa25.86■■□□□ 1.73
SIX4-203ENST00000556952 B4GALT4O60513 344 aa25.86■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms