RNA–Protein interactions for RNA: ENST00000556909.1

VIPAS39-209, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 4

Gene VIPAS39, Length 540 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-209ENST00000556909 IPPQ9Y573 584 aa20.41■□□□□ 0.86
VIPAS39-209ENST00000556909 FAM205CA6NFA0 338 aa20.4■□□□□ 0.86
VIPAS39-209ENST00000556909 ZBTB39O15060 712 aa20.4■□□□□ 0.86
VIPAS39-209ENST00000556909 MARCH6O60337 910 aa20.4■□□□□ 0.86
VIPAS39-209ENST00000556909 TSPAN1O60635 241 aa20.4■□□□□ 0.86
VIPAS39-209ENST00000556909 ERLIN2O94905 339 aa20.4■□□□□ 0.86
VIPAS39-209ENST00000556909 URODP06132 367 aa20.4■□□□□ 0.86
VIPAS39-209ENST00000556909 ASTLQ6HA08 431 aaPredicted RBP20.4■□□□□ 0.86
VIPAS39-209ENST00000556909 CNNM3Q8NE01 707 aa20.4■□□□□ 0.86
VIPAS39-209ENST00000556909 EIF2AQ9BY44 585 aaKnown RBP20.4■□□□□ 0.86
VIPAS39-209ENST00000556909 UBN1Q9NPG3 1134 aa20.4■□□□□ 0.86
VIPAS39-209ENST00000556909 XPNPEP1Q9NQW7 623 aa20.4■□□□□ 0.86
VIPAS39-209ENST00000556909 C2CD2LO14523 706 aa20.39■□□□□ 0.85
VIPAS39-209ENST00000556909 INPPL1O15357 1258 aa20.39■□□□□ 0.85
VIPAS39-209ENST00000556909 PFKFB2O60825 505 aa20.39■□□□□ 0.85
VIPAS39-209ENST00000556909 ITGA4P13612 1032 aa20.39■□□□□ 0.85
VIPAS39-209ENST00000556909 MLH1P40692 756 aa20.39■□□□□ 0.85
VIPAS39-209ENST00000556909 NOTUMQ6P988 496 aa20.39■□□□□ 0.85
VIPAS39-209ENST00000556909 C15orf39Q6ZRI6 1047 aa20.39■□□□□ 0.85
VIPAS39-209ENST00000556909 OTOP3Q7RTS5 596 aa20.39■□□□□ 0.85
VIPAS39-209ENST00000556909 COLGALT2Q8IYK4 626 aa20.39■□□□□ 0.85
VIPAS39-209ENST00000556909 SLFN12Q8IYM2 578 aa20.39■□□□□ 0.85
VIPAS39-209ENST00000556909 CCDC51Q96ER9 411 aa20.39■□□□□ 0.85
VIPAS39-209ENST00000556909 RPS6KC1Q96S38 1066 aa20.39■□□□□ 0.85
VIPAS39-209ENST00000556909 MFSD1Q9H3U5 465 aa20.39■□□□□ 0.85
VIPAS39-209ENST00000556909 MAN1C1Q9NR34 630 aa20.39■□□□□ 0.85
VIPAS39-209ENST00000556909 TPCN1Q9ULQ1 816 aa20.39■□□□□ 0.85
VIPAS39-209ENST00000556909 ARL5CA6NH57 179 aa20.38■□□□□ 0.85
VIPAS39-209ENST00000556909 CTDNEP1O95476 244 aa20.38■□□□□ 0.85
VIPAS39-209ENST00000556909 AXLP30530 894 aa20.38■□□□□ 0.85
VIPAS39-209ENST00000556909 OR1G1P47890 313 aa20.38■□□□□ 0.85
VIPAS39-209ENST00000556909 AK2P54819 239 aa20.38■□□□□ 0.85
VIPAS39-209ENST00000556909 PTENP60484 403 aa20.38■□□□□ 0.85
VIPAS39-209ENST00000556909 DSC1Q08554 894 aa20.38■□□□□ 0.85
VIPAS39-209ENST00000556909 MXD4Q14582 209 aaPredicted RBP20.38■□□□□ 0.85
VIPAS39-209ENST00000556909 PCBP1Q15365 356 aaKnown RBP eCLIP20.38■□□□□ 0.85
VIPAS39-209ENST00000556909 CWF19L1Q69YN2 538 aaKnown RBP20.38■□□□□ 0.85
VIPAS39-209ENST00000556909 TAS1R1Q7RTX1 841 aa20.38■□□□□ 0.85
VIPAS39-209ENST00000556909 IFNLR1Q8IU57 520 aaPredicted RBP20.38■□□□□ 0.85
VIPAS39-209ENST00000556909 RNF168Q8IYW5 571 aaPredicted RBP20.38■□□□□ 0.85
VIPAS39-209ENST00000556909 CPB2Q96IY4 423 aa20.38■□□□□ 0.85
VIPAS39-209ENST00000556909 GAD1Q99259 594 aa20.38■□□□□ 0.85
VIPAS39-209ENST00000556909 RNF39Q9H2S5 420 aa20.38■□□□□ 0.85
VIPAS39-209ENST00000556909 HES2Q9Y543 173 aa20.38■□□□□ 0.85
VIPAS39-209ENST00000556909 RIF1Q5UIP0 2472 aaKnown RBP20.37■□□□□ 0.85
VIPAS39-209ENST00000556909 FAM186AA6NE01 2351 aa20.37■□□□□ 0.85
VIPAS39-209ENST00000556909 PROB1E7EW31 1015 aa20.37■□□□□ 0.85
VIPAS39-209ENST00000556909 SLITRK3O94933 977 aa20.37■□□□□ 0.85
VIPAS39-209ENST00000556909 BAG4O95429 457 aaKnown RBP20.37■□□□□ 0.85
VIPAS39-209ENST00000556909 EFEMP2O95967 443 aa20.37■□□□□ 0.85
VIPAS39-209ENST00000556909 ADH1AP07327 375 aa20.37■□□□□ 0.85
VIPAS39-209ENST00000556909 SCNN1GP51170 649 aa20.37■□□□□ 0.85
VIPAS39-209ENST00000556909 CLCN5P51795 746 aa20.37■□□□□ 0.85
VIPAS39-209ENST00000556909 MBTD1Q05BQ5 628 aa20.37■□□□□ 0.85
VIPAS39-209ENST00000556909 NR5A1Q13285 461 aa20.37■□□□□ 0.85
VIPAS39-209ENST00000556909 TDGQ13569 410 aa20.37■□□□□ 0.85
VIPAS39-209ENST00000556909 CAPSQ13938 189 aa20.37■□□□□ 0.85
VIPAS39-209ENST00000556909 TPH2Q8IWU9 490 aa20.37■□□□□ 0.85
VIPAS39-209ENST00000556909 CMASQ8NFW8 434 aaPredicted RBP20.37■□□□□ 0.85
VIPAS39-209ENST00000556909 ASAP3Q8TDY4 903 aa20.37■□□□□ 0.85
VIPAS39-209ENST00000556909 TNFRSF25Q93038 417 aa20.37■□□□□ 0.85
VIPAS39-209ENST00000556909 ZFP42Q96MM3 310 aa20.37■□□□□ 0.85
VIPAS39-209ENST00000556909 ORC3Q9UBD5 711 aaPredicted RBP20.37■□□□□ 0.85
VIPAS39-209ENST00000556909 DUSP12Q9UNI6 340 aa20.37■□□□□ 0.85
VIPAS39-209ENST00000556909 SSX2IPQ9Y2D8 614 aa20.37■□□□□ 0.85
VIPAS39-209ENST00000556909 SPTBN4Q9H254 2564 aa20.37■□□□□ 0.85
VIPAS39-209ENST00000556909 F8W810 466 aa20.36■□□□□ 0.85
VIPAS39-209ENST00000556909 INO80B-WBP1J3KQ70 363 aa20.36■□□□□ 0.85
VIPAS39-209ENST00000556909 TEX28O15482 410 aa20.36■□□□□ 0.85
VIPAS39-209ENST00000556909 KRT2P35908 639 aa20.36■□□□□ 0.85
VIPAS39-209ENST00000556909 GLUD2P49448 558 aa20.36■□□□□ 0.85
VIPAS39-209ENST00000556909 TFDP1Q14186 410 aa20.36■□□□□ 0.85
VIPAS39-209ENST00000556909 AMHR2Q16671 573 aa20.36■□□□□ 0.85
VIPAS39-209ENST00000556909 EIF2AK1Q9BQI3 630 aaKnown RBP20.36■□□□□ 0.85
VIPAS39-209ENST00000556909 CSRNP2Q9H175 543 aa20.36■□□□□ 0.85
VIPAS39-209ENST00000556909 KCNK12Q9HB15 430 aa20.36■□□□□ 0.85
VIPAS39-209ENST00000556909 MIOSQ9NXC5 875 aa20.36■□□□□ 0.85
VIPAS39-209ENST00000556909 PTPRZ1P23471 2315 aaPredicted RBP20.36■□□□□ 0.85
VIPAS39-209ENST00000556909 LYPLA2O95372 231 aa20.35■□□□□ 0.85
VIPAS39-209ENST00000556909 GLUD1P00367 558 aa20.35■□□□□ 0.85
VIPAS39-209ENST00000556909 POU5F1BQ06416 359 aa20.35■□□□□ 0.85
VIPAS39-209ENST00000556909 KIAA0319Q5VV43 1072 aa20.35■□□□□ 0.85
VIPAS39-209ENST00000556909 FLCNQ8NFG4 579 aa20.35■□□□□ 0.85
VIPAS39-209ENST00000556909 WASF1Q92558 559 aa20.35■□□□□ 0.85
VIPAS39-209ENST00000556909 APOL6Q9BWW8 343 aa20.35■□□□□ 0.85
VIPAS39-209ENST00000556909 RHOBTB2Q9BYZ6 727 aa20.35■□□□□ 0.85
VIPAS39-209ENST00000556909 NXF3Q9H4D5 531 aaKnown RBP20.35■□□□□ 0.85
VIPAS39-209ENST00000556909 RXFP1Q9HBX9 757 aa20.35■□□□□ 0.85
VIPAS39-209ENST00000556909 CCDC195A0A1B0GUA6 201 aa20.34■□□□□ 0.85
VIPAS39-209ENST00000556909 N4BP1O75113 896 aaKnown RBP20.34■□□□□ 0.85
VIPAS39-209ENST00000556909 DGAT1O75907 488 aa20.34■□□□□ 0.85
VIPAS39-209ENST00000556909 ARF4P18085 180 aaPredicted RBP20.34■□□□□ 0.85
VIPAS39-209ENST00000556909 ARL2P36404 184 aa20.34■□□□□ 0.85
VIPAS39-209ENST00000556909 NBL1P41271 181 aa20.34■□□□□ 0.85
VIPAS39-209ENST00000556909 DSG1Q02413 1049 aa20.34■□□□□ 0.85
VIPAS39-209ENST00000556909 NCBP1Q09161 790 aaKnown RBP20.34■□□□□ 0.85
VIPAS39-209ENST00000556909 ASCL5Q7RTU5 278 aa20.34■□□□□ 0.85
VIPAS39-209ENST00000556909 HSD17B14Q9BPX1 270 aa20.34■□□□□ 0.85
VIPAS39-209ENST00000556909 NFKBIZQ9BYH8 718 aa20.34■□□□□ 0.85
VIPAS39-209ENST00000556909 TRIM6Q9C030 488 aaPredicted RBP20.34■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms