RNA–Protein interactions for RNA: ENST00000556768.5

SCFD1-222, Transcript of sec1 family domain containing 1, humanhuman

TSL 1 (best)

Gene SCFD1, Length 1,829 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-222ENST00000556768 ZSCAN21Q9Y5A6 473 aaPredicted RBP8.14□□□□□ -1.11
SCFD1-222ENST00000556768 POTEMA6NI47 508 aa8.13□□□□□ -1.11
SCFD1-222ENST00000556768 INO80B-WBP1J3KQ70 363 aa8.13□□□□□ -1.11
SCFD1-222ENST00000556768 LAD1O00515 517 aa8.13□□□□□ -1.11
SCFD1-222ENST00000556768 ZBTB39O15060 712 aa8.13□□□□□ -1.11
SCFD1-222ENST00000556768 ZNF623O75123 536 aa8.13□□□□□ -1.11
SCFD1-222ENST00000556768 NR1I2O75469 434 aa8.13□□□□□ -1.11
SCFD1-222ENST00000556768 AXLP30530 894 aa8.13□□□□□ -1.11
SCFD1-222ENST00000556768 PLCB3Q01970 1234 aa8.13□□□□□ -1.11
SCFD1-222ENST00000556768 POU5F1BQ06416 359 aa8.13□□□□□ -1.11
SCFD1-222ENST00000556768 PDIA5Q14554 519 aa8.13□□□□□ -1.11
SCFD1-222ENST00000556768 NOTUMQ6P988 496 aa8.13□□□□□ -1.11
SCFD1-222ENST00000556768 RBM23Q86U06 439 aaKnown RBP8.13□□□□□ -1.11
SCFD1-222ENST00000556768 COLGALT1Q8NBJ5 622 aa8.13□□□□□ -1.11
SCFD1-222ENST00000556768 HELQQ8TDG4 1101 aa8.13□□□□□ -1.11
SCFD1-222ENST00000556768 TMEM169Q96HH4 297 aa8.13□□□□□ -1.11
SCFD1-222ENST00000556768 POP1Q99575 1024 aaKnown RBP8.13□□□□□ -1.11
SCFD1-222ENST00000556768 CDCA3Q99618 268 aaPredicted RBP8.13□□□□□ -1.11
SCFD1-222ENST00000556768 KIF2CQ99661 725 aa8.13□□□□□ -1.11
SCFD1-222ENST00000556768 C1QTNF1Q9BXJ1 281 aa8.13□□□□□ -1.11
SCFD1-222ENST00000556768 AGPAT5Q9NUQ2 364 aa8.13□□□□□ -1.11
SCFD1-222ENST00000556768 LRWD1Q9UFC0 647 aa8.13□□□□□ -1.11
SCFD1-222ENST00000556768 PCDHB2Q9Y5E7 798 aa8.13□□□□□ -1.11
SCFD1-222ENST00000556768 NCOR1O75376 2440 aa8.13□□□□□ -1.11
SCFD1-222ENST00000556768 ARHGEF35A5YM69 484 aa8.13□□□□□ -1.11
SCFD1-222ENST00000556768 ZC3H11AO75152 810 aaKnown RBP eCLIP8.13□□□□□ -1.11
SCFD1-222ENST00000556768 ALDH2P05091 517 aa8.13□□□□□ -1.11
SCFD1-222ENST00000556768 MUTP22033 750 aa8.13□□□□□ -1.11
SCFD1-222ENST00000556768 U2AF2P26368 475 aaKnown RBP eCLIP8.13□□□□□ -1.112e-8■■■■□ 20.1
SCFD1-222ENST00000556768 RPA1P27694 616 aa8.13□□□□□ -1.11
SCFD1-222ENST00000556768 CA8P35219 290 aa8.13□□□□□ -1.11
SCFD1-222ENST00000556768 NRIP1P48552 1158 aa8.13□□□□□ -1.11
SCFD1-222ENST00000556768 RARRES1P49788 294 aa8.13□□□□□ -1.11
SCFD1-222ENST00000556768 HYAL1Q12794 435 aa8.13□□□□□ -1.11
SCFD1-222ENST00000556768 NOMO2Q5JPE7 1267 aa8.13□□□□□ -1.11
SCFD1-222ENST00000556768 CATSPER3Q86XQ3 398 aa8.13□□□□□ -1.11
SCFD1-222ENST00000556768 GJD3Q8N144 294 aa8.13□□□□□ -1.11
SCFD1-222ENST00000556768 GADD45GIP1Q8TAE8 222 aaPredicted RBP8.13□□□□□ -1.11
SCFD1-222ENST00000556768 MRPS27Q92552 414 aaKnown RBP8.13□□□□□ -1.11
SCFD1-222ENST00000556768 CCDC51Q96ER9 411 aa8.13□□□□□ -1.11
SCFD1-222ENST00000556768 TCF25Q9BQ70 676 aa8.13□□□□□ -1.11
SCFD1-222ENST00000556768 POLR3CQ9BUI4 534 aaPredicted RBP8.13□□□□□ -1.11
SCFD1-222ENST00000556768 TMEM60Q9H2L4 133 aa8.13□□□□□ -1.11
SCFD1-222ENST00000556768 PRKAG3Q9UGI9 489 aa8.13□□□□□ -1.11
SCFD1-222ENST00000556768 DBR1Q9UK59 544 aaKnown RBP8.13□□□□□ -1.11
SCFD1-222ENST00000556768 ZMIZ1Q9ULJ6 1067 aa8.13□□□□□ -1.11
SCFD1-222ENST00000556768 SMC3Q9UQE7 1217 aa8.13□□□□□ -1.11
SCFD1-222ENST00000556768 INPP5FQ9Y2H2 1132 aa8.13□□□□□ -1.11
SCFD1-222ENST00000556768 DOCK5Q9H7D0 1870 aa8.12□□□□□ -1.11
SCFD1-222ENST00000556768 CNTNAP2Q9UHC6 1331 aa8.12□□□□□ -1.11
SCFD1-222ENST00000556768 COL4A6Q14031 1691 aa8.12□□□□□ -1.11
SCFD1-222ENST00000556768 LRRIQ4A6NIV6 560 aa8.12□□□□□ -1.11
SCFD1-222ENST00000556768 USO1O60763 962 aaKnown RBP8.12□□□□□ -1.11
SCFD1-222ENST00000556768 CCT6AP40227 531 aaKnown RBP8.12□□□□□ -1.11
SCFD1-222ENST00000556768 PTENP60484 403 aa8.12□□□□□ -1.11
SCFD1-222ENST00000556768 ST3GAL1Q11201 340 aa8.12□□□□□ -1.11
SCFD1-222ENST00000556768 CAMK1Q14012 370 aa8.12□□□□□ -1.11
SCFD1-222ENST00000556768 PPP2R5AQ15172 486 aa8.12□□□□□ -1.11
SCFD1-222ENST00000556768 CTC1Q2NKJ3 1217 aa8.12□□□□□ -1.11
SCFD1-222ENST00000556768 LONRF3Q496Y0 759 aa8.12□□□□□ -1.11
SCFD1-222ENST00000556768 RILPL1Q5EBL4 403 aa8.12□□□□□ -1.11
SCFD1-222ENST00000556768 CLLU1OSQ5K130 101 aa8.12□□□□□ -1.11
SCFD1-222ENST00000556768 SWT1Q5T5J6 900 aaKnown RBP8.12□□□□□ -1.11
SCFD1-222ENST00000556768 KRT79Q5XKE5 535 aa8.12□□□□□ -1.11
SCFD1-222ENST00000556768 DTHD1Q6ZMT9 781 aa8.12□□□□□ -1.11
SCFD1-222ENST00000556768 MAEAQ7L5Y9 396 aa8.12□□□□□ -1.11
SCFD1-222ENST00000556768 ZNF598Q86UK7 904 aaKnown RBP8.12□□□□□ -1.11
SCFD1-222ENST00000556768 ZBTB8OSQ8IWT0 167 aa8.12□□□□□ -1.11
SCFD1-222ENST00000556768 EFHBQ8N7U6 833 aa8.12□□□□□ -1.11
SCFD1-222ENST00000556768 TMX3Q96JJ7 454 aa8.12□□□□□ -1.11
SCFD1-222ENST00000556768 IFT74Q96LB3 600 aa8.12□□□□□ -1.11
SCFD1-222ENST00000556768 NECAB3Q96P71 396 aaPredicted RBP8.12□□□□□ -1.11
SCFD1-222ENST00000556768 NFKBIZQ9BYH8 718 aa8.12□□□□□ -1.11
SCFD1-222ENST00000556768 CWH43Q9H720 699 aa8.12□□□□□ -1.11
SCFD1-222ENST00000556768 DNM3Q9UQ16 869 aa8.12□□□□□ -1.11
SCFD1-222ENST00000556768 TTC3P53804 2025 aa8.11□□□□□ -1.11
SCFD1-222ENST00000556768 ITGA4P13612 1032 aa8.11□□□□□ -1.11
SCFD1-222ENST00000556768 ALADP13716 330 aa8.11□□□□□ -1.11
SCFD1-222ENST00000556768 DNAJB1P25685 340 aa8.11□□□□□ -1.11
SCFD1-222ENST00000556768 IRS1P35568 1242 aa8.11□□□□□ -1.11
SCFD1-222ENST00000556768 ARL2P36404 184 aa8.11□□□□□ -1.11
SCFD1-222ENST00000556768 BCAR1P56945 870 aa8.11□□□□□ -1.11
SCFD1-222ENST00000556768 ADAM15Q13444 863 aa8.11□□□□□ -1.11
SCFD1-222ENST00000556768 GIT2Q14161 759 aa8.11□□□□□ -1.11
SCFD1-222ENST00000556768 SMC1AQ14683 1233 aaKnown RBP8.11□□□□□ -1.11
SCFD1-222ENST00000556768 COL19A1Q14993 1142 aa8.11□□□□□ -1.11
SCFD1-222ENST00000556768 TMEM164Q5U3C3 297 aa8.11□□□□□ -1.11
SCFD1-222ENST00000556768 LRRC55Q6ZSA7 311 aa8.11□□□□□ -1.11
SCFD1-222ENST00000556768 FAM178BQ8IXR5 827 aa8.11□□□□□ -1.11
SCFD1-222ENST00000556768 LPPQ93052 612 aa8.11□□□□□ -1.11
SCFD1-222ENST00000556768 GBP3Q9H0R5 595 aa8.11□□□□□ -1.11
SCFD1-222ENST00000556768 C2orf40Q9H1Z8 148 aa8.11□□□□□ -1.11
SCFD1-222ENST00000556768 RSAD1Q9HA92 442 aa8.11□□□□□ -1.11
SCFD1-222ENST00000556768 CD207Q9UJ71 328 aa8.11□□□□□ -1.11
SCFD1-222ENST00000556768 C5orf42Q9H799 3197 aa8.11□□□□□ -1.11
SCFD1-222ENST00000556768 MICAL3Q7RTP6 2002 aa8.11□□□□□ -1.11
SCFD1-222ENST00000556768 WNT7AO00755 349 aa8.1□□□□□ -1.11
SCFD1-222ENST00000556768 PER2O15055 1255 aa8.1□□□□□ -1.11
SCFD1-222ENST00000556768 CXCL14O95715 111 aa8.1□□□□□ -1.11
SCFD1-222ENST00000556768 SPATA31C1P0DKV0 1188 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms