RNA–Protein interactions for RNA: ENST00000556303.1

SNX6-207, Transcript of sorting nexin 6, humanhuman

TSL 2

Gene SNX6, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-207ENST00000556303 CLUL1Q15846 466 aa13.96□□□□□ -0.17
SNX6-207ENST00000556303 TPRNQ4KMQ1 711 aa13.96□□□□□ -0.17
SNX6-207ENST00000556303 TMEM31Q5JXX7 168 aa13.96□□□□□ -0.17
SNX6-207ENST00000556303 KRT79Q5XKE5 535 aa13.96□□□□□ -0.17
SNX6-207ENST00000556303 ANKRD54Q6NXT1 300 aa13.96□□□□□ -0.17
SNX6-207ENST00000556303 SUSD6Q92537 303 aa13.96□□□□□ -0.17
SNX6-207ENST00000556303 KIFAP3Q92845 792 aa13.96□□□□□ -0.17
SNX6-207ENST00000556303 TBC1D32Q96NH3 1257 aa13.96□□□□□ -0.17
SNX6-207ENST00000556303 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.96□□□□□ -0.17
SNX6-207ENST00000556303 BARX2Q9UMQ3 279 aaPredicted RBP13.96□□□□□ -0.17
SNX6-207ENST00000556303 SSX2IPQ9Y2D8 614 aa13.96□□□□□ -0.17
SNX6-207ENST00000556303 FAN1Q9Y2M0 1017 aa13.96□□□□□ -0.17
SNX6-207ENST00000556303 ARIH1Q9Y4X5 557 aaPredicted RBP13.96□□□□□ -0.17
SNX6-207ENST00000556303 ARL5CA6NH57 179 aa13.95□□□□□ -0.18
SNX6-207ENST00000556303 LRRIQ4A6NIV6 560 aa13.95□□□□□ -0.18
SNX6-207ENST00000556303 NT5C1B-RDH14C9J2C7 533 aa13.95□□□□□ -0.18
SNX6-207ENST00000556303 DCXO43602 365 aa13.95□□□□□ -0.18
SNX6-207ENST00000556303 NR1I2O75469 434 aa13.95□□□□□ -0.18
SNX6-207ENST00000556303 CXCL14O95715 111 aa13.95□□□□□ -0.18
SNX6-207ENST00000556303 COL9A1P20849 921 aa13.95□□□□□ -0.18
SNX6-207ENST00000556303 CCT6AP40227 531 aaKnown RBP13.95□□□□□ -0.18
SNX6-207ENST00000556303 NAMPTP43490 491 aa13.95□□□□□ -0.18
SNX6-207ENST00000556303 SLC11A1P49279 550 aa13.95□□□□□ -0.18
SNX6-207ENST00000556303 EFNA5P52803 228 aa13.95□□□□□ -0.18
SNX6-207ENST00000556303 ITIH3Q06033 890 aa13.95□□□□□ -0.18
SNX6-207ENST00000556303 CBX2Q14781 532 aaPredicted RBP13.95□□□□□ -0.18
SNX6-207ENST00000556303 MAPK6Q16659 721 aa13.95□□□□□ -0.18
SNX6-207ENST00000556303 LONRF3Q496Y0 759 aa13.95□□□□□ -0.18
SNX6-207ENST00000556303 POTEGQ6S5H5 508 aa13.95□□□□□ -0.18
SNX6-207ENST00000556303 DTHD1Q6ZMT9 781 aa13.95□□□□□ -0.18
SNX6-207ENST00000556303 PPFIBP1Q86W92 1011 aa13.95□□□□□ -0.18
SNX6-207ENST00000556303 ZNF280BQ86YH2 543 aa13.95□□□□□ -0.18
SNX6-207ENST00000556303 TMEM87AQ8NBN3 555 aa13.95□□□□□ -0.18
SNX6-207ENST00000556303 VN1R2Q8NFZ6 395 aa13.95□□□□□ -0.18
SNX6-207ENST00000556303 IFT74Q96LB3 600 aa13.95□□□□□ -0.18
SNX6-207ENST00000556303 PHF7Q9BWX1 381 aaPredicted RBP13.95□□□□□ -0.18
SNX6-207ENST00000556303 EIF2AQ9BY44 585 aaKnown RBP13.95□□□□□ -0.18
SNX6-207ENST00000556303 S1PR5Q9H228 398 aa13.95□□□□□ -0.18
SNX6-207ENST00000556303 KCNG1Q9UIX4 513 aa13.95□□□□□ -0.18
SNX6-207ENST00000556303 DNM3Q9UQ16 869 aa13.95□□□□□ -0.18
SNX6-207ENST00000556303 USP15Q9Y4E8 981 aaPredicted RBP13.95□□□□□ -0.18
SNX6-207ENST00000556303 PCDHB6Q9Y5E3 794 aa13.95□□□□□ -0.18
SNX6-207ENST00000556303 PHLPP2Q6ZVD8 1323 aa13.94□□□□□ -0.18
SNX6-207ENST00000556303 LOC730098B7Z3J9 87 aa13.94□□□□□ -0.18
SNX6-207ENST00000556303 H3BQV1 296 aa13.94□□□□□ -0.18
SNX6-207ENST00000556303 ACKR2O00590 384 aa13.94□□□□□ -0.18
SNX6-207ENST00000556303 N4BP3O15049 544 aa13.94□□□□□ -0.18
SNX6-207ENST00000556303 DDHD2O94830 711 aa13.94□□□□□ -0.18
SNX6-207ENST00000556303 C1RP00736 705 aa13.94□□□□□ -0.18
SNX6-207ENST00000556303 DSC1Q08554 894 aa13.94□□□□□ -0.18
SNX6-207ENST00000556303 ARL6IP4Q66PJ3 421 aaKnown RBP13.94□□□□□ -0.18
SNX6-207ENST00000556303 COLGALT2Q8IYK4 626 aa13.94□□□□□ -0.18
SNX6-207ENST00000556303 GPR65Q8IYL9 337 aa13.94□□□□□ -0.18
SNX6-207ENST00000556303 KHSRPQ92945 711 aaKnown RBP eCLIP13.94□□□□□ -0.18
SNX6-207ENST00000556303 CPB2Q96IY4 423 aa13.94□□□□□ -0.18
SNX6-207ENST00000556303 NECTIN4Q96NY8 510 aa13.94□□□□□ -0.18
SNX6-207ENST00000556303 TIPINQ9BVW5 301 aa13.94□□□□□ -0.18
SNX6-207ENST00000556303 GBP3Q9H0R5 595 aa13.94□□□□□ -0.18
SNX6-207ENST00000556303 BHMT2Q9H2M3 363 aa13.94□□□□□ -0.18
SNX6-207ENST00000556303 C17orf75Q9HAS0 396 aa13.94□□□□□ -0.18
SNX6-207ENST00000556303 GPRC5CQ9NQ84 441 aa13.94□□□□□ -0.18
SNX6-207ENST00000556303 DZANK1Q9NVP4 752 aa13.94□□□□□ -0.18
SNX6-207ENST00000556303 DNAJB4Q9UDY4 337 aa13.94□□□□□ -0.18
SNX6-207ENST00000556303 KIAA1024Q9UPX6 916 aa13.94□□□□□ -0.18
SNX6-207ENST00000556303 HCFC2Q9Y5Z7 792 aa13.94□□□□□ -0.18
SNX6-207ENST00000556303 A0A087WWV3 80 aa13.93□□□□□ -0.18
SNX6-207ENST00000556303 PRR33A8MZF0 331 aa13.93□□□□□ -0.18
SNX6-207ENST00000556303 NRP1O14786 923 aa13.93□□□□□ -0.18
SNX6-207ENST00000556303 SLC26A4O43511 780 aa13.93□□□□□ -0.18
SNX6-207ENST00000556303 CLASP2O75122 1294 aaKnown RBP13.93□□□□□ -0.18
SNX6-207ENST00000556303 POMCP01189 267 aa13.93□□□□□ -0.18
SNX6-207ENST00000556303 GJB2P29033 226 aa13.93□□□□□ -0.18
SNX6-207ENST00000556303 AFF1P51825 1210 aaKnown RBP13.93□□□□□ -0.18
SNX6-207ENST00000556303 NBR1Q14596 966 aa13.93□□□□□ -0.18
SNX6-207ENST00000556303 ECM1Q16610 540 aa13.93□□□□□ -0.18
SNX6-207ENST00000556303 HERC4Q5GLZ8 1057 aaPredicted RBP13.93□□□□□ -0.18
SNX6-207ENST00000556303 MCTP1Q6DN14 999 aa13.93□□□□□ -0.18
SNX6-207ENST00000556303 CES5AQ6NT32 575 aa13.93□□□□□ -0.18
SNX6-207ENST00000556303 SYCE2Q6PIF2 218 aa13.93□□□□□ -0.18
SNX6-207ENST00000556303 MAEAQ7L5Y9 396 aa13.93□□□□□ -0.18
SNX6-207ENST00000556303 APBB1IPQ7Z5R6 666 aaPredicted RBP13.93□□□□□ -0.18
SNX6-207ENST00000556303 TMEM173Q86WV6 379 aaPredicted RBP13.93□□□□□ -0.18
SNX6-207ENST00000556303 DEPTORQ8TB45 409 aa13.93□□□□□ -0.18
SNX6-207ENST00000556303 SNX29Q8TEQ0 813 aa13.93□□□□□ -0.18
SNX6-207ENST00000556303 GAD1Q99259 594 aa13.93□□□□□ -0.18
SNX6-207ENST00000556303 ADPGKQ9BRR6 497 aa13.93□□□□□ -0.18
SNX6-207ENST00000556303 LRFN3Q9BTN0 628 aa13.93□□□□□ -0.18
SNX6-207ENST00000556303 EMILIN2Q9BXX0 1053 aa13.93□□□□□ -0.18
SNX6-207ENST00000556303 DDX19AQ9NUU7 478 aaKnown RBP13.93□□□□□ -0.18
SNX6-207ENST00000556303 SMC3Q9UQE7 1217 aa13.93□□□□□ -0.18
SNX6-207ENST00000556303 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.92□□□□□ -0.18
SNX6-207ENST00000556303 LILRB3O75022 631 aa13.92□□□□□ -0.18
SNX6-207ENST00000556303 SOD2P04179 222 aa13.92□□□□□ -0.18
SNX6-207ENST00000556303 ATP2C1P98194 919 aaPredicted RBP13.92□□□□□ -0.18
SNX6-207ENST00000556303 PRPF4BQ13523 1007 aaKnown RBP13.92□□□□□ -0.18
SNX6-207ENST00000556303 HYIQ5T013 277 aa13.92□□□□□ -0.18
SNX6-207ENST00000556303 COLEC11Q9BWP8 271 aa13.92□□□□□ -0.18
SNX6-207ENST00000556303 CCDC113Q9H0I3 377 aa13.92□□□□□ -0.18
SNX6-207ENST00000556303 NT5C3AQ9H0P0 336 aa13.92□□□□□ -0.18
SNX6-207ENST00000556303 ADAM7Q9H2U9 754 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms