RNA–Protein interactions for RNA: ENST00000556164.5

PRKCH-220, Transcript of protein kinase C eta, humanhuman

TSL 3

Gene PRKCH, Length 429 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-220ENST00000556164 AUTS2Q8WXX7 1259 aa6.58□□□□□ -1.36
PRKCH-220ENST00000556164 TMEM169Q96HH4 297 aa6.58□□□□□ -1.36
PRKCH-220ENST00000556164 ZNF577Q9BSK1 485 aa6.58□□□□□ -1.36
PRKCH-220ENST00000556164 MRPL9Q9BYD2 267 aaKnown RBP6.58□□□□□ -1.36
PRKCH-220ENST00000556164 CYLDQ9NQC7 956 aa6.58□□□□□ -1.36
PRKCH-220ENST00000556164 DZANK1Q9NVP4 752 aa6.58□□□□□ -1.36
PRKCH-220ENST00000556164 RBM28Q9NW13 759 aaKnown RBP6.58□□□□□ -1.36
PRKCH-220ENST00000556164 DMGDHQ9UI17 866 aaKnown RBP6.58□□□□□ -1.36
PRKCH-220ENST00000556164 CEP131Q9UPN4 1083 aa6.58□□□□□ -1.36
PRKCH-220ENST00000556164 PRKAB1Q9Y478 270 aa6.58□□□□□ -1.36
PRKCH-220ENST00000556164 TDRD15B5MCY1 1934 aaKnown RBP6.57□□□□□ -1.36
PRKCH-220ENST00000556164 MTCL1Q9Y4B5 1905 aaKnown RBP6.57□□□□□ -1.36
PRKCH-220ENST00000556164 POTEMA6NI47 508 aa6.57□□□□□ -1.36
PRKCH-220ENST00000556164 hCG_1984214I3L0E3 225 aa6.57□□□□□ -1.36
PRKCH-220ENST00000556164 SLC27A2O14975 620 aa6.57□□□□□ -1.36
PRKCH-220ENST00000556164 MAGEB2O15479 319 aa6.57□□□□□ -1.36
PRKCH-220ENST00000556164 DHX15O43143 795 aaKnown RBP6.57□□□□□ -1.36
PRKCH-220ENST00000556164 ZC3H11AO75152 810 aaKnown RBP eCLIP6.57□□□□□ -1.36
PRKCH-220ENST00000556164 EOMESO95936 686 aa6.57□□□□□ -1.36
PRKCH-220ENST00000556164 PSAPP07602 524 aa6.57□□□□□ -1.36
PRKCH-220ENST00000556164 EPCAMP16422 314 aa6.57□□□□□ -1.36
PRKCH-220ENST00000556164 FGFR4P22455 802 aa6.57□□□□□ -1.36
PRKCH-220ENST00000556164 EIF4BP23588 611 aaKnown RBP6.57□□□□□ -1.36
PRKCH-220ENST00000556164 TMOD1P28289 359 aa6.57□□□□□ -1.36
PRKCH-220ENST00000556164 ID4P47928 161 aa6.57□□□□□ -1.36
PRKCH-220ENST00000556164 GPC3P51654 580 aa6.57□□□□□ -1.36
PRKCH-220ENST00000556164 CLCN5P51795 746 aa6.57□□□□□ -1.36
PRKCH-220ENST00000556164 SETQ01105 290 aaPredicted RBP6.57□□□□□ -1.36
PRKCH-220ENST00000556164 RTN1Q16799 776 aa6.57□□□□□ -1.36
PRKCH-220ENST00000556164 PLEKHG6Q3KR16 790 aa6.57□□□□□ -1.36
PRKCH-220ENST00000556164 LONRF3Q496Y0 759 aa6.57□□□□□ -1.36
PRKCH-220ENST00000556164 CWF19L1Q69YN2 538 aaKnown RBP6.57□□□□□ -1.36
PRKCH-220ENST00000556164 APOA5Q6Q788 366 aa6.57□□□□□ -1.36
PRKCH-220ENST00000556164 TMC5Q6UXY8 1006 aa6.57□□□□□ -1.36
PRKCH-220ENST00000556164 ERMP1Q7Z2K6 904 aa6.57□□□□□ -1.36
PRKCH-220ENST00000556164 CABP7Q86V35 215 aa6.57□□□□□ -1.36
PRKCH-220ENST00000556164 SGMS1Q86VZ5 419 aa6.57□□□□□ -1.36
PRKCH-220ENST00000556164 TEX2Q8IWB9 1127 aa6.57□□□□□ -1.36
PRKCH-220ENST00000556164 SMAP1Q8IYB5 467 aaPredicted RBP6.57□□□□□ -1.36
PRKCH-220ENST00000556164 ZDHHC14Q8IZN3 488 aa6.57□□□□□ -1.36
PRKCH-220ENST00000556164 ZNF713Q8N859 430 aaPredicted RBP6.57□□□□□ -1.36
PRKCH-220ENST00000556164 CRELD1Q96HD1 420 aa6.57□□□□□ -1.36
PRKCH-220ENST00000556164 FAM167AQ96KS9 214 aa6.57□□□□□ -1.36
PRKCH-220ENST00000556164 FRMD6Q96NE9 622 aa6.57□□□□□ -1.36
PRKCH-220ENST00000556164 DCBLD2Q96PD2 775 aa6.57□□□□□ -1.36
PRKCH-220ENST00000556164 FAM129BQ96TA1 746 aa6.57□□□□□ -1.36
PRKCH-220ENST00000556164 ZBP1Q9H171 429 aa6.57□□□□□ -1.36
PRKCH-220ENST00000556164 GLT8D2Q9H1C3 349 aa6.57□□□□□ -1.36
PRKCH-220ENST00000556164 ADAMTS10Q9H324 1103 aa6.57□□□□□ -1.36
PRKCH-220ENST00000556164 CYP26B1Q9NR63 512 aa6.57□□□□□ -1.36
PRKCH-220ENST00000556164 BARHL2Q9NY43 387 aa6.57□□□□□ -1.36
PRKCH-220ENST00000556164 DACT1Q9NYF0 836 aa6.57□□□□□ -1.36
PRKCH-220ENST00000556164 GABBR1Q9UBS5 961 aa6.57□□□□□ -1.36
PRKCH-220ENST00000556164 FBXL21Q9UKT6 434 aa6.57□□□□□ -1.36
PRKCH-220ENST00000556164 SAMM50Q9Y512 469 aa6.57□□□□□ -1.36
PRKCH-220ENST00000556164 V9GY48 417 aaPredicted RBP6.57□□□□□ -1.36
PRKCH-220ENST00000556164 VPS13AQ96RL7 3174 aa6.57□□□□□ -1.36
PRKCH-220ENST00000556164 DOCK8Q8NF50 2099 aa6.57□□□□□ -1.36
PRKCH-220ENST00000556164 FANCMQ8IYD8 2048 aa6.57□□□□□ -1.36
PRKCH-220ENST00000556164 MIA3Q5JRA6 1907 aa6.56□□□□□ -1.36
PRKCH-220ENST00000556164 IGLV3-22A0A075B6J6 115 aa6.56□□□□□ -1.36
PRKCH-220ENST00000556164 A0A0U1RQF3 1178 aa6.56□□□□□ -1.36
PRKCH-220ENST00000556164 SFI1A8K8P3 1242 aa6.56□□□□□ -1.36
PRKCH-220ENST00000556164 HMGB1P1B2RPK0 211 aaPredicted RBP6.56□□□□□ -1.36
PRKCH-220ENST00000556164 ZBTB43O43298 467 aa6.56□□□□□ -1.36
PRKCH-220ENST00000556164 DNAJC6O75061 913 aa6.56□□□□□ -1.36
PRKCH-220ENST00000556164 CSDE1O75534 798 aaKnown RBP6.56□□□□□ -1.36
PRKCH-220ENST00000556164 DARSP14868 501 aaKnown RBP6.56□□□□□ -1.36
PRKCH-220ENST00000556164 AOC1P19801 751 aa6.56□□□□□ -1.36
PRKCH-220ENST00000556164 RNASELQ05823 741 aaKnown RBP6.56□□□□□ -1.36
PRKCH-220ENST00000556164 GIT2Q14161 759 aa6.56□□□□□ -1.36
PRKCH-220ENST00000556164 ANGPT1Q15389 498 aa6.56□□□□□ -1.36
PRKCH-220ENST00000556164 PRR16Q569H4 304 aa6.56□□□□□ -1.36
PRKCH-220ENST00000556164 CREB3L3Q68CJ9 461 aa6.56□□□□□ -1.36
PRKCH-220ENST00000556164 ALG1LQ6GMV1 187 aa6.56□□□□□ -1.36
PRKCH-220ENST00000556164 CCDC149Q6ZUS6 474 aa6.56□□□□□ -1.36
PRKCH-220ENST00000556164 ZNF598Q86UK7 904 aaKnown RBP6.56□□□□□ -1.36
PRKCH-220ENST00000556164 TMEM173Q86WV6 379 aaPredicted RBP6.56□□□□□ -1.36
PRKCH-220ENST00000556164 LINC01465Q8N7H1 131 aa6.56□□□□□ -1.36
PRKCH-220ENST00000556164 ARMC2Q8NEN0 867 aa6.56□□□□□ -1.36
PRKCH-220ENST00000556164 TPCN2Q8NHX9 752 aa6.56□□□□□ -1.36
PRKCH-220ENST00000556164 FEZF2Q8TBJ5 459 aa6.56□□□□□ -1.36
PRKCH-220ENST00000556164 LPPQ93052 612 aa6.56□□□□□ -1.36
PRKCH-220ENST00000556164 ACSF2Q96CM8 615 aaPredicted RBP6.56□□□□□ -1.36
PRKCH-220ENST00000556164 TCEANC2Q96MN5 208 aa6.56□□□□□ -1.36
PRKCH-220ENST00000556164 MKNK1Q9BUB5 465 aa6.56□□□□□ -1.36
PRKCH-220ENST00000556164 LSG1Q9H089 658 aaKnown RBP6.56□□□□□ -1.36
PRKCH-220ENST00000556164 SFXN1Q9H9B4 322 aa6.56□□□□□ -1.36
PRKCH-220ENST00000556164 TBC1D22BQ9NU19 505 aa6.56□□□□□ -1.36
PRKCH-220ENST00000556164 PCDHB9Q9Y5E1 797 aa6.56□□□□□ -1.36
PRKCH-220ENST00000556164 PCDHA10Q9Y5I2 948 aa6.56□□□□□ -1.36
PRKCH-220ENST00000556164 DOCK6Q96HP0 2047 aa6.55□□□□□ -1.36
PRKCH-220ENST00000556164 DCHS1Q96JQ0 3298 aa6.55□□□□□ -1.36
PRKCH-220ENST00000556164 MYH15Q9Y2K3 1946 aa6.55□□□□□ -1.36
PRKCH-220ENST00000556164 GOLGA8AA7E2F4 631 aa6.55□□□□□ -1.36
PRKCH-220ENST00000556164 GOLGA8BA8MQT2 603 aa6.55□□□□□ -1.36
PRKCH-220ENST00000556164 WDR64B1ANS9 1081 aa6.55□□□□□ -1.36
PRKCH-220ENST00000556164 CHMP2AO43633 222 aa6.55□□□□□ -1.36
PRKCH-220ENST00000556164 PI15O43692 258 aa6.55□□□□□ -1.36
PRKCH-220ENST00000556164 SSBP05455 408 aaKnown RBP eCLIP6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms