RNA–Protein interactions for RNA: ENST00000555962.5

CHD8-210, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 5

Gene CHD8, Length 1,232 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-210ENST00000555962 KBTBD4Q9NVX7 518 aa9.91□□□□□ -0.82
CHD8-210ENST00000555962 KCNH3Q9ULD8 1083 aa9.91□□□□□ -0.82
CHD8-210ENST00000555962 USP20Q9Y2K6 914 aa9.91□□□□□ -0.82
CHD8-210ENST00000555962 SLC4A7Q9Y6M7 1214 aa9.91□□□□□ -0.82
CHD8-210ENST00000555962 PDCD11Q14690 1871 aaKnown RBP9.91□□□□□ -0.82
CHD8-210ENST00000555962 CHD7Q9P2D1 2997 aa9.9□□□□□ -0.82
CHD8-210ENST00000555962 RALGAPA2Q2PPJ7 1873 aa9.9□□□□□ -0.82
CHD8-210ENST00000555962 INO80B-WBP1J3KQ70 363 aa9.9□□□□□ -0.82
CHD8-210ENST00000555962 B4GALT5O43286 388 aa9.9□□□□□ -0.82
CHD8-210ENST00000555962 ACTN4O43707 911 aaKnown RBP9.9□□□□□ -0.82
CHD8-210ENST00000555962 TSPAN1O60635 241 aa9.9□□□□□ -0.82
CHD8-210ENST00000555962 EFCAB14O75071 495 aa9.9□□□□□ -0.82
CHD8-210ENST00000555962 GADD45BO75293 160 aaPredicted RBP9.9□□□□□ -0.82
CHD8-210ENST00000555962 KRT18P05783 430 aaKnown RBP9.9□□□□□ -0.82
CHD8-210ENST00000555962 PLS3P13797 630 aa9.9□□□□□ -0.82
CHD8-210ENST00000555962 ATP2A2P16615 1042 aaKnown RBP9.9□□□□□ -0.82
CHD8-210ENST00000555962 SFPQP23246 707 aaKnown RBP eCLIP9.9□□□□□ -0.82
CHD8-210ENST00000555962 HOXA11P31270 313 aaPredicted RBP9.9□□□□□ -0.82
CHD8-210ENST00000555962 PBX2P40425 430 aa9.9□□□□□ -0.82
CHD8-210ENST00000555962 KCNJ6P48051 423 aa9.9□□□□□ -0.82
CHD8-210ENST00000555962 NDUFA8P51970 172 aa9.9□□□□□ -0.82
CHD8-210ENST00000555962 ZNF131P52739 623 aa9.9□□□□□ -0.82
CHD8-210ENST00000555962 PPP2R5AQ15172 486 aa9.9□□□□□ -0.82
CHD8-210ENST00000555962 NR6A1Q15406 480 aa9.9□□□□□ -0.82
CHD8-210ENST00000555962 LRIT3Q3SXY7 679 aa9.9□□□□□ -0.82
CHD8-210ENST00000555962 LONRF3Q496Y0 759 aa9.9□□□□□ -0.82
CHD8-210ENST00000555962 ODR4Q5SWX8 454 aa9.9□□□□□ -0.82
CHD8-210ENST00000555962 TAS1R3Q7RTX0 852 aa9.9□□□□□ -0.82
CHD8-210ENST00000555962 MYOCDQ8IZQ8 938 aa9.9□□□□□ -0.82
CHD8-210ENST00000555962 IQUBQ8NA54 791 aa9.9□□□□□ -0.82
CHD8-210ENST00000555962 MRPS27Q92552 414 aaKnown RBP9.9□□□□□ -0.82
CHD8-210ENST00000555962 IFT74Q96LB3 600 aa9.9□□□□□ -0.82
CHD8-210ENST00000555962 DRC1Q96MC2 740 aa9.9□□□□□ -0.82
CHD8-210ENST00000555962 SLC9A7Q96T83 725 aa9.9□□□□□ -0.82
CHD8-210ENST00000555962 ADAM2Q99965 735 aa9.9□□□□□ -0.82
CHD8-210ENST00000555962 FTHL17Q9BXU8 183 aa9.9□□□□□ -0.82
CHD8-210ENST00000555962 INO80BQ9C086 356 aaPredicted RBP9.9□□□□□ -0.82
CHD8-210ENST00000555962 CCDC113Q9H0I3 377 aa9.9□□□□□ -0.82
CHD8-210ENST00000555962 FZD8Q9H461 694 aa9.9□□□□□ -0.82
CHD8-210ENST00000555962 RGS18Q9NS28 235 aa9.9□□□□□ -0.82
CHD8-210ENST00000555962 AGPAT5Q9NUQ2 364 aa9.9□□□□□ -0.82
CHD8-210ENST00000555962 SERTAD1Q9UHV2 236 aa9.9□□□□□ -0.82
CHD8-210ENST00000555962 ODF2LQ9ULJ1 636 aa9.9□□□□□ -0.82
CHD8-210ENST00000555962 TRANK1O15050 2925 aa9.9□□□□□ -0.82
CHD8-210ENST00000555962 ANK1P16157 1881 aa9.89□□□□□ -0.83
CHD8-210ENST00000555962 HSFX4A0A1B0GTS1 333 aaPredicted RBP9.89□□□□□ -0.83
CHD8-210ENST00000555962 HSFX3A0A1B0GWH4 333 aaPredicted RBP9.89□□□□□ -0.83
CHD8-210ENST00000555962 CCDC169A6NNP5 214 aa9.89□□□□□ -0.83
CHD8-210ENST00000555962 C9IYK1 514 aa9.89□□□□□ -0.83
CHD8-210ENST00000555962 SLC16A4O15374 487 aa9.89□□□□□ -0.83
CHD8-210ENST00000555962 FAM13AO94988 1023 aa9.89□□□□□ -0.83
CHD8-210ENST00000555962 UPP2O95045 317 aa9.89□□□□□ -0.83
CHD8-210ENST00000555962 AMHP03971 560 aa9.89□□□□□ -0.83
CHD8-210ENST00000555962 MYOGP15173 224 aa9.89□□□□□ -0.83
CHD8-210ENST00000555962 CASP1P29466 404 aa9.89□□□□□ -0.83
CHD8-210ENST00000555962 SOX11P35716 441 aa9.89□□□□□ -0.83
CHD8-210ENST00000555962 RABGGTBP53611 331 aa9.89□□□□□ -0.83
CHD8-210ENST00000555962 FAM117BQ6P1L5 589 aa9.89□□□□□ -0.83
CHD8-210ENST00000555962 RETREG3Q86VR2 466 aa9.89□□□□□ -0.83
CHD8-210ENST00000555962 CDR2LQ86X02 465 aaPredicted RBP9.89□□□□□ -0.83
CHD8-210ENST00000555962 HERC6Q8IVU3 1022 aa9.89□□□□□ -0.83
CHD8-210ENST00000555962 ZBTB8OSQ8IWT0 167 aa9.89□□□□□ -0.83
CHD8-210ENST00000555962 GRAMD1CQ8IYS0 662 aa9.89□□□□□ -0.83
CHD8-210ENST00000555962 CRIPAKQ8N1N5 446 aa9.89□□□□□ -0.83
CHD8-210ENST00000555962 DEPTORQ8TB45 409 aa9.89□□□□□ -0.83
CHD8-210ENST00000555962 PHOSPHO2Q8TCD6 241 aa9.89□□□□□ -0.83
CHD8-210ENST00000555962 TOP1MTQ969P6 601 aa9.89□□□□□ -0.83
CHD8-210ENST00000555962 LRCH3Q96II8 777 aa9.89□□□□□ -0.83
CHD8-210ENST00000555962 CPB2Q96IY4 423 aa9.89□□□□□ -0.83
CHD8-210ENST00000555962 FIZ1Q96SL8 496 aa9.89□□□□□ -0.83
CHD8-210ENST00000555962 NTPCRQ9BSD7 190 aaKnown RBP9.89□□□□□ -0.83
CHD8-210ENST00000555962 C2orf40Q9H1Z8 148 aa9.89□□□□□ -0.83
CHD8-210ENST00000555962 TNMDQ9H2S6 317 aa9.89□□□□□ -0.83
CHD8-210ENST00000555962 CUEDC2Q9H467 287 aa9.89□□□□□ -0.83
CHD8-210ENST00000555962 C17orf75Q9HAS0 396 aa9.89□□□□□ -0.83
CHD8-210ENST00000555962 KMT5AQ9NQR1 393 aa9.89□□□□□ -0.83
CHD8-210ENST00000555962 ARHGAP28Q9P2N2 729 aa9.89□□□□□ -0.83
CHD8-210ENST00000555962 PIN4Q9Y237 131 aaKnown RBP9.89□□□□□ -0.83
CHD8-210ENST00000555962 YBX2Q9Y2T7 364 aaKnown RBP9.89□□□□□ -0.83
CHD8-210ENST00000555962 ATG2AQ2TAZ0 1938 aa9.89□□□□□ -0.83
CHD8-210ENST00000555962 FRMD3A2A2Y4 597 aa9.88□□□□□ -0.83
CHD8-210ENST00000555962 DENND3A2RUS2 1198 aa9.88□□□□□ -0.83
CHD8-210ENST00000555962 ERLIN2O94905 339 aa9.88□□□□□ -0.83
CHD8-210ENST00000555962 GJB5O95377 273 aa9.88□□□□□ -0.83
CHD8-210ENST00000555962 PRKCBP05771 671 aa9.88□□□□□ -0.83
CHD8-210ENST00000555962 SLFN14P0C7P3 912 aa9.88□□□□□ -0.83
CHD8-210ENST00000555962 ZSCAN20P17040 1043 aaPredicted RBP9.88□□□□□ -0.83
CHD8-210ENST00000555962 ATF7P17544 494 aaPredicted RBP9.88□□□□□ -0.83
CHD8-210ENST00000555962 ARF4P18085 180 aaPredicted RBP9.88□□□□□ -0.83
CHD8-210ENST00000555962 LIG1P18858 919 aa9.88□□□□□ -0.83
CHD8-210ENST00000555962 IBSPP21815 317 aaPredicted RBP9.88□□□□□ -0.83
CHD8-210ENST00000555962 SYKP43405 635 aa9.88□□□□□ -0.83
CHD8-210ENST00000555962 AFMP43652 599 aa9.88□□□□□ -0.83
CHD8-210ENST00000555962 SARSP49591 514 aaKnown RBP9.88□□□□□ -0.83
CHD8-210ENST00000555962 NCKAP1LP55160 1127 aa9.88□□□□□ -0.83
CHD8-210ENST00000555962 FAM189BP81408 668 aa9.88□□□□□ -0.83
CHD8-210ENST00000555962 DMP1Q13316 513 aaPredicted RBP9.88□□□□□ -0.83
CHD8-210ENST00000555962 FAM187BQ17R55 369 aa9.88□□□□□ -0.83
CHD8-210ENST00000555962 UBXN11Q5T124 520 aa9.88□□□□□ -0.83
CHD8-210ENST00000555962 NT5DC1Q5TFE4 455 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms