RNA–Protein interactions for RNA: ENST00000555746.5

SRP54-209, Transcript of signal recognition particle 54, humanhuman

TSL 4

Gene SRP54, Length 558 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-209ENST00000555746 PF4V1P10720 104 aa4.42□□□□□ -1.7
SRP54-209ENST00000555746 AKAP5P24588 427 aa4.42□□□□□ -1.7
SRP54-209ENST00000555746 MCAMP43121 646 aa4.42□□□□□ -1.7
SRP54-209ENST00000555746 KCNC1P48547 511 aa4.42□□□□□ -1.7
SRP54-209ENST00000555746 ADAMTS12P58397 1594 aa4.42□□□□□ -1.7
SRP54-209ENST00000555746 C1QTNF8P60827 252 aa4.42□□□□□ -1.7
SRP54-209ENST00000555746 HGFACQ04756 655 aa4.42□□□□□ -1.7
SRP54-209ENST00000555746 ADAM15Q13444 863 aa4.42□□□□□ -1.7
SRP54-209ENST00000555746 LRRC41Q15345 812 aa4.42□□□□□ -1.7
SRP54-209ENST00000555746 C19orf54Q5BKX5 351 aa4.42□□□□□ -1.7
SRP54-209ENST00000555746 FAM102BQ5T8I3 360 aa4.42□□□□□ -1.7
SRP54-209ENST00000555746 CXorf57Q6NSI4 855 aaKnown RBP4.42□□□□□ -1.7
SRP54-209ENST00000555746 USP30Q70CQ3 517 aa4.42□□□□□ -1.7
SRP54-209ENST00000555746 GPR155Q7Z3F1 870 aa4.42□□□□□ -1.7
SRP54-209ENST00000555746 FAM124AQ86V42 546 aa4.42□□□□□ -1.7
SRP54-209ENST00000555746 FMNL3Q8IVF7 1028 aa4.42□□□□□ -1.7
SRP54-209ENST00000555746 SP8Q8IXZ3 490 aa4.42□□□□□ -1.7
SRP54-209ENST00000555746 TCEAL8Q8IYN2 117 aa4.42□□□□□ -1.7
SRP54-209ENST00000555746 CHPFQ8IZ52 775 aa4.42□□□□□ -1.7
SRP54-209ENST00000555746 THEMISQ8N1K5 641 aaPredicted RBP4.42□□□□□ -1.7
SRP54-209ENST00000555746 PLA2G15Q8NCC3 412 aa4.42□□□□□ -1.7
SRP54-209ENST00000555746 ZSCAN18Q8TBC5 510 aaPredicted RBP4.42□□□□□ -1.7
SRP54-209ENST00000555746 SNX33Q8WV41 574 aa4.42□□□□□ -1.7
SRP54-209ENST00000555746 JPH3Q8WXH2 748 aaPredicted RBP4.42□□□□□ -1.7
SRP54-209ENST00000555746 SLC7A6OSQ96CW6 309 aaPredicted RBP4.42□□□□□ -1.7
SRP54-209ENST00000555746 HSPBAP1Q96EW2 488 aa4.42□□□□□ -1.7
SRP54-209ENST00000555746 KIAA1683Q9H0B3 1180 aa4.42□□□□□ -1.7
SRP54-209ENST00000555746 CSRNP2Q9H175 543 aa4.42□□□□□ -1.7
SRP54-209ENST00000555746 C14orf93Q9H972 538 aaKnown RBP4.42□□□□□ -1.7
SRP54-209ENST00000555746 JADE2Q9NQC1 790 aa4.42□□□□□ -1.7
SRP54-209ENST00000555746 PTPN22Q9Y2R2 807 aa4.42□□□□□ -1.7
SRP54-209ENST00000555746 ZDHHC9Q9Y397 364 aa4.42□□□□□ -1.7
SRP54-209ENST00000555746 ABCA5Q8WWZ7 1642 aa4.42□□□□□ -1.7
SRP54-209ENST00000555746 UHRF1BP1LA0JNW5 1464 aa4.42□□□□□ -1.7
SRP54-209ENST00000555746 FHAD1B1AJZ9 1412 aa4.41□□□□□ -1.7
SRP54-209ENST00000555746 PTPRGP23470 1445 aa4.41□□□□□ -1.7
SRP54-209ENST00000555746 ARHGAP6O43182 974 aa4.41□□□□□ -1.7
SRP54-209ENST00000555746 TRIM13O60858 407 aa4.41□□□□□ -1.7
SRP54-209ENST00000555746 PHF2O75151 1096 aa4.41□□□□□ -1.7
SRP54-209ENST00000555746 U2AF1L5P0DN76 240 aaPredicted RBP4.41□□□□□ -1.7
SRP54-209ENST00000555746 CTSSP25774 331 aa4.41□□□□□ -1.7
SRP54-209ENST00000555746 CYP2C19P33261 490 aa4.41□□□□□ -1.7
SRP54-209ENST00000555746 ADCY7P51828 1080 aa4.41□□□□□ -1.7
SRP54-209ENST00000555746 SLC16A1P53985 500 aa4.41□□□□□ -1.7
SRP54-209ENST00000555746 RRADP55042 308 aa4.41□□□□□ -1.7
SRP54-209ENST00000555746 WNT3AP56704 352 aa4.41□□□□□ -1.7
SRP54-209ENST00000555746 GJA9P57773 515 aa4.41□□□□□ -1.7
SRP54-209ENST00000555746 ADAM8P78325 824 aa4.41□□□□□ -1.7
SRP54-209ENST00000555746 CCT2P78371 535 aaKnown RBP4.41□□□□□ -1.7
SRP54-209ENST00000555746 U2AF1Q01081 240 aaKnown RBP eCLIP4.41□□□□□ -1.7
SRP54-209ENST00000555746 PPP3CAQ08209 521 aa4.41□□□□□ -1.7
SRP54-209ENST00000555746 TBR1Q16650 682 aa4.41□□□□□ -1.7
SRP54-209ENST00000555746 GAGE13Q4V321 117 aa4.41□□□□□ -1.7
SRP54-209ENST00000555746 RRP12Q5JTH9 1297 aaKnown RBP4.41□□□□□ -1.7
SRP54-209ENST00000555746 SIAH1Q8IUQ4 282 aa4.41□□□□□ -1.7
SRP54-209ENST00000555746 KBTBD2Q8IY47 623 aa4.41□□□□□ -1.7
SRP54-209ENST00000555746 GPR156Q8NFN8 814 aa4.41□□□□□ -1.7
SRP54-209ENST00000555746 COA7Q96BR5 231 aa4.41□□□□□ -1.7
SRP54-209ENST00000555746 AIFM3Q96NN9 605 aa4.41□□□□□ -1.7
SRP54-209ENST00000555746 UIMC1Q96RL1 719 aa4.41□□□□□ -1.7
SRP54-209ENST00000555746 KRTAP9-9Q9BYP9 154 aa4.41□□□□□ -1.7
SRP54-209ENST00000555746 KRTAP9-4Q9BYQ2 154 aa4.41□□□□□ -1.7
SRP54-209ENST00000555746 SLC6A15Q9H2J7 730 aa4.41□□□□□ -1.7
SRP54-209ENST00000555746 MSL2Q9HCI7 577 aa4.41□□□□□ -1.7
SRP54-209ENST00000555746 RBM12Q9NTZ6 932 aaKnown RBP4.41□□□□□ -1.7
SRP54-209ENST00000555746 RPTORQ8N122 1335 aa4.41□□□□□ -1.7
SRP54-209ENST00000555746 CEP350Q5VT06 3117 aa4.41□□□□□ -1.7
SRP54-209ENST00000555746 KRTAP4-8A0A0G2JLE6 195 aa4.4□□□□□ -1.71
SRP54-209ENST00000555746 IL33O95760 270 aa4.4□□□□□ -1.71
SRP54-209ENST00000555746 KIR2DL3P43628 341 aa4.4□□□□□ -1.71
SRP54-209ENST00000555746 MGAT2Q10469 447 aa4.4□□□□□ -1.71
SRP54-209ENST00000555746 TCIRG1Q13488 830 aa4.4□□□□□ -1.71
SRP54-209ENST00000555746 GTF2H3Q13889 308 aa4.4□□□□□ -1.71
SRP54-209ENST00000555746 KRTAP19-4Q3LI73 84 aa4.4□□□□□ -1.71
SRP54-209ENST00000555746 NT5DC1Q5TFE4 455 aa4.4□□□□□ -1.71
SRP54-209ENST00000555746 BORAQ6PGQ7 559 aa4.4□□□□□ -1.71
SRP54-209ENST00000555746 FAM180AQ6UWF9 173 aa4.4□□□□□ -1.71
SRP54-209ENST00000555746 ABHD15Q6UXT9 468 aa4.4□□□□□ -1.71
SRP54-209ENST00000555746 PLEKHH3Q7Z736 793 aa4.4□□□□□ -1.71
SRP54-209ENST00000555746 LGI4Q8N135 537 aa4.4□□□□□ -1.71
SRP54-209ENST00000555746 MIER2Q8N344 545 aa4.4□□□□□ -1.71
SRP54-209ENST00000555746 PRR18Q8N4B5 295 aa4.4□□□□□ -1.71
SRP54-209ENST00000555746 MAGEB6Q8N7X4 407 aa4.4□□□□□ -1.71
SRP54-209ENST00000555746 MARCH10Q8NA82 808 aaPredicted RBP4.4□□□□□ -1.71
SRP54-209ENST00000555746 RIN2Q8WYP3 895 aaPredicted RBP4.4□□□□□ -1.71
SRP54-209ENST00000555746 CFHR4Q92496 578 aa4.4□□□□□ -1.71
SRP54-209ENST00000555746 HOXB13Q92826 284 aaPredicted RBP4.4□□□□□ -1.71
SRP54-209ENST00000555746 TSR2Q969E8 191 aaKnown RBP4.4□□□□□ -1.71
SRP54-209ENST00000555746 RELTQ969Z4 430 aa4.4□□□□□ -1.71
SRP54-209ENST00000555746 ADI1Q9BV57 179 aa4.4□□□□□ -1.71
SRP54-209ENST00000555746 SERPINB13Q9UIV8 391 aa4.4□□□□□ -1.71
SRP54-209ENST00000555746 ZBTB21Q9ULJ3 1066 aa4.4□□□□□ -1.71
SRP54-209ENST00000555746 IPPQ9Y573 584 aa4.4□□□□□ -1.71
SRP54-209ENST00000555746 CDK12Q9NYV4 1490 aaPredicted RBP4.4□□□□□ -1.71
SRP54-209ENST00000555746 CUX1P39880 1505 aa4.4□□□□□ -1.71
SRP54-209ENST00000555746 KDM5BQ9UGL1 1544 aa4.4□□□□□ -1.71
SRP54-209ENST00000555746 FANCAO15360 1455 aa4.39□□□□□ -1.71
SRP54-209ENST00000555746 FAM171A2A8MVW0 826 aa4.39□□□□□ -1.71
SRP54-209ENST00000555746 HTRA2O43464 458 aaPredicted RBP4.39□□□□□ -1.71
SRP54-209ENST00000555746 ALDH1A2O94788 518 aa4.39□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms