RNA–Protein interactions for RNA: ENST00000555550.1

SCFD1-216, Transcript of sec1 family domain containing 1, humanhuman

TSL 4

Gene SCFD1, Length 541 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-216ENST00000555550 XYLT1Q86Y38 959 aa5.51□□□□□ -1.53
SCFD1-216ENST00000555550 C7orf31Q8N865 590 aa5.51□□□□□ -1.53
SCFD1-216ENST00000555550 CAVIN3Q969G5 261 aa5.51□□□□□ -1.53
SCFD1-216ENST00000555550 ELF4Q99607 663 aaPredicted RBP5.51□□□□□ -1.53
SCFD1-216ENST00000555550 FEZ1Q99689 392 aa5.51□□□□□ -1.53
SCFD1-216ENST00000555550 NOL10Q9BSC4 688 aaKnown RBP5.51□□□□□ -1.53
SCFD1-216ENST00000555550 MYL10Q9BUA6 226 aa5.51□□□□□ -1.53
SCFD1-216ENST00000555550 TEX101Q9BY14 249 aa5.51□□□□□ -1.53
SCFD1-216ENST00000555550 OSBPL6Q9BZF3 934 aa5.51□□□□□ -1.53
SCFD1-216ENST00000555550 AKIP1Q9NQ31 210 aa5.51□□□□□ -1.53
SCFD1-216ENST00000555550 OXSMQ9NWU1 459 aa5.51□□□□□ -1.53
SCFD1-216ENST00000555550 SYBUQ9NX95 663 aa5.51□□□□□ -1.53
SCFD1-216ENST00000555550 ZNF891A8MT65 544 aaPredicted RBP5.5□□□□□ -1.53
SCFD1-216ENST00000555550 ALDH1A2O94788 518 aa5.5□□□□□ -1.53
SCFD1-216ENST00000555550 PRPF6O94906 941 aaKnown RBP5.5□□□□□ -1.53
SCFD1-216ENST00000555550 FSBPO95073 299 aa5.5□□□□□ -1.53
SCFD1-216ENST00000555550 ERBB2P04626 1255 aa5.5□□□□□ -1.53
SCFD1-216ENST00000555550 ADCY1Q08828 1119 aa5.5□□□□□ -1.53
SCFD1-216ENST00000555550 FOXI1Q12951 378 aa5.5□□□□□ -1.53
SCFD1-216ENST00000555550 EPHA7Q15375 998 aa5.5□□□□□ -1.53
SCFD1-216ENST00000555550 TIGD7Q6NT04 549 aaPredicted RBP5.5□□□□□ -1.53
SCFD1-216ENST00000555550 KANSL1Q7Z3B3 1105 aa5.5□□□□□ -1.53
SCFD1-216ENST00000555550 GDF7Q7Z4P5 450 aa5.5□□□□□ -1.53
SCFD1-216ENST00000555550 PASD1Q8IV76 773 aa5.5□□□□□ -1.53
SCFD1-216ENST00000555550 ARHGEF19Q8IW93 802 aa5.5□□□□□ -1.53
SCFD1-216ENST00000555550 PIK3C3Q8NEB9 887 aa5.5□□□□□ -1.53
SCFD1-216ENST00000555550 PITHD1Q9GZP4 211 aaPredicted RBP5.5□□□□□ -1.53
SCFD1-216ENST00000555550 XPO5Q9HAV4 1204 aaKnown RBP eCLIP5.5□□□□□ -1.53
SCFD1-216ENST00000555550 THG1LQ9NWX6 298 aaKnown RBP5.5□□□□□ -1.53
SCFD1-216ENST00000555550 H2AFY2Q9P0M6 372 aaPredicted RBP5.5□□□□□ -1.53
SCFD1-216ENST00000555550 HDAC5Q9UQL6 1122 aa5.5□□□□□ -1.53
SCFD1-216ENST00000555550 SPO11Q9Y5K1 396 aa5.5□□□□□ -1.53
SCFD1-216ENST00000555550 UNC119BA6NIH7 251 aa5.49□□□□□ -1.53
SCFD1-216ENST00000555550 INO80B-WBP1J3KQ70 363 aa5.49□□□□□ -1.53
SCFD1-216ENST00000555550 RNASET2O00584 256 aaKnown RBP5.49□□□□□ -1.53
SCFD1-216ENST00000555550 ZNF185O15231 689 aa5.49□□□□□ -1.53
SCFD1-216ENST00000555550 OPHN1O60890 802 aa5.49□□□□□ -1.53
SCFD1-216ENST00000555550 F2P00734 622 aa5.49□□□□□ -1.53
SCFD1-216ENST00000555550 CDK4P11802 303 aa5.49□□□□□ -1.53
SCFD1-216ENST00000555550 ATP2A2P16615 1042 aaKnown RBP5.49□□□□□ -1.53
SCFD1-216ENST00000555550 CD69Q07108 199 aa5.49□□□□□ -1.53
SCFD1-216ENST00000555550 MAN2A1Q16706 1144 aa5.49□□□□□ -1.53
SCFD1-216ENST00000555550 PAPD7Q5XG87 772 aaKnown RBP5.49□□□□□ -1.53
SCFD1-216ENST00000555550 SP5Q6BEB4 398 aaPredicted RBP5.49□□□□□ -1.53
SCFD1-216ENST00000555550 IQSEC1Q6DN90 963 aa5.49□□□□□ -1.53
SCFD1-216ENST00000555550 KIF18BQ86Y91 864 aa5.49□□□□□ -1.53
SCFD1-216ENST00000555550 PHYKPLQ8IUZ5 450 aa5.49□□□□□ -1.53
SCFD1-216ENST00000555550 ZZZ3Q8IYH5 903 aa5.49□□□□□ -1.53
SCFD1-216ENST00000555550 AHI1Q8N157 1196 aa5.49□□□□□ -1.53
SCFD1-216ENST00000555550 PPM1KQ8N3J5 372 aa5.49□□□□□ -1.53
SCFD1-216ENST00000555550 GLB1L3Q8NCI6 653 aaPredicted RBP5.49□□□□□ -1.53
SCFD1-216ENST00000555550 CHTF18Q8WVB6 975 aa5.49□□□□□ -1.53
SCFD1-216ENST00000555550 MFSD3Q96ES6 412 aa5.49□□□□□ -1.53
SCFD1-216ENST00000555550 INO80BQ9C086 356 aaPredicted RBP5.49□□□□□ -1.53
SCFD1-216ENST00000555550 POFUT1Q9H488 388 aa5.49□□□□□ -1.53
SCFD1-216ENST00000555550 TESQ9UGI8 421 aaKnown RBP5.49□□□□□ -1.53
SCFD1-216ENST00000555550 PLAAQ9Y263 795 aa5.49□□□□□ -1.53
SCFD1-216ENST00000555550 SETD1BQ9UPS6 1966 aaKnown RBP5.49□□□□□ -1.53
SCFD1-216ENST00000555550 MAFGO15525 162 aa5.48□□□□□ -1.53
SCFD1-216ENST00000555550 SCNN1BP51168 640 aa5.48□□□□□ -1.53
SCFD1-216ENST00000555550 KPNA1P52294 538 aaPredicted RBP5.48□□□□□ -1.53
SCFD1-216ENST00000555550 SEC24CP53992 1094 aa5.48□□□□□ -1.53
SCFD1-216ENST00000555550 RNASE9P60153 205 aaKnown RBP5.48□□□□□ -1.53
SCFD1-216ENST00000555550 MRPL49Q13405 166 aaKnown RBP5.48□□□□□ -1.53
SCFD1-216ENST00000555550 PCBP1Q15365 356 aaKnown RBP eCLIP5.48□□□□□ -1.53
SCFD1-216ENST00000555550 PRR16Q569H4 304 aa5.48□□□□□ -1.53
SCFD1-216ENST00000555550 TAF7LQ5H9L4 462 aa5.48□□□□□ -1.53
SCFD1-216ENST00000555550 METTL24Q5JXM2 366 aa5.48□□□□□ -1.53
SCFD1-216ENST00000555550 ESRP1Q6NXG1 681 aaKnown RBP5.48□□□□□ -1.53
SCFD1-216ENST00000555550 NOP9Q86U38 636 aaKnown RBP5.48□□□□□ -1.53
SCFD1-216ENST00000555550 RTF1Q92541 710 aaKnown RBP5.48□□□□□ -1.53
SCFD1-216ENST00000555550 GPR101Q96P66 508 aaPredicted RBP5.48□□□□□ -1.53
SCFD1-216ENST00000555550 PDCD2LQ9BRP1 358 aa5.48□□□□□ -1.53
SCFD1-216ENST00000555550 TARS2Q9BW92 718 aaKnown RBP5.48□□□□□ -1.53
SCFD1-216ENST00000555550 SPON1Q9HCB6 807 aa5.48□□□□□ -1.53
SCFD1-216ENST00000555550 DKK2Q9UBU2 259 aa5.48□□□□□ -1.53
SCFD1-216ENST00000555550 INSL6Q9Y581 213 aa5.48□□□□□ -1.53
SCFD1-216ENST00000555550 KRTAP29-1A8MX34 341 aaPredicted RBP5.47□□□□□ -1.53
SCFD1-216ENST00000555550 PCDH8O95206 1070 aa5.47□□□□□ -1.53
SCFD1-216ENST00000555550 TYRP1P17643 537 aa5.47□□□□□ -1.53
SCFD1-216ENST00000555550 POU3F2P20265 443 aaPredicted RBP5.47□□□□□ -1.53
SCFD1-216ENST00000555550 CD40P25942 277 aa5.47□□□□□ -1.53
SCFD1-216ENST00000555550 CXCR5P32302 372 aa5.47□□□□□ -1.53
SCFD1-216ENST00000555550 AVPR1BP47901 424 aa5.47□□□□□ -1.53
SCFD1-216ENST00000555550 KRTAP10-9P60411 292 aa5.47□□□□□ -1.53
SCFD1-216ENST00000555550 IL2P60568 153 aa5.47□□□□□ -1.53
SCFD1-216ENST00000555550 DSG1Q02413 1049 aa5.47□□□□□ -1.53
SCFD1-216ENST00000555550 DALRD3Q5D0E6 543 aaKnown RBP5.47□□□□□ -1.53
SCFD1-216ENST00000555550 EPHA10Q5JZY3 1008 aa5.47□□□□□ -1.53
SCFD1-216ENST00000555550 CREB3L3Q68CJ9 461 aa5.47□□□□□ -1.53
SCFD1-216ENST00000555550 SYT12Q8IV01 421 aa5.47□□□□□ -1.53
SCFD1-216ENST00000555550 SIMC1Q8NDZ2 872 aa5.47□□□□□ -1.53
SCFD1-216ENST00000555550 OR2W6PQ8NHA6 318 aa5.47□□□□□ -1.53
SCFD1-216ENST00000555550 IL17RAQ96F46 866 aa5.47□□□□□ -1.53
SCFD1-216ENST00000555550 HIST1H2AHQ96KK5 128 aa5.47□□□□□ -1.53
SCFD1-216ENST00000555550 DCLRE1CQ96SD1 692 aaKnown RBP5.47□□□□□ -1.53
SCFD1-216ENST00000555550 HIST1H2AJQ99878 128 aa5.47□□□□□ -1.53
SCFD1-216ENST00000555550 ORAI3Q9BRQ5 295 aa5.47□□□□□ -1.53
SCFD1-216ENST00000555550 MTFR1LQ9H019 292 aa5.47□□□□□ -1.53
SCFD1-216ENST00000555550 NRP1O14786 923 aa5.46□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms