RNA–Protein interactions for RNA: ENST00000555386.5

PSEN1-213, Transcript of presenilin 1, humanhuman

TSL 1 (best)

Gene PSEN1, Length 1,484 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-213ENST00000555386 PPP2R5AQ15172 486 aa10.83□□□□□ -0.68
PSEN1-213ENST00000555386 ODR4Q5SWX8 454 aa10.83□□□□□ -0.68
PSEN1-213ENST00000555386 TWF2Q6IBS0 349 aaKnown RBP10.83□□□□□ -0.68
PSEN1-213ENST00000555386 SRGAP1Q7Z6B7 1085 aa10.83□□□□□ -0.68
PSEN1-213ENST00000555386 CDR2LQ86X02 465 aaPredicted RBP10.83□□□□□ -0.68
PSEN1-213ENST00000555386 KCTD17Q8N5Z5 321 aa10.83□□□□□ -0.68
PSEN1-213ENST00000555386 ERCC4Q92889 916 aaPredicted RBP10.83□□□□□ -0.68
PSEN1-213ENST00000555386 PYM1Q9BRP8 204 aaKnown RBP10.83□□□□□ -0.68
PSEN1-213ENST00000555386 ZBED2Q9BTP6 218 aa10.83□□□□□ -0.68
PSEN1-213ENST00000555386 TTC3P53804 2025 aa10.83□□□□□ -0.68
PSEN1-213ENST00000555386 ADGRA3Q8IWK6 1321 aa10.83□□□□□ -0.68
PSEN1-213ENST00000555386 ABHD14A-ACY1A0A1B0GW23 586 aa10.82□□□□□ -0.68
PSEN1-213ENST00000555386 BIN1O00499 593 aa10.82□□□□□ -0.68
PSEN1-213ENST00000555386 ENPP3O14638 875 aa10.82□□□□□ -0.68
PSEN1-213ENST00000555386 AMHP03971 560 aa10.82□□□□□ -0.68
PSEN1-213ENST00000555386 PRKCBP05771 671 aa10.82□□□□□ -0.68
PSEN1-213ENST00000555386 PLS3P13797 630 aa10.82□□□□□ -0.68
PSEN1-213ENST00000555386 ATP2A2P16615 1042 aaKnown RBP10.82□□□□□ -0.68
PSEN1-213ENST00000555386 MBTD1Q05BQ5 628 aa10.82□□□□□ -0.68
PSEN1-213ENST00000555386 PNOCQ13519 176 aa10.82□□□□□ -0.68
PSEN1-213ENST00000555386 HSP90AA2PQ14568 343 aaPredicted RBP10.82□□□□□ -0.68
PSEN1-213ENST00000555386 POSTNQ15063 836 aa10.82□□□□□ -0.68
PSEN1-213ENST00000555386 RTN4RL1Q86UN2 441 aaPredicted RBP10.82□□□□□ -0.68
PSEN1-213ENST00000555386 SFR1Q86XK3 245 aa10.82□□□□□ -0.68
PSEN1-213ENST00000555386 ZNF710Q8N1W2 664 aa10.82□□□□□ -0.68
PSEN1-213ENST00000555386 MLKLQ8NB16 471 aa10.82□□□□□ -0.68
PSEN1-213ENST00000555386 LINC01599Q8WXQ3 324 aa10.82□□□□□ -0.68
PSEN1-213ENST00000555386 APBB2Q92870 758 aa10.82□□□□□ -0.68
PSEN1-213ENST00000555386 HPS3Q969F9 1004 aa10.82□□□□□ -0.68
PSEN1-213ENST00000555386 TIPINQ9BVW5 301 aa10.82□□□□□ -0.68
PSEN1-213ENST00000555386 PRO3102Q9H379 93 aa10.82□□□□□ -0.68
PSEN1-213ENST00000555386 PARVGQ9HBI0 331 aa10.82□□□□□ -0.68
PSEN1-213ENST00000555386 KCND2Q9NZV8 630 aa10.82□□□□□ -0.68
PSEN1-213ENST00000555386 PAXBP1Q9Y5B6 917 aa10.82□□□□□ -0.68
PSEN1-213ENST00000555386 SQORQ9Y6N5 450 aa10.82□□□□□ -0.68
PSEN1-213ENST00000555386 CDH23Q9H251 3354 aa10.82□□□□□ -0.68
PSEN1-213ENST00000555386 LOC101059915A0A1B0GWI6 518 aaPredicted RBP10.81□□□□□ -0.68
PSEN1-213ENST00000555386 TTLL13PA6NNM8 815 aa10.81□□□□□ -0.68
PSEN1-213ENST00000555386 K7ENM7 598 aa10.81□□□□□ -0.68
PSEN1-213ENST00000555386 K7ERI5 159 aa10.81□□□□□ -0.68
PSEN1-213ENST00000555386 KIF2AO00139 706 aaPredicted RBP10.81□□□□□ -0.68
PSEN1-213ENST00000555386 TULP1O00294 542 aaPredicted RBP10.81□□□□□ -0.68
PSEN1-213ENST00000555386 ACTN4O43707 911 aaKnown RBP10.81□□□□□ -0.68
PSEN1-213ENST00000555386 BAIAP3O94812 1187 aa10.81□□□□□ -0.68
PSEN1-213ENST00000555386 TUBB4AP04350 444 aa10.81□□□□□ -0.68
PSEN1-213ENST00000555386 SLFN14P0C7P3 912 aa10.81□□□□□ -0.68
PSEN1-213ENST00000555386 SKILP12757 684 aa10.81□□□□□ -0.68
PSEN1-213ENST00000555386 MYOGP15173 224 aa10.81□□□□□ -0.68
PSEN1-213ENST00000555386 NMT1P30419 496 aaKnown RBP10.81□□□□□ -0.68
PSEN1-213ENST00000555386 SARSP49591 514 aaKnown RBP10.81□□□□□ -0.68
PSEN1-213ENST00000555386 SMTNP53814 917 aa10.81□□□□□ -0.68
PSEN1-213ENST00000555386 AMPD3Q01432 767 aa10.81□□□□□ -0.68
PSEN1-213ENST00000555386 NCBP1Q09161 790 aaKnown RBP10.81□□□□□ -0.68
PSEN1-213ENST00000555386 CUL4BQ13620 913 aa10.81□□□□□ -0.68
PSEN1-213ENST00000555386 MAPK6Q16659 721 aa10.81□□□□□ -0.68
PSEN1-213ENST00000555386 HERC4Q5GLZ8 1057 aaPredicted RBP10.81□□□□□ -0.68
PSEN1-213ENST00000555386 FAM178BQ8IXR5 827 aa10.81□□□□□ -0.68
PSEN1-213ENST00000555386 SPATA20Q8TB22 786 aa10.81□□□□□ -0.68
PSEN1-213ENST00000555386 DNAJC19Q96DA6 116 aa10.81□□□□□ -0.68
PSEN1-213ENST00000555386 PAGE5Q96GU1 130 aa10.81□□□□□ -0.68
PSEN1-213ENST00000555386 APOL6Q9BWW8 343 aa10.81□□□□□ -0.68
PSEN1-213ENST00000555386 FTHL17Q9BXU8 183 aa10.81□□□□□ -0.68
PSEN1-213ENST00000555386 XPO4Q9C0E2 1151 aaKnown RBP10.81□□□□□ -0.68
PSEN1-213ENST00000555386 C2orf40Q9H1Z8 148 aa10.81□□□□□ -0.68
PSEN1-213ENST00000555386 PDCL3Q9H2J4 239 aa10.81□□□□□ -0.68
PSEN1-213ENST00000555386 CUEDC2Q9H467 287 aa10.81□□□□□ -0.68
PSEN1-213ENST00000555386 MRPL44Q9H9J2 332 aaKnown RBP10.81□□□□□ -0.68
PSEN1-213ENST00000555386 PANK4Q9NVE7 773 aa10.81□□□□□ -0.68
PSEN1-213ENST00000555386 KBTBD4Q9NVX7 518 aa10.81□□□□□ -0.68
PSEN1-213ENST00000555386 IFNKQ9P0W0 207 aa10.81□□□□□ -0.68
PSEN1-213ENST00000555386 LARSQ9P2J5 1176 aaKnown RBP10.81□□□□□ -0.68
PSEN1-213ENST00000555386 LRFN2Q9ULH4 789 aa10.81□□□□□ -0.68
PSEN1-213ENST00000555386 ODF2LQ9ULJ1 636 aa10.81□□□□□ -0.68
PSEN1-213ENST00000555386 PCDHA5Q9Y5H7 936 aa10.81□□□□□ -0.68
PSEN1-213ENST00000555386 TRIP11Q15643 1979 aa10.81□□□□□ -0.68
PSEN1-213ENST00000555386 TSPAN1O60635 241 aa10.81□□□□□ -0.68
PSEN1-213ENST00000555386 SMC2O95347 1197 aa10.81□□□□□ -0.68
PSEN1-213ENST00000555386 HARSP12081 509 aaKnown RBP10.81□□□□□ -0.68
PSEN1-213ENST00000555386 PBX2P40425 430 aa10.81□□□□□ -0.68
PSEN1-213ENST00000555386 CCZ1BP86790 482 aa10.81□□□□□ -0.68
PSEN1-213ENST00000555386 CCZ1P86791 482 aaPredicted RBP10.81□□□□□ -0.68
PSEN1-213ENST00000555386 FANCCQ00597 558 aa10.81□□□□□ -0.68
PSEN1-213ENST00000555386 PDAP1Q13442 181 aaKnown RBP10.81□□□□□ -0.68
PSEN1-213ENST00000555386 PRPF4BQ13523 1007 aaKnown RBP10.81□□□□□ -0.68
PSEN1-213ENST00000555386 PAN2Q504Q3 1202 aaKnown RBP10.81□□□□□ -0.68
PSEN1-213ENST00000555386 ZC2HC1CQ53FD0 456 aaPredicted RBP10.81□□□□□ -0.68
PSEN1-213ENST00000555386 CDCA2Q69YH5 1023 aaPredicted RBP10.81□□□□□ -0.68
PSEN1-213ENST00000555386 CCDC65Q8IXS2 484 aa10.81□□□□□ -0.68
PSEN1-213ENST00000555386 SMARCE1Q969G3 411 aa10.81□□□□□ -0.68
PSEN1-213ENST00000555386 BICD1Q96G01 975 aa10.81□□□□□ -0.68
PSEN1-213ENST00000555386 LRRC27Q9C0I9 530 aa10.81□□□□□ -0.68
PSEN1-213ENST00000555386 AGPAT5Q9NUQ2 364 aa10.81□□□□□ -0.68
PSEN1-213ENST00000555386 PRMT7Q9NVM4 692 aaPredicted RBP10.81□□□□□ -0.68
PSEN1-213ENST00000555386 TLL1O43897 1013 aa10.8□□□□□ -0.68
PSEN1-213ENST00000555386 EFCAB14O75071 495 aa10.8□□□□□ -0.68
PSEN1-213ENST00000555386 GCNT3O95395 438 aa10.8□□□□□ -0.68
PSEN1-213ENST00000555386 NPTXRO95502 500 aa10.8□□□□□ -0.68
PSEN1-213ENST00000555386 EDN1P05305 212 aa10.8□□□□□ -0.68
PSEN1-213ENST00000555386 ARF4P18085 180 aaPredicted RBP10.8□□□□□ -0.68
PSEN1-213ENST00000555386 ERCC5P28715 1186 aaPredicted RBP10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms