RNA–Protein interactions for RNA: ENST00000555254.5

PSEN1-212, Transcript of presenilin 1, humanhuman

TSL 3

Gene PSEN1, Length 754 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-212ENST00000555254 SHHQ15465 462 aa19.28■□□□□ 0.68
PSEN1-212ENST00000555254 LRRC55Q6ZSA7 311 aa19.28■□□□□ 0.68
PSEN1-212ENST00000555254 KSR1Q8IVT5 923 aa19.28■□□□□ 0.68
PSEN1-212ENST00000555254 TDHQ8IZJ6 230 aa19.28■□□□□ 0.68
PSEN1-212ENST00000555254 BICD1Q96G01 975 aa19.28■□□□□ 0.68
PSEN1-212ENST00000555254 MAP7D2Q96T17 732 aa19.28■□□□□ 0.68
PSEN1-212ENST00000555254 TUBGCP2Q9BSJ2 902 aa19.28■□□□□ 0.68
PSEN1-212ENST00000555254 METTL14Q9HCE5 456 aaKnown RBP19.28■□□□□ 0.68
PSEN1-212ENST00000555254 CLIC2O15247 247 aa19.27■□□□□ 0.68
PSEN1-212ENST00000555254 SLC16A3O15427 465 aaKnown RBP19.27■□□□□ 0.68
PSEN1-212ENST00000555254 TGFB1I1O43294 461 aa19.27■□□□□ 0.68
PSEN1-212ENST00000555254 KCNA1Q09470 495 aa19.27■□□□□ 0.68
PSEN1-212ENST00000555254 LAMTOR4Q0VGL1 99 aa19.27■□□□□ 0.68
PSEN1-212ENST00000555254 NR1I3Q14994 352 aa19.27■□□□□ 0.68
PSEN1-212ENST00000555254 C9orf50Q5SZB4 431 aa19.27■□□□□ 0.68
PSEN1-212ENST00000555254 FKBP15Q5T1M5 1219 aa19.27■□□□□ 0.68
PSEN1-212ENST00000555254 CEP135Q66GS9 1140 aa19.27■□□□□ 0.68
PSEN1-212ENST00000555254 MTHFD1LQ6UB35 978 aa19.27■□□□□ 0.68
PSEN1-212ENST00000555254 DEFB128Q7Z7B8 93 aa19.27■□□□□ 0.68
PSEN1-212ENST00000555254 SERINC5Q86VE9 423 aa19.27■□□□□ 0.68
PSEN1-212ENST00000555254 ZC3H3Q8IXZ2 948 aaKnown RBP19.27■□□□□ 0.68
PSEN1-212ENST00000555254 LRRC71Q8N4P6 559 aa19.27■□□□□ 0.68
PSEN1-212ENST00000555254 WNT8BQ93098 351 aa19.27■□□□□ 0.68
PSEN1-212ENST00000555254 ZBTB10Q96DT7 871 aa19.27■□□□□ 0.68
PSEN1-212ENST00000555254 EEF2KMTQ96G04 330 aa19.27■□□□□ 0.68
PSEN1-212ENST00000555254 KIFC3Q9BVG8 833 aa19.27■□□□□ 0.68
PSEN1-212ENST00000555254 TMEM134Q9H6X4 195 aa19.27■□□□□ 0.68
PSEN1-212ENST00000555254 RTN4Q9NQC3 1192 aaKnown RBP19.27■□□□□ 0.68
PSEN1-212ENST00000555254 AGPAT3Q9NRZ7 376 aa19.27■□□□□ 0.68
PSEN1-212ENST00000555254 ARHGAP28Q9P2N2 729 aa19.27■□□□□ 0.68
PSEN1-212ENST00000555254 IMPACTQ9P2X3 320 aa19.27■□□□□ 0.68
PSEN1-212ENST00000555254 PITPNM1O00562 1244 aa19.26■□□□□ 0.67
PSEN1-212ENST00000555254 IQCF3P0C7M6 154 aa19.26■□□□□ 0.67
PSEN1-212ENST00000555254 SRGAP2CP0DJJ0 459 aa19.26■□□□□ 0.67
PSEN1-212ENST00000555254 CKBP12277 381 aa19.26■□□□□ 0.67
PSEN1-212ENST00000555254 PSMC2P35998 433 aaKnown RBP19.26■□□□□ 0.67
PSEN1-212ENST00000555254 CDC42EP1Q00587 391 aa19.26■□□□□ 0.67
PSEN1-212ENST00000555254 UBXN1Q04323 297 aa19.26■□□□□ 0.67
PSEN1-212ENST00000555254 PPP2R3AQ06190 1150 aa19.26■□□□□ 0.67
PSEN1-212ENST00000555254 MAN2A1Q16706 1144 aa19.26■□□□□ 0.67
PSEN1-212ENST00000555254 C16orf59Q7L2K0 433 aa19.26■□□□□ 0.67
PSEN1-212ENST00000555254 TMC6Q7Z403 805 aa19.26■□□□□ 0.67
PSEN1-212ENST00000555254 FRMD5Q7Z6J6 570 aa19.26■□□□□ 0.67
PSEN1-212ENST00000555254 RHPN2Q8IUC4 686 aa19.26■□□□□ 0.67
PSEN1-212ENST00000555254 SLC9A9Q8IVB4 645 aa19.26■□□□□ 0.67
PSEN1-212ENST00000555254 MAP4K3Q8IVH8 894 aa19.26■□□□□ 0.67
PSEN1-212ENST00000555254 CAGE1Q8TC20 777 aa19.26■□□□□ 0.67
PSEN1-212ENST00000555254 IL23AQ9NPF7 189 aa19.26■□□□□ 0.67
PSEN1-212ENST00000555254 ARMCX3Q9UH62 379 aaPredicted RBP19.26■□□□□ 0.67
PSEN1-212ENST00000555254 AKT3Q9Y243 479 aa19.26■□□□□ 0.67
PSEN1-212ENST00000555254 STXBP5LQ9Y2K9 1186 aa19.26■□□□□ 0.67
PSEN1-212ENST00000555254 LGALS16A8MUM7 142 aa19.25■□□□□ 0.67
PSEN1-212ENST00000555254 EXOC3O60645 756 aa19.25■□□□□ 0.67
PSEN1-212ENST00000555254 SELPP16109 830 aa19.25■□□□□ 0.67
PSEN1-212ENST00000555254 HOXC8P31273 242 aa19.25■□□□□ 0.67
PSEN1-212ENST00000555254 PHKA2P46019 1235 aa19.25■□□□□ 0.67
PSEN1-212ENST00000555254 LIG4P49917 911 aa19.25■□□□□ 0.67
PSEN1-212ENST00000555254 CYP2J2P51589 502 aa19.25■□□□□ 0.67
PSEN1-212ENST00000555254 CLCN3P51790 818 aa19.25■□□□□ 0.67
PSEN1-212ENST00000555254 CAPSQ13938 189 aa19.25■□□□□ 0.67
PSEN1-212ENST00000555254 TRIM71Q2Q1W2 868 aaKnown RBP19.25■□□□□ 0.67
PSEN1-212ENST00000555254 ZNF618Q5T7W0 954 aa19.25■□□□□ 0.67
PSEN1-212ENST00000555254 ARMCX5Q6P1M9 558 aa19.25■□□□□ 0.67
PSEN1-212ENST00000555254 RUFY4Q6ZNE9 571 aa19.25■□□□□ 0.67
PSEN1-212ENST00000555254 ZNF365Q70YC5 407 aa19.25■□□□□ 0.67
PSEN1-212ENST00000555254 Q7L0L9 218 aa19.25■□□□□ 0.67
PSEN1-212ENST00000555254 VSTM4Q8IW00 320 aa19.25■□□□□ 0.67
PSEN1-212ENST00000555254 C12orf56Q8IXR9 622 aa19.25■□□□□ 0.67
PSEN1-212ENST00000555254 RPUSD2Q8IZ73 545 aaKnown RBP19.25■□□□□ 0.67
PSEN1-212ENST00000555254 RNF149Q8NC42 400 aa19.25■□□□□ 0.67
PSEN1-212ENST00000555254 KCNN1Q92952 543 aa19.25■□□□□ 0.67
PSEN1-212ENST00000555254 MKNK1Q9BUB5 465 aa19.25■□□□□ 0.67
PSEN1-212ENST00000555254 PRDM6Q9NQX0 595 aa19.25■□□□□ 0.67
PSEN1-212ENST00000555254 WDR81Q562E7 1941 aa19.24■□□□□ 0.67
PSEN1-212ENST00000555254 ZMYM2Q9UBW7 1377 aa19.24■□□□□ 0.67
PSEN1-212ENST00000555254 A0A1W2PPC1 479 aa19.24■□□□□ 0.67
PSEN1-212ENST00000555254 FGBP02675 491 aa19.24■□□□□ 0.67
PSEN1-212ENST00000555254 TPM1P09493 284 aa19.24■□□□□ 0.67
PSEN1-212ENST00000555254 CTSHP09668 335 aa19.24■□□□□ 0.67
PSEN1-212ENST00000555254 GSDMDP57764 484 aa19.24■□□□□ 0.67
PSEN1-212ENST00000555254 ADAM17P78536 824 aa19.24■□□□□ 0.67
PSEN1-212ENST00000555254 POU5F1BQ06416 359 aa19.24■□□□□ 0.67
PSEN1-212ENST00000555254 MKRN4PQ13434 485 aaPredicted RBP19.24■□□□□ 0.67
PSEN1-212ENST00000555254 VWA3BQ502W6 1294 aa19.24■□□□□ 0.67
PSEN1-212ENST00000555254 MARCH8Q5T0T0 291 aa19.24■□□□□ 0.67
PSEN1-212ENST00000555254 SLFN12LQ6IEE8 588 aa19.24■□□□□ 0.67
PSEN1-212ENST00000555254 LRRC8DQ7L1W4 858 aa19.24■□□□□ 0.67
PSEN1-212ENST00000555254 APTXQ7Z2E3 356 aaKnown RBP19.24■□□□□ 0.67
PSEN1-212ENST00000555254 FAM186BQ8IYM0 893 aa19.24■□□□□ 0.67
PSEN1-212ENST00000555254 RNPC3Q96LT9 517 aaKnown RBP19.24■□□□□ 0.67
PSEN1-212ENST00000555254 SCLT1Q96NL6 688 aa19.24■□□□□ 0.67
PSEN1-212ENST00000555254 BUD13Q9BRD0 619 aaKnown RBP eCLIP19.24■□□□□ 0.675e-12■□□□□ 10.8
PSEN1-212ENST00000555254 FAM49AQ9H0Q0 323 aaPredicted RBP19.24■□□□□ 0.67
PSEN1-212ENST00000555254 DMAC2Q9NW81 257 aa19.24■□□□□ 0.67
PSEN1-212ENST00000555254 UTP18Q9Y5J1 556 aaKnown RBP eCLIP19.24■□□□□ 0.67
PSEN1-212ENST00000555254 RBAK-RBAKDNI3L0D1 243 aa19.23■□□□□ 0.67
PSEN1-212ENST00000555254 HNRNPDLO14979 420 aaKnown RBP19.23■□□□□ 0.67
PSEN1-212ENST00000555254 KRT13P13646 458 aa19.23■□□□□ 0.67
PSEN1-212ENST00000555254 MARSP56192 900 aaKnown RBP19.23■□□□□ 0.67
PSEN1-212ENST00000555254 DRP2Q13474 957 aa19.23■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 71.7 ms