RNA–Protein interactions for RNA: ENST00000554819.5

SCFD1-214, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 608 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-214ENST00000554819 GPR156Q8NFN8 814 aa5.42□□□□□ -1.54
SCFD1-214ENST00000554819 MTMR8Q96EF0 704 aa5.42□□□□□ -1.54
SCFD1-214ENST00000554819 BORCS6Q96GS4 357 aa5.42□□□□□ -1.54
SCFD1-214ENST00000554819 GPATCH3Q96I76 525 aa5.42□□□□□ -1.54
SCFD1-214ENST00000554819 FAXDC2Q96IV6 333 aa5.42□□□□□ -1.54
SCFD1-214ENST00000554819 ZNF512Q96ME7 567 aaPredicted RBP5.42□□□□□ -1.54
SCFD1-214ENST00000554819 EPC1Q9H2F5 836 aa5.42□□□□□ -1.54
SCFD1-214ENST00000554819 TLR9Q9NR96 1032 aa5.42□□□□□ -1.54
SCFD1-214ENST00000554819 MKS1Q9NXB0 559 aa5.42□□□□□ -1.54
SCFD1-214ENST00000554819 TRHDEQ9UKU6 1024 aa5.42□□□□□ -1.54
SCFD1-214ENST00000554819 SPEF1Q9Y4P9 236 aa5.42□□□□□ -1.54
SCFD1-214ENST00000554819 GPR45Q9Y5Y3 372 aa5.42□□□□□ -1.54
SCFD1-214ENST00000554819 MRFAP1Q9Y605 127 aa5.42□□□□□ -1.54
SCFD1-214ENST00000554819 SHTN1A0MZ66 631 aa5.41□□□□□ -1.54
SCFD1-214ENST00000554819 CAPN14A8MX76 684 aa5.41□□□□□ -1.54
SCFD1-214ENST00000554819 TMEM127O75204 238 aa5.41□□□□□ -1.54
SCFD1-214ENST00000554819 MYBL2P10244 700 aa5.41□□□□□ -1.54
SCFD1-214ENST00000554819 AGXTP21549 392 aa5.41□□□□□ -1.54
SCFD1-214ENST00000554819 CASRP41180 1078 aa5.41□□□□□ -1.54
SCFD1-214ENST00000554819 IGBP1P78318 339 aa5.41□□□□□ -1.54
SCFD1-214ENST00000554819 CCT2P78371 535 aaKnown RBP5.41□□□□□ -1.54
SCFD1-214ENST00000554819 CLUL1Q15846 466 aa5.41□□□□□ -1.54
SCFD1-214ENST00000554819 MBNL2Q5VZF2 373 aaKnown RBP5.41□□□□□ -1.54
SCFD1-214ENST00000554819 PDZD4Q76G19 769 aaPredicted RBP5.41□□□□□ -1.54
SCFD1-214ENST00000554819 CBARPQ8N350 705 aaPredicted RBP5.41□□□□□ -1.54
SCFD1-214ENST00000554819 ABCF1Q8NE71 845 aaKnown RBP eCLIP5.41□□□□□ -1.54
SCFD1-214ENST00000554819 RIN2Q8WYP3 895 aaPredicted RBP5.41□□□□□ -1.54
SCFD1-214ENST00000554819 MIEF2Q96C03 454 aa5.41□□□□□ -1.54
SCFD1-214ENST00000554819 IL17RAQ96F46 866 aa5.41□□□□□ -1.54
SCFD1-214ENST00000554819 CDC5LQ99459 802 aaKnown RBP5.41□□□□□ -1.54
SCFD1-214ENST00000554819 ADI1Q9BV57 179 aa5.41□□□□□ -1.54
SCFD1-214ENST00000554819 KRTAP3-1Q9BYR8 98 aa5.41□□□□□ -1.54
SCFD1-214ENST00000554819 ENKD1Q9H0I2 346 aa5.41□□□□□ -1.54
SCFD1-214ENST00000554819 RBM12Q9NTZ6 932 aaKnown RBP5.41□□□□□ -1.54
SCFD1-214ENST00000554819 HECAQ9UBI9 543 aaPredicted RBP5.41□□□□□ -1.54
SCFD1-214ENST00000554819 SH3BP1Q9Y3L3 701 aa5.41□□□□□ -1.54
SCFD1-214ENST00000554819 KLHL33A6NCF5 533 aa5.4□□□□□ -1.54
SCFD1-214ENST00000554819 C1QTNF3-AMACRE9PGA6 284 aa5.4□□□□□ -1.54
SCFD1-214ENST00000554819 HOXA3O43365 443 aaPredicted RBP5.4□□□□□ -1.54
SCFD1-214ENST00000554819 AKR1B10O60218 316 aa5.4□□□□□ -1.54
SCFD1-214ENST00000554819 IPO13O94829 963 aaKnown RBP5.4□□□□□ -1.54
SCFD1-214ENST00000554819 RBP3P10745 1247 aa5.4□□□□□ -1.54
SCFD1-214ENST00000554819 OSMP13725 252 aa5.4□□□□□ -1.54
SCFD1-214ENST00000554819 GNAT2P19087 354 aa5.4□□□□□ -1.54
SCFD1-214ENST00000554819 CRHR1P34998 444 aa5.4□□□□□ -1.54
SCFD1-214ENST00000554819 IARSP41252 1262 aaKnown RBP5.4□□□□□ -1.54
SCFD1-214ENST00000554819 GZMKP49863 264 aa5.4□□□□□ -1.54
SCFD1-214ENST00000554819 KRT85P78386 507 aa5.4□□□□□ -1.54
SCFD1-214ENST00000554819 MALLQ13021 153 aa5.4□□□□□ -1.54
SCFD1-214ENST00000554819 MRPL49Q13405 166 aaKnown RBP5.4□□□□□ -1.54
SCFD1-214ENST00000554819 R3HDM1Q15032 1099 aaKnown RBP5.4□□□□□ -1.54
SCFD1-214ENST00000554819 ELAVL1Q15717 326 aaKnown RBP5.4□□□□□ -1.54
SCFD1-214ENST00000554819 APBB1IPQ7Z5R6 666 aaPredicted RBP5.4□□□□□ -1.54
SCFD1-214ENST00000554819 PALM2Q8IXS6 379 aa5.4□□□□□ -1.54
SCFD1-214ENST00000554819 ZNF808Q8N4W9 903 aaPredicted RBP5.4□□□□□ -1.54
SCFD1-214ENST00000554819 ZNF480Q8WV37 535 aa5.4□□□□□ -1.54
SCFD1-214ENST00000554819 CCDC8Q9H0W5 538 aaPredicted RBP5.4□□□□□ -1.54
SCFD1-214ENST00000554819 ZNF277Q9NRM2 450 aaPredicted RBP5.4□□□□□ -1.54
SCFD1-214ENST00000554819 GPRC5DQ9NZD1 345 aa5.4□□□□□ -1.54
SCFD1-214ENST00000554819 GIT1Q9Y2X7 761 aa5.4□□□□□ -1.54
SCFD1-214ENST00000554819 GABRDO14764 452 aa5.39□□□□□ -1.55
SCFD1-214ENST00000554819 ITGA10O75578 1167 aa5.39□□□□□ -1.55
SCFD1-214ENST00000554819 MT-CO1P00395 513 aa5.39□□□□□ -1.55
SCFD1-214ENST00000554819 APBA1Q02410 837 aa5.39□□□□□ -1.55
SCFD1-214ENST00000554819 FAM83AQ86UY5 434 aa5.39□□□□□ -1.55
SCFD1-214ENST00000554819 ST8SIA2Q92186 375 aa5.39□□□□□ -1.55
SCFD1-214ENST00000554819 FUBP3Q96I24 572 aaKnown RBP eCLIP5.39□□□□□ -1.55
SCFD1-214ENST00000554819 PDCD2LQ9BRP1 358 aa5.39□□□□□ -1.55
SCFD1-214ENST00000554819 KRTAP4-5Q9BYR2 181 aa5.39□□□□□ -1.55
SCFD1-214ENST00000554819 AURKAIP1Q9NWT8 199 aaPredicted RBP5.39□□□□□ -1.55
SCFD1-214ENST00000554819 SCOCQ9UIL1 159 aa5.39□□□□□ -1.55
SCFD1-214ENST00000554819 HDAC5Q9UQL6 1122 aa5.39□□□□□ -1.55
SCFD1-214ENST00000554819 PCDHGA2Q9Y5H1 932 aa5.39□□□□□ -1.55
SCFD1-214ENST00000554819 HSP90B1P14625 803 aaKnown RBP5.38□□□□□ -1.55
SCFD1-214ENST00000554819 GSPT1P15170 499 aaKnown RBP5.38□□□□□ -1.55
SCFD1-214ENST00000554819 CCND1P24385 295 aa5.38□□□□□ -1.55
SCFD1-214ENST00000554819 ECHS1P30084 290 aa5.38□□□□□ -1.55
SCFD1-214ENST00000554819 ADSLP30566 484 aaPredicted RBP5.38□□□□□ -1.55
SCFD1-214ENST00000554819 MCAMP43121 646 aa5.38□□□□□ -1.55
SCFD1-214ENST00000554819 EXOSC10Q01780 885 aaKnown RBP5.38□□□□□ -1.55
SCFD1-214ENST00000554819 ACAP2Q15057 778 aa5.38□□□□□ -1.55
SCFD1-214ENST00000554819 ABCB5Q2M3G0 1257 aa5.38□□□□□ -1.55
SCFD1-214ENST00000554819 MST1LQ2TV78 715 aa5.38□□□□□ -1.55
SCFD1-214ENST00000554819 METTL24Q5JXM2 366 aa5.38□□□□□ -1.55
SCFD1-214ENST00000554819 SPTY2D1Q68D10 685 aaPredicted RBP5.38□□□□□ -1.55
SCFD1-214ENST00000554819 MDGA1Q8NFP4 955 aa5.38□□□□□ -1.55
SCFD1-214ENST00000554819 SLC13A1Q9BZW2 595 aa5.38□□□□□ -1.55
SCFD1-214ENST00000554819 BCO1Q9HAY6 547 aa5.38□□□□□ -1.55
SCFD1-214ENST00000554819 TYW1Q9NV66 732 aaKnown RBP5.38□□□□□ -1.55
SCFD1-214ENST00000554819 SAP30BPQ9UHR5 308 aaKnown RBP5.38□□□□□ -1.55
SCFD1-214ENST00000554819 CLCA2Q9UQC9 943 aa5.38□□□□□ -1.55
SCFD1-214ENST00000554819 MYRFQ9Y2G1 1151 aa5.38□□□□□ -1.55
SCFD1-214ENST00000554819 FAM171A2A8MVW0 826 aa5.37□□□□□ -1.55
SCFD1-214ENST00000554819 XPOTO43592 962 aaKnown RBP5.37□□□□□ -1.55
SCFD1-214ENST00000554819 ENDOD1O94919 500 aa5.37□□□□□ -1.55
SCFD1-214ENST00000554819 ACRV1P26436 265 aa5.37□□□□□ -1.55
SCFD1-214ENST00000554819 PER3P56645 1201 aa5.37□□□□□ -1.55
SCFD1-214ENST00000554819 CRHR2Q13324 411 aa5.37□□□□□ -1.55
SCFD1-214ENST00000554819 NOMO1Q15155 1222 aa5.37□□□□□ -1.55
SCFD1-214ENST00000554819 CDSNQ15517 529 aa5.37□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms