RNA–Protein interactions for RNA: ENST00000554659.5

VTI1B-204, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VTI1B, Length 5,351 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-204ENST00000554659 QRICH1Q2TAL8 776 aa14.82□□□□□ -0.04
VTI1B-204ENST00000554659 SPATA21Q7Z572 469 aa14.82□□□□□ -0.04
VTI1B-204ENST00000554659 SRBD1Q8N5C6 995 aaKnown RBP14.82□□□□□ -0.04
VTI1B-204ENST00000554659 RMDN3Q96TC7 470 aa14.82□□□□□ -0.04
VTI1B-204ENST00000554659 UBN1Q9NPG3 1134 aa14.82□□□□□ -0.04
VTI1B-204ENST00000554659 DONSONQ9NYP3 566 aa14.82□□□□□ -0.04
VTI1B-204ENST00000554659 HPCAL4Q9UM19 191 aa14.82□□□□□ -0.04
VTI1B-204ENST00000554659 ZCCHC11Q5TAX3 1644 aaKnown RBP14.82□□□□□ -0.04
VTI1B-204ENST00000554659 FXR1P51114 621 aaKnown RBP eCLIP14.82□□□□□ -0.04
VTI1B-204ENST00000554659 TAP1Q03518 808 aa14.82□□□□□ -0.04
VTI1B-204ENST00000554659 KRT17Q04695 432 aa14.82□□□□□ -0.04
VTI1B-204ENST00000554659 KIAA1755Q5JYT7 1200 aa14.82□□□□□ -0.04
VTI1B-204ENST00000554659 ELOA2Q8IYF1 753 aaPredicted RBP14.82□□□□□ -0.04
VTI1B-204ENST00000554659 ARHGAP18Q8N392 663 aa14.82□□□□□ -0.04
VTI1B-204ENST00000554659 KIFC3Q9BVG8 833 aa14.82□□□□□ -0.04
VTI1B-204ENST00000554659 ARL2BPQ9Y2Y0 163 aa14.82□□□□□ -0.04
VTI1B-204ENST00000554659 SYCE1LA8MT33 242 aa14.82□□□□□ -0.04
VTI1B-204ENST00000554659 ASAP2O43150 1006 aa14.82□□□□□ -0.04
VTI1B-204ENST00000554659 YWHAHQ04917 246 aaPredicted RBP14.82□□□□□ -0.04
VTI1B-204ENST00000554659 SCARF1Q14162 830 aa14.82□□□□□ -0.04
VTI1B-204ENST00000554659 ABI1Q8IZP0 508 aa14.82□□□□□ -0.04
VTI1B-204ENST00000554659 OLA1Q9NTK5 396 aaKnown RBP14.82□□□□□ -0.04
VTI1B-204ENST00000554659 RTN2O75298 545 aa14.81□□□□□ -0.04
VTI1B-204ENST00000554659 E2F6O75461 281 aa14.81□□□□□ -0.04
VTI1B-204ENST00000554659 EYA4O95677 639 aa14.81□□□□□ -0.04
VTI1B-204ENST00000554659 ZSCAN20P17040 1043 aaPredicted RBP14.81□□□□□ -0.04
VTI1B-204ENST00000554659 DAB2P98082 770 aa14.81□□□□□ -0.04
VTI1B-204ENST00000554659 RGS9BPQ6ZS82 235 aa14.81□□□□□ -0.04
VTI1B-204ENST00000554659 FAM161BQ96MY7 647 aa14.81□□□□□ -0.04
VTI1B-204ENST00000554659 VPS11Q9H270 941 aa14.81□□□□□ -0.04
VTI1B-204ENST00000554659 FAM8A1Q9UBU6 413 aa14.81□□□□□ -0.04
VTI1B-204ENST00000554659 HEY1Q9Y5J3 304 aa14.81□□□□□ -0.04
VTI1B-204ENST00000554659 ZNF335Q9H4Z2 1342 aaPredicted RBP14.81□□□□□ -0.04
VTI1B-204ENST00000554659 DNAJC6O75061 913 aa14.81□□□□□ -0.04
VTI1B-204ENST00000554659 RAD23BP54727 409 aa14.81□□□□□ -0.04
VTI1B-204ENST00000554659 IGDCC4Q8TDY8 1250 aa14.81□□□□□ -0.04
VTI1B-204ENST00000554659 EIF2AK1Q9BQI3 630 aaKnown RBP14.81□□□□□ -0.04
VTI1B-204ENST00000554659 CRB1P82279 1406 aa14.81□□□□□ -0.04
VTI1B-204ENST00000554659 USP31Q70CQ4 1352 aa14.81□□□□□ -0.04
VTI1B-204ENST00000554659 QRICH2Q9H0J4 1663 aa14.81□□□□□ -0.04
VTI1B-204ENST00000554659 EMSYQ7Z589 1322 aa14.81□□□□□ -0.04
VTI1B-204ENST00000554659 SLC26A4O43511 780 aa14.81□□□□□ -0.04
VTI1B-204ENST00000554659 SDC4P31431 198 aa14.81□□□□□ -0.04
VTI1B-204ENST00000554659 STAT3P40763 770 aa14.81□□□□□ -0.04
VTI1B-204ENST00000554659 SYNE4Q8N205 404 aa14.81□□□□□ -0.04
VTI1B-204ENST00000554659 EXT2Q93063 718 aa14.81□□□□□ -0.04
VTI1B-204ENST00000554659 BTBD6Q96KE9 485 aa14.81□□□□□ -0.04
VTI1B-204ENST00000554659 DACH2Q96NX9 599 aa14.81□□□□□ -0.04
VTI1B-204ENST00000554659 OLFM3Q96PB7 478 aa14.81□□□□□ -0.04
VTI1B-204ENST00000554659 ZBTB18Q99592 522 aa14.81□□□□□ -0.04
VTI1B-204ENST00000554659 TRPV6Q9H1D0 765 aa14.81□□□□□ -0.04
VTI1B-204ENST00000554659 ABCF3Q9NUQ8 709 aa14.81□□□□□ -0.04
VTI1B-204ENST00000554659 RAD17O75943 681 aa14.81□□□□□ -0.04
VTI1B-204ENST00000554659 ATXN8OSP0DMR3 200 aa14.81□□□□□ -0.04
VTI1B-204ENST00000554659 PPARGP37231 505 aaPredicted RBP14.81□□□□□ -0.04
VTI1B-204ENST00000554659 GPC3P51654 580 aa14.81□□□□□ -0.04
VTI1B-204ENST00000554659 ROR1Q01973 937 aa14.81□□□□□ -0.04
VTI1B-204ENST00000554659 RAD9BQ6WBX8 426 aa14.81□□□□□ -0.04
VTI1B-204ENST00000554659 ANO5Q75V66 913 aa14.81□□□□□ -0.04
VTI1B-204ENST00000554659 EEPD1Q7L9B9 569 aa14.81□□□□□ -0.04
VTI1B-204ENST00000554659 CCT8L2Q96SF2 557 aa14.81□□□□□ -0.04
VTI1B-204ENST00000554659 LXNQ9BS40 222 aa14.81□□□□□ -0.04
VTI1B-204ENST00000554659 PLA2G12BQ9BX93 195 aa14.81□□□□□ -0.04
VTI1B-204ENST00000554659 NARFQ9UHQ1 456 aa14.81□□□□□ -0.04
VTI1B-204ENST00000554659 SPHKAPQ2M3C7 1700 aa14.8□□□□□ -0.04
VTI1B-204ENST00000554659 hCG_2014768A0A024R1R8 64 aa14.8□□□□□ -0.04
VTI1B-204ENST00000554659 TRIM49P0CI25 452 aa14.8□□□□□ -0.04
VTI1B-204ENST00000554659 TRIM49CP0CI26 452 aa14.8□□□□□ -0.04
VTI1B-204ENST00000554659 HABP4Q5JVS0 413 aaKnown RBP14.8□□□□□ -0.04
VTI1B-204ENST00000554659 AGBL2Q5U5Z8 902 aa14.8□□□□□ -0.04
VTI1B-204ENST00000554659 NYAP1Q6ZVC0 841 aa14.8□□□□□ -0.04
VTI1B-204ENST00000554659 CDKL3Q8IVW4 592 aaPredicted RBP14.8□□□□□ -0.04
VTI1B-204ENST00000554659 TTC39CQ8N584 583 aa14.8□□□□□ -0.04
VTI1B-204ENST00000554659 ATL2Q8NHH9 583 aa14.8□□□□□ -0.04
VTI1B-204ENST00000554659 C1orf54Q8WWF1 131 aa14.8□□□□□ -0.04
VTI1B-204ENST00000554659 NCLNQ969V3 563 aa14.8□□□□□ -0.04
VTI1B-204ENST00000554659 COL15A1P39059 1388 aa14.8□□□□□ -0.04
VTI1B-204ENST00000554659 A0A1W2PQJ5 194 aa14.8□□□□□ -0.04
VTI1B-204ENST00000554659 KITP10721 976 aa14.8□□□□□ -0.04
VTI1B-204ENST00000554659 EPHB1P54762 984 aa14.8□□□□□ -0.04
VTI1B-204ENST00000554659 STXBP2Q15833 593 aa14.8□□□□□ -0.04
VTI1B-204ENST00000554659 SLC27A3Q5K4L6 730 aa14.8□□□□□ -0.04
VTI1B-204ENST00000554659 MTRQ99707 1265 aa14.8□□□□□ -0.04
VTI1B-204ENST00000554659 SLC9A2Q9UBY0 812 aa14.8□□□□□ -0.04
VTI1B-204ENST00000554659 SMG5Q9UPR3 1016 aaKnown RBP14.8□□□□□ -0.04
VTI1B-204ENST00000554659 SETBP1Q9Y6X0 1596 aa14.8□□□□□ -0.04
VTI1B-204ENST00000554659 PI4K2BG5E9Z4 385 aa14.8□□□□□ -0.04
VTI1B-204ENST00000554659 PHF2O75151 1096 aa14.8□□□□□ -0.04
VTI1B-204ENST00000554659 FGFR4P22455 802 aa14.8□□□□□ -0.04
VTI1B-204ENST00000554659 KCNQ4P56696 695 aa14.8□□□□□ -0.04
VTI1B-204ENST00000554659 PSMC5P62195 406 aa14.8□□□□□ -0.04
VTI1B-204ENST00000554659 OSBPL1AQ9BXW6 950 aa14.8□□□□□ -0.04
VTI1B-204ENST00000554659 TUFT1Q9NNX1 390 aa14.8□□□□□ -0.04
VTI1B-204ENST00000554659 PARVAQ9NVD7 372 aa14.8□□□□□ -0.04
VTI1B-204ENST00000554659 SNX5Q9Y5X3 404 aa14.8□□□□□ -0.04
VTI1B-204ENST00000554659 DYNC1LI1Q9Y6G9 523 aaKnown RBP14.8□□□□□ -0.04
VTI1B-204ENST00000554659 ALKQ9UM73 1620 aa14.8□□□□□ -0.04
VTI1B-204ENST00000554659 GTPBP10A4D1E9 387 aaKnown RBP14.8□□□□□ -0.04
VTI1B-204ENST00000554659 RANBP1P43487 201 aa14.8□□□□□ -0.04
VTI1B-204ENST00000554659 AP3M2P53677 418 aa14.8□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms