RNA–Protein interactions for RNA: ENST00000554486.1

SCFD1-212, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 819 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-212ENST00000554486 HSCBQ8IWL3 235 aa7.29□□□□□ -1.24
SCFD1-212ENST00000554486 NECAB1Q8N987 351 aa7.29□□□□□ -1.24
SCFD1-212ENST00000554486 GMCL1P1Q8NEA9 526 aa7.29□□□□□ -1.24
SCFD1-212ENST00000554486 CHMP4CQ96CF2 233 aa7.29□□□□□ -1.24
SCFD1-212ENST00000554486 ZSCAN31Q96LW9 406 aaPredicted RBP7.29□□□□□ -1.24
SCFD1-212ENST00000554486 FGD4Q96M96 766 aa7.29□□□□□ -1.24
SCFD1-212ENST00000554486 LGR4Q9BXB1 951 aa7.29□□□□□ -1.24
SCFD1-212ENST00000554486 KIAA1683Q9H0B3 1180 aa7.29□□□□□ -1.24
SCFD1-212ENST00000554486 CCDC113Q9H0I3 377 aa7.29□□□□□ -1.24
SCFD1-212ENST00000554486 NCOA5Q9HCD5 579 aaKnown RBP7.29□□□□□ -1.24
SCFD1-212ENST00000554486 GFOD1Q9NXC2 390 aa7.29□□□□□ -1.24
SCFD1-212ENST00000554486 SNTG2Q9NY99 539 aa7.29□□□□□ -1.24
SCFD1-212ENST00000554486 NAP1L2Q9ULW6 460 aaPredicted RBP7.29□□□□□ -1.24
SCFD1-212ENST00000554486 SYNPO2Q9UMS6 1093 aa7.29□□□□□ -1.24
SCFD1-212ENST00000554486 PCDHB12Q9Y5F1 795 aa7.29□□□□□ -1.24
SCFD1-212ENST00000554486 TRIM75PA6NK02 468 aa7.28□□□□□ -1.24
SCFD1-212ENST00000554486 GOLGA8AA7E2F4 631 aa7.28□□□□□ -1.24
SCFD1-212ENST00000554486 F5H6K3 240 aa7.28□□□□□ -1.24
SCFD1-212ENST00000554486 DTNBO60941 627 aa7.28□□□□□ -1.24
SCFD1-212ENST00000554486 PDHBP11177 359 aa7.28□□□□□ -1.24
SCFD1-212ENST00000554486 ANP32AP39687 249 aaKnown RBP7.28□□□□□ -1.24
SCFD1-212ENST00000554486 METAP2P50579 478 aaKnown RBP eCLIP7.28□□□□□ -1.24
SCFD1-212ENST00000554486 BACE1P56817 501 aa7.28□□□□□ -1.24
SCFD1-212ENST00000554486 HUNKP57058 714 aa7.28□□□□□ -1.24
SCFD1-212ENST00000554486 CHMP4BP1P59074 171 aa7.28□□□□□ -1.24
SCFD1-212ENST00000554486 PPATQ06203 517 aa7.28□□□□□ -1.24
SCFD1-212ENST00000554486 KLRC3Q07444 240 aa7.28□□□□□ -1.24
SCFD1-212ENST00000554486 PPIL2Q13356 520 aa7.28□□□□□ -1.24
SCFD1-212ENST00000554486 IKZF1Q13422 519 aa7.28□□□□□ -1.24
SCFD1-212ENST00000554486 CUL4AQ13619 759 aa7.28□□□□□ -1.24
SCFD1-212ENST00000554486 SLC35G1Q2M3R5 365 aa7.28□□□□□ -1.24
SCFD1-212ENST00000554486 SLFN13Q68D06 897 aa7.28□□□□□ -1.24
SCFD1-212ENST00000554486 HEATR6Q6AI08 1181 aaKnown RBP7.28□□□□□ -1.24
SCFD1-212ENST00000554486 SLC23A3Q6PIS1 610 aa7.28□□□□□ -1.24
SCFD1-212ENST00000554486 SYNE3Q6ZMZ3 975 aa7.28□□□□□ -1.24
SCFD1-212ENST00000554486 SAPCD2Q86UD0 394 aa7.28□□□□□ -1.24
SCFD1-212ENST00000554486 ERO1BQ86YB8 467 aa7.28□□□□□ -1.24
SCFD1-212ENST00000554486 CCDC83Q8IWF9 413 aa7.28□□□□□ -1.24
SCFD1-212ENST00000554486 FANCBQ8NB91 859 aa7.28□□□□□ -1.24
SCFD1-212ENST00000554486 NUP133Q8WUM0 1156 aa7.28□□□□□ -1.24
SCFD1-212ENST00000554486 GTF3C6Q969F1 213 aa7.28□□□□□ -1.24
SCFD1-212ENST00000554486 UBE2FQ969M7 185 aa7.28□□□□□ -1.24
SCFD1-212ENST00000554486 OPTNQ96CV9 577 aa7.28□□□□□ -1.24
SCFD1-212ENST00000554486 WNK4Q96J92 1243 aa7.28□□□□□ -1.24
SCFD1-212ENST00000554486 MAP3K14Q99558 947 aa7.28□□□□□ -1.24
SCFD1-212ENST00000554486 NUP88Q99567 741 aaPredicted RBP7.28□□□□□ -1.24
SCFD1-212ENST00000554486 FEZ1Q99689 392 aa7.28□□□□□ -1.24
SCFD1-212ENST00000554486 SLKQ9H2G2 1235 aaPredicted RBP7.28□□□□□ -1.24
SCFD1-212ENST00000554486 VCPKMTQ9H867 229 aa7.28□□□□□ -1.24
SCFD1-212ENST00000554486 AS3MTQ9HBK9 375 aa7.28□□□□□ -1.24
SCFD1-212ENST00000554486 ATP13A1Q9HD20 1204 aa7.28□□□□□ -1.24
SCFD1-212ENST00000554486 MAD2L2Q9UI95 211 aa7.28□□□□□ -1.24
SCFD1-212ENST00000554486 PARP14Q460N5 1801 aa7.28□□□□□ -1.24
SCFD1-212ENST00000554486 MYH6P13533 1939 aa7.28□□□□□ -1.24
SCFD1-212ENST00000554486 LOC285556D6RIA3 1793 aa7.28□□□□□ -1.24
SCFD1-212ENST00000554486 RLFQ13129 1914 aa7.27□□□□□ -1.25
SCFD1-212ENST00000554486 ANKRD34BA5PLL1 514 aa7.27□□□□□ -1.25
SCFD1-212ENST00000554486 C19orf81C9J6K1 198 aa7.27□□□□□ -1.25
SCFD1-212ENST00000554486 CXCL11O14625 94 aa7.27□□□□□ -1.25
SCFD1-212ENST00000554486 PLEKHA8P1O95397 391 aa7.27□□□□□ -1.25
SCFD1-212ENST00000554486 CTDNEP1O95476 244 aa7.27□□□□□ -1.25
SCFD1-212ENST00000554486 CAPNS1P04632 268 aa7.27□□□□□ -1.25
SCFD1-212ENST00000554486 GOLGA8HP0CJ92 632 aa7.27□□□□□ -1.25
SCFD1-212ENST00000554486 CALM1P0DP23 149 aa7.27□□□□□ -1.25
SCFD1-212ENST00000554486 CALM2P0DP24 149 aa7.27□□□□□ -1.25
SCFD1-212ENST00000554486 CALM3P0DP25 149 aa7.27□□□□□ -1.25
SCFD1-212ENST00000554486 HMGCS2P54868 508 aa7.27□□□□□ -1.25
SCFD1-212ENST00000554486 ZNF543Q08ER8 600 aa7.27□□□□□ -1.25
SCFD1-212ENST00000554486 MOGSQ13724 837 aa7.27□□□□□ -1.25
SCFD1-212ENST00000554486 NTRK3Q16288 839 aa7.27□□□□□ -1.25
SCFD1-212ENST00000554486 SLC10A6Q3KNW5 377 aa7.27□□□□□ -1.25
SCFD1-212ENST00000554486 ASPRV1Q53RT3 343 aa7.27□□□□□ -1.25
SCFD1-212ENST00000554486 TMTC3Q6ZXV5 915 aa7.27□□□□□ -1.25
SCFD1-212ENST00000554486 TSPYL5Q86VY4 417 aaPredicted RBP7.27□□□□□ -1.25
SCFD1-212ENST00000554486 RASAL3Q86YV0 1011 aa7.27□□□□□ -1.25
SCFD1-212ENST00000554486 SPICE1Q8N0Z3 855 aa7.27□□□□□ -1.25
SCFD1-212ENST00000554486 SRBD1Q8N5C6 995 aaKnown RBP7.27□□□□□ -1.25
SCFD1-212ENST00000554486 SYTL5Q8TDW5 730 aaPredicted RBP7.27□□□□□ -1.25
SCFD1-212ENST00000554486 DCAF4Q8WV16 495 aa7.27□□□□□ -1.25
SCFD1-212ENST00000554486 C12orf42Q96LP6 360 aa7.27□□□□□ -1.25
SCFD1-212ENST00000554486 SH2D4AQ9H788 454 aa7.27□□□□□ -1.25
SCFD1-212ENST00000554486 RC3H2Q9HBD1 1191 aaKnown RBP7.27□□□□□ -1.25
SCFD1-212ENST00000554486 PRR13Q9NZ81 148 aa7.27□□□□□ -1.25
SCFD1-212ENST00000554486 LMCD1Q9NZU5 365 aa7.27□□□□□ -1.25
SCFD1-212ENST00000554486 FBXL21Q9UKT6 434 aa7.27□□□□□ -1.25
SCFD1-212ENST00000554486 SMCHD1A6NHR9 2005 aa7.27□□□□□ -1.25
SCFD1-212ENST00000554486 FRMPD2Q68DX3 1309 aaPredicted RBP7.27□□□□□ -1.25
SCFD1-212ENST00000554486 A0A0G2JLL6 359 aaPredicted RBP7.26□□□□□ -1.25
SCFD1-212ENST00000554486 CCDC85CA6NKD9 419 aa7.26□□□□□ -1.25
SCFD1-212ENST00000554486 KLRF2D3W0D1 207 aa7.26□□□□□ -1.25
SCFD1-212ENST00000554486 WDR46O15213 610 aaKnown RBP7.26□□□□□ -1.25
SCFD1-212ENST00000554486 PDPK1O15530 556 aa7.26□□□□□ -1.25
SCFD1-212ENST00000554486 CYTH3O43739 400 aa7.26□□□□□ -1.25
SCFD1-212ENST00000554486 JAK2O60674 1132 aa7.26□□□□□ -1.25
SCFD1-212ENST00000554486 ESR1P03372 595 aa7.26□□□□□ -1.25
SCFD1-212ENST00000554486 PARP1P09874 1014 aaKnown RBP7.26□□□□□ -1.25
SCFD1-212ENST00000554486 IFNAR1P17181 557 aa7.26□□□□□ -1.25
SCFD1-212ENST00000554486 ITGB5P18084 799 aa7.26□□□□□ -1.25
SCFD1-212ENST00000554486 VCAM1P19320 739 aa7.26□□□□□ -1.25
SCFD1-212ENST00000554486 KIF5BP33176 963 aa7.26□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms