RNA–Protein interactions for RNA: ENST00000554290.1

CPSF2-203, Transcript of cleavage and polyadenylation specific factor 2, humanhuman

TSL 4

Gene CPSF2, Length 558 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2-203ENST00000554290 CPB2Q96IY4 423 aa20.84■□□□□ 0.93
CPSF2-203ENST00000554290 VN1R3Q9BXE9 311 aa20.84■□□□□ 0.93
CPSF2-203ENST00000554290 EIF2AQ9BY44 585 aaKnown RBP20.84■□□□□ 0.93
CPSF2-203ENST00000554290 MRPL17Q9NRX2 175 aaKnown RBP20.84■□□□□ 0.93
CPSF2-203ENST00000554290 CDH22Q9UJ99 828 aa20.84■□□□□ 0.93
CPSF2-203ENST00000554290 LIMCH1Q9UPQ0 1083 aa20.84■□□□□ 0.93
CPSF2-203ENST00000554290 ARL5CA6NH57 179 aa20.83■□□□□ 0.93
CPSF2-203ENST00000554290 POTEMA6NI47 508 aa20.83■□□□□ 0.93
CPSF2-203ENST00000554290 SPDYE4A6NLX3 237 aa20.83■□□□□ 0.93
CPSF2-203ENST00000554290 INPPL1O15357 1258 aa20.83■□□□□ 0.93
CPSF2-203ENST00000554290 SSBP05455 408 aaKnown RBP eCLIP20.83■□□□□ 0.93
CPSF2-203ENST00000554290 KIAA1841Q6NSI8 718 aa20.83■□□□□ 0.93
CPSF2-203ENST00000554290 PRRX2Q99811 253 aa20.83■□□□□ 0.93
CPSF2-203ENST00000554290 TUFT1Q9NNX1 390 aa20.83■□□□□ 0.93
CPSF2-203ENST00000554290 DBR1Q9UK59 544 aaKnown RBP20.83■□□□□ 0.93
CPSF2-203ENST00000554290 SSX2IPQ9Y2D8 614 aa20.83■□□□□ 0.93
CPSF2-203ENST00000554290 MUC6Q6W4X9 2439 aa20.83■□□□□ 0.92
CPSF2-203ENST00000554290 USO1O60763 962 aaKnown RBP20.82■□□□□ 0.92
CPSF2-203ENST00000554290 SOD2P04179 222 aa20.82■□□□□ 0.92
CPSF2-203ENST00000554290 WEE2P0C1S8 567 aa20.82■□□□□ 0.92
CPSF2-203ENST00000554290 ARF4P18085 180 aaPredicted RBP20.82■□□□□ 0.92
CPSF2-203ENST00000554290 GLRA2P23416 452 aa20.82■□□□□ 0.92
CPSF2-203ENST00000554290 MLH1P40692 756 aa20.82■□□□□ 0.92
CPSF2-203ENST00000554290 OR1G1P47890 313 aa20.82■□□□□ 0.92
CPSF2-203ENST00000554290 GUCY1B3Q02153 619 aa20.82■□□□□ 0.92
CPSF2-203ENST00000554290 NHLH1Q02575 133 aa20.82■□□□□ 0.92
CPSF2-203ENST00000554290 AMHR2Q16671 573 aa20.82■□□□□ 0.92
CPSF2-203ENST00000554290 COLGALT2Q8IYK4 626 aa20.82■□□□□ 0.92
CPSF2-203ENST00000554290 PLCD3Q8N3E9 789 aa20.82■□□□□ 0.92
CPSF2-203ENST00000554290 C8orf76Q96K31 380 aa20.82■□□□□ 0.92
CPSF2-203ENST00000554290 KLHL5Q96PQ7 755 aa20.82■□□□□ 0.92
CPSF2-203ENST00000554290 GAD1Q99259 594 aa20.82■□□□□ 0.92
CPSF2-203ENST00000554290 LLPHQ9BRT6 129 aaKnown RBP20.82■□□□□ 0.92
CPSF2-203ENST00000554290 POLR3FQ9H1D9 316 aaPredicted RBP20.82■□□□□ 0.92
CPSF2-203ENST00000554290 TMEM60Q9H2L4 133 aa20.82■□□□□ 0.92
CPSF2-203ENST00000554290 RNF39Q9H2S5 420 aa20.82■□□□□ 0.92
CPSF2-203ENST00000554290 GIT1Q9Y2X7 761 aa20.82■□□□□ 0.92
CPSF2-203ENST00000554290 PRG3Q9Y2Y8 225 aaPredicted RBP20.82■□□□□ 0.92
CPSF2-203ENST00000554290 TECTAO75443 2155 aa20.82■□□□□ 0.92
CPSF2-203ENST00000554290 TRIOO75962 3097 aa20.81■□□□□ 0.92
CPSF2-203ENST00000554290 C2CD4DB7Z1M9 353 aa20.81■□□□□ 0.92
CPSF2-203ENST00000554290 URODP06132 367 aa20.81■□□□□ 0.92
CPSF2-203ENST00000554290 CNPP09543 421 aaKnown RBP20.81■□□□□ 0.92
CPSF2-203ENST00000554290 SPATA31C1P0DKV0 1188 aa20.81■□□□□ 0.92
CPSF2-203ENST00000554290 ORC2Q13416 577 aaPredicted RBP20.81■□□□□ 0.92
CPSF2-203ENST00000554290 KANK3Q6NY19 840 aa20.81■□□□□ 0.92
CPSF2-203ENST00000554290 SLC27A1Q6PCB7 646 aa20.81■□□□□ 0.92
CPSF2-203ENST00000554290 ALYREFQ86V81 257 aaKnown RBP20.81■□□□□ 0.92
CPSF2-203ENST00000554290 UBALD2Q8IYN6 164 aa20.81■□□□□ 0.92
CPSF2-203ENST00000554290 TDRD5Q8NAT2 981 aaKnown RBP20.81■□□□□ 0.92
CPSF2-203ENST00000554290 KREMEN2Q8NCW0 462 aa20.81■□□□□ 0.92
CPSF2-203ENST00000554290 MCPH1Q8NEM0 835 aa20.81■□□□□ 0.92
CPSF2-203ENST00000554290 ERMNQ8TAM6 284 aa20.81■□□□□ 0.92
CPSF2-203ENST00000554290 ASIC4Q96FT7 647 aa20.81■□□□□ 0.92
CPSF2-203ENST00000554290 NACC1Q96RE7 527 aa20.81■□□□□ 0.92
CPSF2-203ENST00000554290 APOL6Q9BWW8 343 aa20.81■□□□□ 0.92
CPSF2-203ENST00000554290 SFXN1Q9H9B4 322 aa20.81■□□□□ 0.92
CPSF2-203ENST00000554290 SORCS3Q9UPU3 1222 aa20.81■□□□□ 0.92
CPSF2-203ENST00000554290 USTQ9Y2C2 406 aa20.81■□□□□ 0.92
CPSF2-203ENST00000554290 HES2Q9Y543 173 aa20.81■□□□□ 0.92
CPSF2-203ENST00000554290 A0A087WWV3 80 aa20.8■□□□□ 0.92
CPSF2-203ENST00000554290 LRRIQ4A6NIV6 560 aa20.8■□□□□ 0.92
CPSF2-203ENST00000554290 LILRB3O75022 631 aa20.8■□□□□ 0.92
CPSF2-203ENST00000554290 SEC24BO95487 1268 aa20.8■□□□□ 0.92
CPSF2-203ENST00000554290 SCNN1GP51170 649 aa20.8■□□□□ 0.92
CPSF2-203ENST00000554290 CLCN4P51793 760 aa20.8■□□□□ 0.92
CPSF2-203ENST00000554290 DSC1Q08554 894 aa20.8■□□□□ 0.92
CPSF2-203ENST00000554290 ST3GAL1Q11201 340 aa20.8■□□□□ 0.92
CPSF2-203ENST00000554290 MTMR3Q13615 1198 aa20.8■□□□□ 0.92
CPSF2-203ENST00000554290 ELMSAN1Q6PJG2 1045 aa20.8■□□□□ 0.92
CPSF2-203ENST00000554290 TMC5Q6UXY8 1006 aa20.8■□□□□ 0.92
CPSF2-203ENST00000554290 MAEAQ7L5Y9 396 aa20.8■□□□□ 0.92
CPSF2-203ENST00000554290 CATSPER3Q86XQ3 398 aa20.8■□□□□ 0.92
CPSF2-203ENST00000554290 CCDC83Q8IWF9 413 aa20.8■□□□□ 0.92
CPSF2-203ENST00000554290 ZFP42Q96MM3 310 aa20.8■□□□□ 0.92
CPSF2-203ENST00000554290 POLR3CQ9BUI4 534 aaPredicted RBP20.8■□□□□ 0.92
CPSF2-203ENST00000554290 COLEC11Q9BWP8 271 aa20.8■□□□□ 0.92
CPSF2-203ENST00000554290 FOXP1Q9H334 677 aaPredicted RBP20.8■□□□□ 0.92
CPSF2-203ENST00000554290 DPP7Q9UHL4 492 aa20.8■□□□□ 0.92
CPSF2-203ENST00000554290 ARID2Q68CP9 1835 aa20.8■□□□□ 0.92
CPSF2-203ENST00000554290 A0A1B0GUA9 196 aa20.79■□□□□ 0.92
CPSF2-203ENST00000554290 C2CD2LO14523 706 aa20.79■□□□□ 0.92
CPSF2-203ENST00000554290 B4GALT5O43286 388 aa20.79■□□□□ 0.92
CPSF2-203ENST00000554290 ADH1AP07327 375 aa20.79■□□□□ 0.92
CPSF2-203ENST00000554290 GPR149Q86SP6 731 aa20.79■□□□□ 0.92
CPSF2-203ENST00000554290 ZBTB8OSQ8IWT0 167 aa20.79■□□□□ 0.92
CPSF2-203ENST00000554290 ZDHHC14Q8IZN3 488 aa20.79■□□□□ 0.92
CPSF2-203ENST00000554290 PRIMPOLQ96LW4 560 aa20.79■□□□□ 0.92
CPSF2-203ENST00000554290 ZSCAN31Q96LW9 406 aaPredicted RBP20.79■□□□□ 0.92
CPSF2-203ENST00000554290 RPS6KC1Q96S38 1066 aa20.79■□□□□ 0.92
CPSF2-203ENST00000554290 HERC2P3Q9BVR0 1158 aa20.79■□□□□ 0.92
CPSF2-203ENST00000554290 NXF3Q9H4D5 531 aaKnown RBP20.79■□□□□ 0.92
CPSF2-203ENST00000554290 PRMT7Q9NVM4 692 aaPredicted RBP20.79■□□□□ 0.92
CPSF2-203ENST00000554290 MARCH5Q9NX47 278 aa20.79■□□□□ 0.92
CPSF2-203ENST00000554290 MIOSQ9NXC5 875 aa20.79■□□□□ 0.92
CPSF2-203ENST00000554290 MED24O75448 989 aa20.78■□□□□ 0.92
CPSF2-203ENST00000554290 NPTXRO95502 500 aa20.78■□□□□ 0.92
CPSF2-203ENST00000554290 OR52Z1P0C646 297 aa20.78■□□□□ 0.92
CPSF2-203ENST00000554290 AKAP5P24588 427 aa20.78■□□□□ 0.92
CPSF2-203ENST00000554290 RPA1P27694 616 aa20.78■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms