RNA–Protein interactions for RNA: ENST00000554180.5

TDP1-209, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 910 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-209ENST00000554180 HSPBP1Q9NZL4 362 aa8.36□□□□□ -1.07
TDP1-209ENST00000554180 TNFSF13BQ9Y275 285 aa8.36□□□□□ -1.07
TDP1-209ENST00000554180 CENPFP49454 3210 aa8.36□□□□□ -1.07
TDP1-209ENST00000554180 GRIN2DO15399 1336 aa8.35□□□□□ -1.07
TDP1-209ENST00000554180 ITIH6Q6UXX5 1313 aa8.35□□□□□ -1.07
TDP1-209ENST00000554180 A0A0B4J269 797 aa8.35□□□□□ -1.07
TDP1-209ENST00000554180 GOLGA6L6A8MZA4 724 aa8.35□□□□□ -1.07
TDP1-209ENST00000554180 TISP43B9A030 160 aa8.35□□□□□ -1.07
TDP1-209ENST00000554180 ANKRD63C9JTQ0 380 aa8.35□□□□□ -1.07
TDP1-209ENST00000554180 M0QZ92 97 aa8.35□□□□□ -1.07
TDP1-209ENST00000554180 CLDN3O15551 220 aa8.35□□□□□ -1.07
TDP1-209ENST00000554180 EXTL3O43909 919 aa8.35□□□□□ -1.07
TDP1-209ENST00000554180 ERLIN2O94905 339 aa8.35□□□□□ -1.07
TDP1-209ENST00000554180 DARSP14868 501 aaKnown RBP8.35□□□□□ -1.07
TDP1-209ENST00000554180 PROZP22891 400 aa8.35□□□□□ -1.07
TDP1-209ENST00000554180 EIF4BP23588 611 aaKnown RBP8.35□□□□□ -1.07
TDP1-209ENST00000554180 DEKP35659 375 aaKnown RBP8.35□□□□□ -1.07
TDP1-209ENST00000554180 CASP4P49662 377 aa8.35□□□□□ -1.07
TDP1-209ENST00000554180 CRYBB1P53674 252 aaPredicted RBP8.35□□□□□ -1.07
TDP1-209ENST00000554180 MRPS6P82932 125 aaKnown RBP8.35□□□□□ -1.07
TDP1-209ENST00000554180 ZNF200P98182 395 aaPredicted RBP8.35□□□□□ -1.07
TDP1-209ENST00000554180 POU5F1Q01860 360 aaKnown RBP8.35□□□□□ -1.07
TDP1-209ENST00000554180 MCL1Q07820 350 aa8.35□□□□□ -1.07
TDP1-209ENST00000554180 NCBP1Q09161 790 aaKnown RBP8.35□□□□□ -1.07
TDP1-209ENST00000554180 SNRNP35Q16560 246 aaKnown RBP8.35□□□□□ -1.07
TDP1-209ENST00000554180 PTGISQ16647 500 aa8.35□□□□□ -1.07
TDP1-209ENST00000554180 AMHR2Q16671 573 aa8.35□□□□□ -1.07
TDP1-209ENST00000554180 KYAT1Q16773 422 aa8.35□□□□□ -1.07
TDP1-209ENST00000554180 KIZQ2M2Z5 673 aa8.35□□□□□ -1.07
TDP1-209ENST00000554180 VWA3BQ502W6 1294 aa8.35□□□□□ -1.07
TDP1-209ENST00000554180 MIIPQ5JXC2 388 aa8.35□□□□□ -1.07
TDP1-209ENST00000554180 FKBP15Q5T1M5 1219 aa8.35□□□□□ -1.07
TDP1-209ENST00000554180 ATF7IP2Q5U623 682 aa8.35□□□□□ -1.07
TDP1-209ENST00000554180 SPECC1LQ69YQ0 1117 aa8.35□□□□□ -1.07
TDP1-209ENST00000554180 MPZL3Q6UWV2 235 aa8.35□□□□□ -1.07
TDP1-209ENST00000554180 APBB1IPQ7Z5R6 666 aaPredicted RBP8.35□□□□□ -1.07
TDP1-209ENST00000554180 VSTM4Q8IW00 320 aa8.35□□□□□ -1.07
TDP1-209ENST00000554180 GPD1LQ8N335 351 aa8.35□□□□□ -1.07
TDP1-209ENST00000554180 DNAJB3Q8WWF6 145 aa8.35□□□□□ -1.07
TDP1-209ENST00000554180 VTI1AQ96AJ9 217 aa8.35□□□□□ -1.07
TDP1-209ENST00000554180 IQCDQ96DY2 449 aa8.35□□□□□ -1.07
TDP1-209ENST00000554180 EEF2KMTQ96G04 330 aa8.35□□□□□ -1.07
TDP1-209ENST00000554180 NAP1L5Q96NT1 182 aaPredicted RBP8.35□□□□□ -1.07
TDP1-209ENST00000554180 ACO2Q99798 780 aaKnown RBP8.35□□□□□ -1.07
TDP1-209ENST00000554180 TARS2Q9BW92 718 aaKnown RBP8.35□□□□□ -1.07
TDP1-209ENST00000554180 IKZF4Q9H2S9 585 aa8.35□□□□□ -1.07
TDP1-209ENST00000554180 NDST4Q9H3R1 872 aa8.35□□□□□ -1.07
TDP1-209ENST00000554180 MINDY3Q9H8M7 445 aa8.35□□□□□ -1.07
TDP1-209ENST00000554180 PTPRHQ9HD43 1115 aa8.35□□□□□ -1.07
TDP1-209ENST00000554180 INTS13Q9NVM9 706 aa8.35□□□□□ -1.07
TDP1-209ENST00000554180 TAB2Q9NYJ8 693 aa8.35□□□□□ -1.07
TDP1-209ENST00000554180 IMPACTQ9P2X3 320 aa8.35□□□□□ -1.07
TDP1-209ENST00000554180 UTP18Q9Y5J1 556 aaKnown RBP eCLIP8.35□□□□□ -1.07
TDP1-209ENST00000554180 KAT6AQ92794 2004 aa8.35□□□□□ -1.07
TDP1-209ENST00000554180 FRMPD3Q5JV73 1810 aa8.35□□□□□ -1.07
TDP1-209ENST00000554180 MROH7Q68CQ1 1323 aa8.34□□□□□ -1.07
TDP1-209ENST00000554180 A0A1B0GUA9 196 aa8.34□□□□□ -1.07
TDP1-209ENST00000554180 GTPBP10A4D1E9 387 aaKnown RBP8.34□□□□□ -1.07
TDP1-209ENST00000554180 ARVCFO00192 962 aa8.34□□□□□ -1.07
TDP1-209ENST00000554180 ABLIM1O14639 778 aa8.34□□□□□ -1.07
TDP1-209ENST00000554180 STX10O60499 249 aa8.34□□□□□ -1.07
TDP1-209ENST00000554180 EDN1P05305 212 aa8.34□□□□□ -1.07
TDP1-209ENST00000554180 IQCF3P0C7M6 154 aa8.34□□□□□ -1.07
TDP1-209ENST00000554180 KRT13P13646 458 aa8.34□□□□□ -1.07
TDP1-209ENST00000554180 AXLP30530 894 aa8.34□□□□□ -1.07
TDP1-209ENST00000554180 PBX1P40424 430 aa8.34□□□□□ -1.07
TDP1-209ENST00000554180 UBXN1Q04323 297 aa8.34□□□□□ -1.07
TDP1-209ENST00000554180 RBL2Q08999 1139 aa8.34□□□□□ -1.07
TDP1-209ENST00000554180 BFSP1Q12934 665 aa8.34□□□□□ -1.07
TDP1-209ENST00000554180 TRIM14Q14142 442 aa8.34□□□□□ -1.07
TDP1-209ENST00000554180 NOLC1Q14978 699 aaKnown RBP eCLIP8.34□□□□□ -1.07
TDP1-209ENST00000554180 SNX17Q15036 470 aa8.34□□□□□ -1.07
TDP1-209ENST00000554180 TMEM132AQ24JP5 1023 aa8.34□□□□□ -1.07
TDP1-209ENST00000554180 FAM43BQ6ZT52 329 aaPredicted RBP8.34□□□□□ -1.07
TDP1-209ENST00000554180 CREBRFQ8IUR6 639 aa8.34□□□□□ -1.07
TDP1-209ENST00000554180 ANKLE1Q8NAG6 615 aa8.34□□□□□ -1.07
TDP1-209ENST00000554180 TMC2Q8TDI7 906 aa8.34□□□□□ -1.07
TDP1-209ENST00000554180 U2AF1L4Q8WU68 220 aaKnown RBP8.34□□□□□ -1.07
TDP1-209ENST00000554180 SLC35C1Q96A29 364 aa8.34□□□□□ -1.07
TDP1-209ENST00000554180 CCDC51Q96ER9 411 aa8.34□□□□□ -1.07
TDP1-209ENST00000554180 ERGIC2Q96RQ1 377 aa8.34□□□□□ -1.07
TDP1-209ENST00000554180 MSTO1Q9BUK6 570 aa8.34□□□□□ -1.07
TDP1-209ENST00000554180 CELF4Q9BZC1 486 aaKnown RBP8.34□□□□□ -1.07
TDP1-209ENST00000554180 SENP6Q9GZR1 1112 aaPredicted RBP8.34□□□□□ -1.07
TDP1-209ENST00000554180 VPS16Q9H269 839 aa8.34□□□□□ -1.07
TDP1-209ENST00000554180 PRDM10Q9NQV6 1147 aa8.34□□□□□ -1.07
TDP1-209ENST00000554180 ANKFY1Q9P2R3 1169 aa8.34□□□□□ -1.07
TDP1-209ENST00000554180 AGO2Q9UKV8 859 aaKnown RBP8.34□□□□□ -1.07
TDP1-209ENST00000554180 NOD1Q9Y239 953 aa8.34□□□□□ -1.07
TDP1-209ENST00000554180 TRPV2Q9Y5S1 764 aa8.34□□□□□ -1.07
TDP1-209ENST00000554180 SQORQ9Y6N5 450 aa8.34□□□□□ -1.07
TDP1-209ENST00000554180 ZNF233A6NK53 670 aa8.33□□□□□ -1.08
TDP1-209ENST00000554180 PES1O00541 588 aaKnown RBP8.33□□□□□ -1.08
TDP1-209ENST00000554180 OGTO15294 1046 aa8.33□□□□□ -1.08
TDP1-209ENST00000554180 PMM2O15305 246 aa8.33□□□□□ -1.08
TDP1-209ENST00000554180 P4HA2O15460 535 aa8.33□□□□□ -1.08
TDP1-209ENST00000554180 B4GALT5O43286 388 aa8.33□□□□□ -1.08
TDP1-209ENST00000554180 FAM189A1O60320 539 aa8.33□□□□□ -1.08
TDP1-209ENST00000554180 TSPAN1O60635 241 aa8.33□□□□□ -1.08
TDP1-209ENST00000554180 N4BP1O75113 896 aaKnown RBP8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms