RNA–Protein interactions for RNA: ENST00000554005.1

FOXN3-206, Transcript of forkhead box N3, humanhuman

TSL 5

Gene FOXN3, Length 450 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-206ENST00000554005 ATP2C1P98194 919 aaPredicted RBP6.73□□□□□ -1.33
FOXN3-206ENST00000554005 U2AF1Q01081 240 aaKnown RBP eCLIP6.73□□□□□ -1.33
FOXN3-206ENST00000554005 GTF2H3Q13889 308 aa6.73□□□□□ -1.33
FOXN3-206ENST00000554005 SEPT2Q15019 361 aa6.73□□□□□ -1.33
FOXN3-206ENST00000554005 ACAP1Q15027 740 aa6.73□□□□□ -1.33
FOXN3-206ENST00000554005 MST1LQ2TV78 715 aa6.73□□□□□ -1.33
FOXN3-206ENST00000554005 C3orf36Q3SXR2 165 aa6.73□□□□□ -1.33
FOXN3-206ENST00000554005 IFIT1BQ5T764 474 aaKnown RBP6.73□□□□□ -1.33
FOXN3-206ENST00000554005 CCDC181Q5TID7 509 aa6.73□□□□□ -1.33
FOXN3-206ENST00000554005 LILRA6Q6PI73 481 aa6.73□□□□□ -1.33
FOXN3-206ENST00000554005 SP8Q8IXZ3 490 aa6.73□□□□□ -1.33
FOXN3-206ENST00000554005 ZDHHC14Q8IZN3 488 aa6.73□□□□□ -1.33
FOXN3-206ENST00000554005 SYT8Q8NBV8 401 aa6.73□□□□□ -1.33
FOXN3-206ENST00000554005 CLIP3Q96DZ5 547 aa6.73□□□□□ -1.33
FOXN3-206ENST00000554005 GTPBP4Q9BZE4 634 aaKnown RBP6.73□□□□□ -1.33
FOXN3-206ENST00000554005 JADE2Q9NQC1 790 aa6.73□□□□□ -1.33
FOXN3-206ENST00000554005 TLR9Q9NR96 1032 aa6.73□□□□□ -1.33
FOXN3-206ENST00000554005 ING3Q9NXR8 418 aa6.73□□□□□ -1.33
FOXN3-206ENST00000554005 INTUQ9ULD6 942 aa6.73□□□□□ -1.33
FOXN3-206ENST00000554005 NR2E1Q9Y466 385 aa6.73□□□□□ -1.33
FOXN3-206ENST00000554005 FAM171A2A8MVW0 826 aa6.72□□□□□ -1.33
FOXN3-206ENST00000554005 MTSS1O43312 755 aa6.72□□□□□ -1.33
FOXN3-206ENST00000554005 B4GALT4O60513 344 aa6.72□□□□□ -1.33
FOXN3-206ENST00000554005 PHF2O75151 1096 aa6.72□□□□□ -1.33
FOXN3-206ENST00000554005 CNOT4O95628 575 aaKnown RBP6.72□□□□□ -1.33
FOXN3-206ENST00000554005 ADSLP30566 484 aaPredicted RBP6.72□□□□□ -1.33
FOXN3-206ENST00000554005 FXR1P51114 621 aaKnown RBP eCLIP6.72□□□□□ -1.33
FOXN3-206ENST00000554005 WNT3AP56704 352 aa6.72□□□□□ -1.33
FOXN3-206ENST00000554005 BPIFB4P59827 614 aa6.72□□□□□ -1.33
FOXN3-206ENST00000554005 ADAM8P78325 824 aa6.72□□□□□ -1.33
FOXN3-206ENST00000554005 ZNF568Q3ZCX4 644 aa6.72□□□□□ -1.33
FOXN3-206ENST00000554005 BORAQ6PGQ7 559 aa6.72□□□□□ -1.33
FOXN3-206ENST00000554005 Q6ZVL8 140 aa6.72□□□□□ -1.33
FOXN3-206ENST00000554005 USP45Q70EL2 814 aa6.72□□□□□ -1.33
FOXN3-206ENST00000554005 ZNF480Q8WV37 535 aa6.72□□□□□ -1.33
FOXN3-206ENST00000554005 CFHR4Q92496 578 aa6.72□□□□□ -1.33
FOXN3-206ENST00000554005 SLC6A15Q9H2J7 730 aa6.72□□□□□ -1.33
FOXN3-206ENST00000554005 NMRK2Q9NPI5 230 aa6.72□□□□□ -1.33
FOXN3-206ENST00000554005 FANCD2Q9BXW9 1451 aa6.72□□□□□ -1.33
FOXN3-206ENST00000554005 MATN2O00339 956 aa6.71□□□□□ -1.34
FOXN3-206ENST00000554005 AP1G1O43747 822 aa6.71□□□□□ -1.34
FOXN3-206ENST00000554005 OFD1O75665 1012 aa6.71□□□□□ -1.34
FOXN3-206ENST00000554005 VSIG10L2P0DP72 767 aa6.71□□□□□ -1.34
FOXN3-206ENST00000554005 HSPA6P17066 643 aa6.71□□□□□ -1.34
FOXN3-206ENST00000554005 PDCP20941 246 aa6.71□□□□□ -1.34
FOXN3-206ENST00000554005 ECHS1P30084 290 aa6.71□□□□□ -1.34
FOXN3-206ENST00000554005 ZNF267Q14586 743 aaPredicted RBP6.71□□□□□ -1.34
FOXN3-206ENST00000554005 GAGE13Q4V321 117 aa6.71□□□□□ -1.34
FOXN3-206ENST00000554005 GJC2Q5T442 439 aaPredicted RBP6.71□□□□□ -1.34
FOXN3-206ENST00000554005 FAM180AQ6UWF9 173 aa6.71□□□□□ -1.34
FOXN3-206ENST00000554005 B3GNT9Q6UX72 402 aa6.71□□□□□ -1.34
FOXN3-206ENST00000554005 PRR18Q8N4B5 295 aa6.71□□□□□ -1.34
FOXN3-206ENST00000554005 LILRA3Q8N6C8 439 aaPredicted RBP6.71□□□□□ -1.34
FOXN3-206ENST00000554005 ANKRD53Q8N9V6 530 aa6.71□□□□□ -1.34
FOXN3-206ENST00000554005 ZSCAN18Q8TBC5 510 aaPredicted RBP6.71□□□□□ -1.34
FOXN3-206ENST00000554005 HPS3Q969F9 1004 aa6.71□□□□□ -1.34
FOXN3-206ENST00000554005 HDAC10Q969S8 669 aa6.71□□□□□ -1.34
FOXN3-206ENST00000554005 RELTQ969Z4 430 aa6.71□□□□□ -1.34
FOXN3-206ENST00000554005 GOLGA6CA6NDK9 693 aa6.7□□□□□ -1.34
FOXN3-206ENST00000554005 GOLGA6BA6NDN3 693 aa6.7□□□□□ -1.34
FOXN3-206ENST00000554005 ENDOD1O94919 500 aa6.7□□□□□ -1.34
FOXN3-206ENST00000554005 JUNP05412 331 aaKnown RBP6.7□□□□□ -1.34
FOXN3-206ENST00000554005 GOLGA6DP0CG33 693 aa6.7□□□□□ -1.34
FOXN3-206ENST00000554005 SLC6A9P48067 706 aa6.7□□□□□ -1.34
FOXN3-206ENST00000554005 IL10RAQ13651 578 aa6.7□□□□□ -1.34
FOXN3-206ENST00000554005 GFOD2Q3B7J2 385 aa6.7□□□□□ -1.34
FOXN3-206ENST00000554005 MINDY4Q4G0A6 757 aa6.7□□□□□ -1.34
FOXN3-206ENST00000554005 ATAT1Q5SQI0 421 aa6.7□□□□□ -1.34
FOXN3-206ENST00000554005 MIGA2Q7L4E1 593 aa6.7□□□□□ -1.34
FOXN3-206ENST00000554005 LGI4Q8N135 537 aa6.7□□□□□ -1.34
FOXN3-206ENST00000554005 MARCH10Q8NA82 808 aaPredicted RBP6.7□□□□□ -1.34
FOXN3-206ENST00000554005 DDX55Q8NHQ9 600 aaKnown RBP eCLIP6.7□□□□□ -1.34
FOXN3-206ENST00000554005 KAT5Q92993 513 aa6.7□□□□□ -1.34
FOXN3-206ENST00000554005 RUNDC1Q96C34 613 aa6.7□□□□□ -1.34
FOXN3-206ENST00000554005 RPL10LQ96L21 214 aaKnown RBP6.7□□□□□ -1.34
FOXN3-206ENST00000554005 GPHA2Q96T91 129 aa6.7□□□□□ -1.34
FOXN3-206ENST00000554005 C7orf25Q9BPX7 421 aa6.7□□□□□ -1.34
FOXN3-206ENST00000554005 USP40Q9NVE5 1235 aa6.7□□□□□ -1.34
FOXN3-206ENST00000554005 GOLGA6AQ9NYA3 693 aa6.7□□□□□ -1.34
FOXN3-206ENST00000554005 TRPS1Q9UHF7 1281 aa6.7□□□□□ -1.34
FOXN3-206ENST00000554005 SIK3Q9Y2K2 1263 aa6.7□□□□□ -1.34
FOXN3-206ENST00000554005 VSTM5A8MXK1 200 aa6.69□□□□□ -1.34
FOXN3-206ENST00000554005 ADCY6O43306 1168 aa6.69□□□□□ -1.34
FOXN3-206ENST00000554005 SLC26A4O43511 780 aa6.69□□□□□ -1.34
FOXN3-206ENST00000554005 DTNBO60941 627 aa6.69□□□□□ -1.34
FOXN3-206ENST00000554005 ZSCAN22P10073 491 aaPredicted RBP6.69□□□□□ -1.34
FOXN3-206ENST00000554005 SAFB2Q14151 953 aaKnown RBP eCLIP6.69□□□□□ -1.34
FOXN3-206ENST00000554005 KRT40Q6A162 431 aa6.69□□□□□ -1.34
FOXN3-206ENST00000554005 NOL8Q76FK4 1167 aaKnown RBP6.69□□□□□ -1.34
FOXN3-206ENST00000554005 PLEKHH3Q7Z736 793 aa6.69□□□□□ -1.34
FOXN3-206ENST00000554005 SLC35G2Q8TBE7 412 aa6.69□□□□□ -1.34
FOXN3-206ENST00000554005 RABGGTAQ92696 567 aa6.69□□□□□ -1.34
FOXN3-206ENST00000554005 MVB12AQ96EY5 273 aa6.69□□□□□ -1.34
FOXN3-206ENST00000554005 TAAR9Q96RI9 348 aa6.69□□□□□ -1.34
FOXN3-206ENST00000554005 MAP3K14Q99558 947 aa6.69□□□□□ -1.34
FOXN3-206ENST00000554005 BCO1Q9HAY6 547 aa6.69□□□□□ -1.34
FOXN3-206ENST00000554005 GPRC5DQ9NZD1 345 aa6.69□□□□□ -1.34
FOXN3-206ENST00000554005 PUF60Q9UHX1 559 aaKnown RBP6.69□□□□□ -1.34
FOXN3-206ENST00000554005 PCDHA13Q9Y5I0 950 aa6.69□□□□□ -1.34
FOXN3-206ENST00000554005 KIF3BO15066 747 aa6.68□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms