RNA–Protein interactions for RNA: ENST00000553612.5

GTF2A1-203, Transcript of general transcription factor IIA subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF2A1, Length 6,306 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1-203ENST00000553612 PPARGP37231 505 aaPredicted RBP9.54□□□□□ -0.88
GTF2A1-203ENST00000553612 IREB2P48200 963 aaKnown RBP9.54□□□□□ -0.88
GTF2A1-203ENST00000553612 GSSP48637 474 aa9.54□□□□□ -0.88
GTF2A1-203ENST00000553612 OLR1P78380 273 aa9.54□□□□□ -0.88
GTF2A1-203ENST00000553612 C11orf96Q7Z7L8 435 aa9.54□□□□□ -0.88
GTF2A1-203ENST00000553612 AIFM3Q96NN9 605 aa9.54□□□□□ -0.88
GTF2A1-203ENST00000553612 DACH2Q96NX9 599 aa9.54□□□□□ -0.88
GTF2A1-203ENST00000553612 RGS12O14924 1447 aa9.54□□□□□ -0.88
GTF2A1-203ENST00000553612 F8W810 466 aa9.54□□□□□ -0.88
GTF2A1-203ENST00000553612 SHOX2O60902 331 aaPredicted RBP9.54□□□□□ -0.88
GTF2A1-203ENST00000553612 DEAF1O75398 565 aaPredicted RBP9.54□□□□□ -0.88
GTF2A1-203ENST00000553612 EIF4A3P38919 411 aaKnown RBP9.54□□□□□ -0.88
GTF2A1-203ENST00000553612 CCT3P49368 545 aaKnown RBP9.54□□□□□ -0.88
GTF2A1-203ENST00000553612 CENPCQ03188 943 aa9.54□□□□□ -0.88
GTF2A1-203ENST00000553612 KDSRQ06136 332 aa9.54□□□□□ -0.88
GTF2A1-203ENST00000553612 ITIH4Q14624 930 aa9.54□□□□□ -0.88
GTF2A1-203ENST00000553612 SGO2Q562F6 1265 aa9.54□□□□□ -0.88
GTF2A1-203ENST00000553612 RAD9BQ6WBX8 426 aa9.54□□□□□ -0.88
GTF2A1-203ENST00000553612 NECAB2Q7Z6G3 386 aa9.54□□□□□ -0.88
GTF2A1-203ENST00000553612 WASF1Q92558 559 aa9.54□□□□□ -0.88
GTF2A1-203ENST00000553612 PPCSQ9HAB8 311 aa9.54□□□□□ -0.88
GTF2A1-203ENST00000553612 RPRD1BQ9NQG5 326 aaKnown RBP9.54□□□□□ -0.88
GTF2A1-203ENST00000553612 SACM1LQ9NTJ5 587 aa9.54□□□□□ -0.88
GTF2A1-203ENST00000553612 SNX13Q9Y5W8 968 aa9.54□□□□□ -0.88
GTF2A1-203ENST00000553612 HNF1BP35680 557 aa9.53□□□□□ -0.88
GTF2A1-203ENST00000553612 AP1B1Q10567 949 aa9.53□□□□□ -0.88
GTF2A1-203ENST00000553612 CSTF3Q12996 717 aaKnown RBP9.53□□□□□ -0.88
GTF2A1-203ENST00000553612 HELQQ8TDG4 1101 aa9.53□□□□□ -0.88
GTF2A1-203ENST00000553612 WNK4Q96J92 1243 aa9.53□□□□□ -0.88
GTF2A1-203ENST00000553612 ZMYND12Q9H0C1 365 aa9.53□□□□□ -0.88
GTF2A1-203ENST00000553612 TRPV6Q9H1D0 765 aa9.53□□□□□ -0.88
GTF2A1-203ENST00000553612 BAZ1AQ9NRL2 1556 aaPredicted RBP9.53□□□□□ -0.88
GTF2A1-203ENST00000553612 TMEM221A6NGB7 291 aa9.53□□□□□ -0.88
GTF2A1-203ENST00000553612 IL1R1P14778 569 aa9.53□□□□□ -0.88
GTF2A1-203ENST00000553612 SLC1A1P43005 524 aa9.53□□□□□ -0.88
GTF2A1-203ENST00000553612 CTDSPL2Q05D32 466 aa9.53□□□□□ -0.88
GTF2A1-203ENST00000553612 SLC34A1Q06495 639 aa9.53□□□□□ -0.88
GTF2A1-203ENST00000553612 NXNQ6DKJ4 435 aa9.53□□□□□ -0.88
GTF2A1-203ENST00000553612 DGLUCYQ7Z3D6 616 aa9.53□□□□□ -0.88
GTF2A1-203ENST00000553612 MXD3Q9BW11 206 aa9.53□□□□□ -0.88
GTF2A1-203ENST00000553612 EPS15L1Q9UBC2 864 aa9.53□□□□□ -0.88
GTF2A1-203ENST00000553612 NKX1-2Q9UD57 310 aaPredicted RBP9.53□□□□□ -0.88
GTF2A1-203ENST00000553612 FOXN1O15353 648 aa9.53□□□□□ -0.88
GTF2A1-203ENST00000553612 LYNP07948 512 aa9.53□□□□□ -0.88
GTF2A1-203ENST00000553612 CD97P48960 835 aa9.53□□□□□ -0.88
GTF2A1-203ENST00000553612 STX1BP61266 288 aa9.53□□□□□ -0.88
GTF2A1-203ENST00000553612 SLC9C1Q4G0N8 1177 aa9.53□□□□□ -0.88
GTF2A1-203ENST00000553612 C12orf50Q8NA57 414 aaPredicted RBP9.53□□□□□ -0.88
GTF2A1-203ENST00000553612 SPATA4Q8NEY3 305 aa9.53□□□□□ -0.88
GTF2A1-203ENST00000553612 SP140LQ9H930 580 aa9.53□□□□□ -0.88
GTF2A1-203ENST00000553612 BMP2KQ9NSY1 1161 aaPredicted RBP9.53□□□□□ -0.88
GTF2A1-203ENST00000553612 CABP1Q9NZU7 370 aa9.53□□□□□ -0.88
GTF2A1-203ENST00000553612 ZMYND8Q9ULU4 1186 aaPredicted RBP9.53□□□□□ -0.88
GTF2A1-203ENST00000553612 A0A1W2PQ67 120 aa9.53□□□□□ -0.88
GTF2A1-203ENST00000553612 A8MU76 341 aa9.53□□□□□ -0.88
GTF2A1-203ENST00000553612 ALDH1B1P30837 517 aa9.53□□□□□ -0.88
GTF2A1-203ENST00000553612 PDE4DQ08499 809 aa9.53□□□□□ -0.88
GTF2A1-203ENST00000553612 CCDC14Q49A88 953 aa9.53□□□□□ -0.88
GTF2A1-203ENST00000553612 TMTC3Q6ZXV5 915 aa9.53□□□□□ -0.88
GTF2A1-203ENST00000553612 BPHLQ86WA6 291 aaPredicted RBP9.53□□□□□ -0.88
GTF2A1-203ENST00000553612 LRRC49Q8IUZ0 686 aa9.53□□□□□ -0.88
GTF2A1-203ENST00000553612 SRRM1Q8IYB3 904 aaKnown RBP9.53□□□□□ -0.88
GTF2A1-203ENST00000553612 PJA1Q8NG27 643 aa9.53□□□□□ -0.88
GTF2A1-203ENST00000553612 AKAP1Q92667 903 aaKnown RBP eCLIP9.53□□□□□ -0.88
GTF2A1-203ENST00000553612 THTPAQ9BU02 230 aa9.53□□□□□ -0.88
GTF2A1-203ENST00000553612 HEMGNQ9BXL5 484 aa9.53□□□□□ -0.88
GTF2A1-203ENST00000553612 PPIP5K1Q6PFW1 1433 aa9.53□□□□□ -0.88
GTF2A1-203ENST00000553612 FAM196BA6NMK8 535 aa9.53□□□□□ -0.88
GTF2A1-203ENST00000553612 ABLIM1O14639 778 aa9.53□□□□□ -0.88
GTF2A1-203ENST00000553612 SPOPO43791 374 aa9.53□□□□□ -0.88
GTF2A1-203ENST00000553612 VAMP4O75379 141 aa9.53□□□□□ -0.88
GTF2A1-203ENST00000553612 PTPN5P54829 565 aa9.53□□□□□ -0.88
GTF2A1-203ENST00000553612 LUZP2Q86TE4 346 aa9.53□□□□□ -0.88
GTF2A1-203ENST00000553612 OTUD5Q96G74 571 aa9.53□□□□□ -0.88
GTF2A1-203ENST00000553612 L3MBTL3Q96JM7 780 aaPredicted RBP9.53□□□□□ -0.88
GTF2A1-203ENST00000553612 INPP4AQ96PE3 977 aaPredicted RBP9.53□□□□□ -0.88
GTF2A1-203ENST00000553612 FAM153AQ9UHL3 310 aa9.53□□□□□ -0.88
GTF2A1-203ENST00000553612 ATXN2Q99700 1313 aaKnown RBP9.53□□□□□ -0.88
GTF2A1-203ENST00000553612 TTC34A8MYJ7 566 aa9.52□□□□□ -0.88
GTF2A1-203ENST00000553612 H7C1W4 665 aa9.52□□□□□ -0.88
GTF2A1-203ENST00000553612 ENO1P06733 434 aaKnown RBP9.52□□□□□ -0.88
GTF2A1-203ENST00000553612 CUL1Q13616 776 aa9.52□□□□□ -0.88
GTF2A1-203ENST00000553612 SEMA3AQ14563 771 aa9.52□□□□□ -0.88
GTF2A1-203ENST00000553612 FASTKD5Q7L8L6 764 aaKnown RBP9.52□□□□□ -0.88
GTF2A1-203ENST00000553612 TREML1Q86YW5 311 aa9.52□□□□□ -0.88
GTF2A1-203ENST00000553612 LSM14AQ8ND56 463 aaKnown RBP9.52□□□□□ -0.88
GTF2A1-203ENST00000553612 ARHGEF26Q96DR7 871 aa9.52□□□□□ -0.88
GTF2A1-203ENST00000553612 PUS3Q9BZE2 481 aaKnown RBP9.52□□□□□ -0.88
GTF2A1-203ENST00000553612 TMEM5Q9Y2B1 443 aa9.52□□□□□ -0.88
GTF2A1-203ENST00000553612 GRIN2DO15399 1336 aa9.52□□□□□ -0.88
GTF2A1-203ENST00000553612 RGS5O15539 181 aa9.52□□□□□ -0.89
GTF2A1-203ENST00000553612 TRAPPC3O43617 180 aa9.52□□□□□ -0.89
GTF2A1-203ENST00000553612 ZBED1O96006 694 aa9.52□□□□□ -0.89
GTF2A1-203ENST00000553612 CALM1P0DP23 149 aa9.52□□□□□ -0.89
GTF2A1-203ENST00000553612 CALM2P0DP24 149 aa9.52□□□□□ -0.89
GTF2A1-203ENST00000553612 CALM3P0DP25 149 aa9.52□□□□□ -0.89
GTF2A1-203ENST00000553612 PPP2R5DQ14738 602 aa9.52□□□□□ -0.89
GTF2A1-203ENST00000553612 SMAD1Q15797 465 aaKnown RBP9.52□□□□□ -0.89
GTF2A1-203ENST00000553612 DYMQ7RTS9 669 aa9.52□□□□□ -0.89
GTF2A1-203ENST00000553612 PALM2Q8IXS6 379 aa9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms