RNA–Protein interactions for RNA: ENST00000553128.5

VPS29-211, Transcript of VPS29, retromer complex component, humanhuman

TSL 3

Gene VPS29, Length 449 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-211ENST00000553128 TCEANC2Q96MN5 208 aa14.53□□□□□ -0.08
VPS29-211ENST00000553128 RTKNQ9BST9 563 aa14.53□□□□□ -0.08
VPS29-211ENST00000553128 BCO2Q9BYV7 579 aa14.53□□□□□ -0.08
VPS29-211ENST00000553128 PRKD2Q9BZL6 878 aa14.53□□□□□ -0.08
VPS29-211ENST00000553128 MINDY3Q9H8M7 445 aa14.53□□□□□ -0.08
VPS29-211ENST00000553128 IFT122Q9HBG6 1241 aa14.53□□□□□ -0.08
VPS29-211ENST00000553128 AGPAT5Q9NUQ2 364 aa14.53□□□□□ -0.08
VPS29-211ENST00000553128 MIOSQ9NXC5 875 aa14.53□□□□□ -0.08
VPS29-211ENST00000553128 MIA3Q5JRA6 1907 aa14.53□□□□□ -0.08
VPS29-211ENST00000553128 ASPMQ8IZT6 3477 aa14.52□□□□□ -0.08
VPS29-211ENST00000553128 hCG_1984214I3L0E3 225 aa14.52□□□□□ -0.09
VPS29-211ENST00000553128 CDC27P30260 824 aa14.52□□□□□ -0.09
VPS29-211ENST00000553128 HOXA11P31270 313 aaPredicted RBP14.52□□□□□ -0.09
VPS29-211ENST00000553128 SLC44A4Q53GD3 710 aa14.52□□□□□ -0.09
VPS29-211ENST00000553128 LILRA6Q6PI73 481 aa14.52□□□□□ -0.09
VPS29-211ENST00000553128 ZNF410Q86VK4 478 aa14.52□□□□□ -0.09
VPS29-211ENST00000553128 GPR161Q8N6U8 529 aaKnown RBP14.52□□□□□ -0.09
VPS29-211ENST00000553128 ZNF713Q8N859 430 aaPredicted RBP14.52□□□□□ -0.09
VPS29-211ENST00000553128 SMG8Q8ND04 991 aaKnown RBP14.52□□□□□ -0.09
VPS29-211ENST00000553128 PHKBQ93100 1093 aa14.52□□□□□ -0.09
VPS29-211ENST00000553128 SHDQ96IW2 340 aa14.52□□□□□ -0.09
VPS29-211ENST00000553128 NIFKQ9BYG3 293 aaKnown RBP14.52□□□□□ -0.09
VPS29-211ENST00000553128 LSG1Q9H089 658 aaKnown RBP14.52□□□□□ -0.09
VPS29-211ENST00000553128 GLT8D2Q9H1C3 349 aa14.52□□□□□ -0.09
VPS29-211ENST00000553128 RNF39Q9H2S5 420 aa14.52□□□□□ -0.09
VPS29-211ENST00000553128 LTB4R2Q9NPC1 389 aa14.52□□□□□ -0.09
VPS29-211ENST00000553128 CHST7Q9NS84 486 aa14.52□□□□□ -0.09
VPS29-211ENST00000553128 RBM28Q9NW13 759 aaKnown RBP14.52□□□□□ -0.09
VPS29-211ENST00000553128 ZSCAN32Q9NX65 697 aa14.52□□□□□ -0.09
VPS29-211ENST00000553128 ZDHHC7Q9NXF8 308 aa14.52□□□□□ -0.09
VPS29-211ENST00000553128 DOCK6Q96HP0 2047 aa14.52□□□□□ -0.09
VPS29-211ENST00000553128 MYH15Q9Y2K3 1946 aa14.52□□□□□ -0.09
VPS29-211ENST00000553128 FRYQ5TBA9 3013 aa14.52□□□□□ -0.09
VPS29-211ENST00000553128 FSHRP23945 695 aa14.51□□□□□ -0.09
VPS29-211ENST00000553128 CIITAP33076 1130 aa14.51□□□□□ -0.09
VPS29-211ENST00000553128 CDC42EP1Q00587 391 aa14.51□□□□□ -0.09
VPS29-211ENST00000553128 GRASPQ7Z6J2 395 aaPredicted RBP14.51□□□□□ -0.09
VPS29-211ENST00000553128 HDAC7Q8WUI4 952 aa14.51□□□□□ -0.09
VPS29-211ENST00000553128 GPR62Q9BZJ7 368 aa14.51□□□□□ -0.09
VPS29-211ENST00000553128 INO80BQ9C086 356 aaPredicted RBP14.51□□□□□ -0.09
VPS29-211ENST00000553128 PLEKHA4Q9H4M7 779 aa14.51□□□□□ -0.09
VPS29-211ENST00000553128 KANSL3Q9P2N6 904 aa14.51□□□□□ -0.09
VPS29-211ENST00000553128 DPP7Q9UHL4 492 aa14.51□□□□□ -0.09
VPS29-211ENST00000553128 SSX2IPQ9Y2D8 614 aa14.51□□□□□ -0.09
VPS29-211ENST00000553128 DYNC1LI1Q9Y6G9 523 aaKnown RBP14.51□□□□□ -0.09
VPS29-211ENST00000553128 CNTNAP2Q9UHC6 1331 aa14.5□□□□□ -0.09
VPS29-211ENST00000553128 MAFO75444 373 aaPredicted RBP14.5□□□□□ -0.09
VPS29-211ENST00000553128 TARSP26639 723 aaKnown RBP14.5□□□□□ -0.09
VPS29-211ENST00000553128 DNM2P50570 870 aa14.5□□□□□ -0.09
VPS29-211ENST00000553128 PRKCQQ04759 706 aa14.5□□□□□ -0.09
VPS29-211ENST00000553128 DSC1Q08554 894 aa14.5□□□□□ -0.09
VPS29-211ENST00000553128 LPAL2Q16609 132 aa14.5□□□□□ -0.09
VPS29-211ENST00000553128 PFKFB3Q16875 520 aaPredicted RBP14.5□□□□□ -0.09
VPS29-211ENST00000553128 PPM1JQ5JR12 505 aa14.5□□□□□ -0.09
VPS29-211ENST00000553128 CREB3L3Q68CJ9 461 aa14.5□□□□□ -0.09
VPS29-211ENST00000553128 PLA2G4FQ68DD2 849 aa14.5□□□□□ -0.09
VPS29-211ENST00000553128 ELMSAN1Q6PJG2 1045 aa14.5□□□□□ -0.09
VPS29-211ENST00000553128 SYNE3Q6ZMZ3 975 aa14.5□□□□□ -0.09
VPS29-211ENST00000553128 RABGGTAQ92696 567 aa14.5□□□□□ -0.09
VPS29-211ENST00000553128 SLC5A5Q92911 643 aa14.5□□□□□ -0.09
VPS29-211ENST00000553128 CHAMP1Q96JM3 812 aa14.5□□□□□ -0.09
VPS29-211ENST00000553128 ZFP42Q96MM3 310 aa14.5□□□□□ -0.09
VPS29-211ENST00000553128 KXD1Q9BQD3 176 aa14.5□□□□□ -0.09
VPS29-211ENST00000553128 ZMYND12Q9H0C1 365 aa14.5□□□□□ -0.09
VPS29-211ENST00000553128 CDH7Q9ULB5 785 aa14.5□□□□□ -0.09
VPS29-211ENST00000553128 ARL5CA6NH57 179 aa14.49□□□□□ -0.09
VPS29-211ENST00000553128 SHISA7A6NL88 538 aa14.49□□□□□ -0.09
VPS29-211ENST00000553128 GOLGA8AA7E2F4 631 aa14.49□□□□□ -0.09
VPS29-211ENST00000553128 GOLGA8BA8MQT2 603 aa14.49□□□□□ -0.09
VPS29-211ENST00000553128 ZBTB43O43298 467 aa14.49□□□□□ -0.09
VPS29-211ENST00000553128 GAS7O60861 476 aa14.49□□□□□ -0.09
VPS29-211ENST00000553128 ZMYND10O75800 440 aa14.49□□□□□ -0.09
VPS29-211ENST00000553128 NCLP19338 710 aaKnown RBP14.49□□□□□ -0.09
VPS29-211ENST00000553128 MLH1P40692 756 aa14.49□□□□□ -0.09
VPS29-211ENST00000553128 SCNN1GP51170 649 aa14.49□□□□□ -0.09
VPS29-211ENST00000553128 SPEM2Q0P670 501 aa14.49□□□□□ -0.09
VPS29-211ENST00000553128 FZD5Q13467 585 aa14.49□□□□□ -0.09
VPS29-211ENST00000553128 NECTIN1Q15223 517 aa14.49□□□□□ -0.09
VPS29-211ENST00000553128 XKR3Q5GH77 459 aa14.49□□□□□ -0.09
VPS29-211ENST00000553128 LRCH2Q5VUJ6 765 aa14.49□□□□□ -0.09
VPS29-211ENST00000553128 ANO5Q75V66 913 aa14.49□□□□□ -0.09
VPS29-211ENST00000553128 REXO1Q8N1G1 1221 aaKnown RBP14.49□□□□□ -0.09
VPS29-211ENST00000553128 ZNF579Q8NAF0 562 aaKnown RBP14.49□□□□□ -0.09
VPS29-211ENST00000553128 ITFG1Q8TB96 612 aa14.49□□□□□ -0.09
VPS29-211ENST00000553128 FGF13Q92913 245 aa14.49□□□□□ -0.09
VPS29-211ENST00000553128 SECISBP2LQ93073 1101 aaKnown RBP14.49□□□□□ -0.09
VPS29-211ENST00000553128 GAD1Q99259 594 aa14.49□□□□□ -0.09
VPS29-211ENST00000553128 EIF2AQ9BY44 585 aaKnown RBP14.49□□□□□ -0.09
VPS29-211ENST00000553128 OSBPL6Q9BZF3 934 aa14.49□□□□□ -0.09
VPS29-211ENST00000553128 PRMT8Q9NR22 394 aaPredicted RBP14.49□□□□□ -0.09
VPS29-211ENST00000553128 CACNG4Q9UBN1 327 aa14.49□□□□□ -0.09
VPS29-211ENST00000553128 HES2Q9Y543 173 aa14.49□□□□□ -0.09
VPS29-211ENST00000553128 ESYT2A0FGR8 921 aa14.48□□□□□ -0.09
VPS29-211ENST00000553128 DDX11L8A8MPP1 907 aa14.48□□□□□ -0.09
VPS29-211ENST00000553128 PSMD10O75832 226 aa14.48□□□□□ -0.09
VPS29-211ENST00000553128 SRGAP2CP0DJJ0 459 aa14.48□□□□□ -0.09
VPS29-211ENST00000553128 SFNP31947 248 aa14.48□□□□□ -0.09
VPS29-211ENST00000553128 ADD1P35611 737 aaKnown RBP14.48□□□□□ -0.09
VPS29-211ENST00000553128 JAK3P52333 1124 aa14.48□□□□□ -0.09
VPS29-211ENST00000553128 PRSS55Q6UWB4 352 aaPredicted RBP14.48□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms