RNA–Protein interactions for RNA: ENST00000552896.1

TRAFD1-209, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

APPRIS ALT2 TSL 3

Gene TRAFD1, Length 983 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-209ENST00000552896 TBKBP1A7MCY6 615 aa12.89□□□□□ -0.35
TRAFD1-209ENST00000552896 SFI1A8K8P3 1242 aa12.89□□□□□ -0.35
TRAFD1-209ENST00000552896 K7ENM7 598 aa12.89□□□□□ -0.35
TRAFD1-209ENST00000552896 K7ERI5 159 aa12.89□□□□□ -0.35
TRAFD1-209ENST00000552896 MAPTP10636 758 aaKnown RBP12.89□□□□□ -0.35
TRAFD1-209ENST00000552896 PFKFB1P16118 471 aa12.89□□□□□ -0.35
TRAFD1-209ENST00000552896 GAP43P17677 238 aa12.89□□□□□ -0.35
TRAFD1-209ENST00000552896 GATMP50440 423 aa12.89□□□□□ -0.35
TRAFD1-209ENST00000552896 GRIN2CQ14957 1233 aa12.89□□□□□ -0.35
TRAFD1-209ENST00000552896 DCAF4L1Q3SXM0 396 aa12.89□□□□□ -0.35
TRAFD1-209ENST00000552896 PAN2Q504Q3 1202 aaKnown RBP12.89□□□□□ -0.35
TRAFD1-209ENST00000552896 TAS1R3Q7RTX0 852 aa12.89□□□□□ -0.35
TRAFD1-209ENST00000552896 SPRED2Q7Z698 418 aa12.89□□□□□ -0.35
TRAFD1-209ENST00000552896 MRPL10Q7Z7H8 261 aaKnown RBP12.89□□□□□ -0.35
TRAFD1-209ENST00000552896 HACE1Q8IYU2 909 aa12.89□□□□□ -0.35
TRAFD1-209ENST00000552896 RNF169Q8NCN4 708 aa12.89□□□□□ -0.35
TRAFD1-209ENST00000552896 DNAJC19Q96DA6 116 aa12.89□□□□□ -0.35
TRAFD1-209ENST00000552896 CASD1Q96PB1 797 aa12.89□□□□□ -0.35
TRAFD1-209ENST00000552896 EIF2AQ9BY44 585 aaKnown RBP12.89□□□□□ -0.35
TRAFD1-209ENST00000552896 MRPL9Q9BYD2 267 aaKnown RBP12.89□□□□□ -0.35
TRAFD1-209ENST00000552896 MRPL4Q9BYD3 311 aaKnown RBP12.89□□□□□ -0.35
TRAFD1-209ENST00000552896 PANK2Q9BZ23 570 aa12.89□□□□□ -0.35
TRAFD1-209ENST00000552896 TRIM6Q9C030 488 aaPredicted RBP12.89□□□□□ -0.35
TRAFD1-209ENST00000552896 LRRC27Q9C0I9 530 aa12.89□□□□□ -0.35
TRAFD1-209ENST00000552896 KCNH3Q9ULD8 1083 aa12.89□□□□□ -0.35
TRAFD1-209ENST00000552896 HPSEQ9Y251 543 aa12.89□□□□□ -0.35
TRAFD1-209ENST00000552896 IPPQ9Y573 584 aa12.89□□□□□ -0.35
TRAFD1-209ENST00000552896 MRPL42Q9Y6G3 142 aaKnown RBP12.89□□□□□ -0.35
TRAFD1-209ENST00000552896 FAM237AA0A1B0GTK4 181 aa12.88□□□□□ -0.35
TRAFD1-209ENST00000552896 FRMD3A2A2Y4 597 aa12.88□□□□□ -0.35
TRAFD1-209ENST00000552896 TTLL13PA6NNM8 815 aa12.88□□□□□ -0.35
TRAFD1-209ENST00000552896 C5orf67F2Z3F1 127 aa12.88□□□□□ -0.35
TRAFD1-209ENST00000552896 INPPL1O15357 1258 aa12.88□□□□□ -0.35
TRAFD1-209ENST00000552896 POLR2DO15514 142 aaKnown RBP12.88□□□□□ -0.35
TRAFD1-209ENST00000552896 LIG1P18858 919 aa12.88□□□□□ -0.35
TRAFD1-209ENST00000552896 CTNNB1P35222 781 aa12.88□□□□□ -0.35
TRAFD1-209ENST00000552896 AMPD3Q01432 767 aa12.88□□□□□ -0.35
TRAFD1-209ENST00000552896 STRN3Q13033 797 aa12.88□□□□□ -0.35
TRAFD1-209ENST00000552896 TMEM132AQ24JP5 1023 aa12.88□□□□□ -0.35
TRAFD1-209ENST00000552896 NT5DC1Q5TFE4 455 aa12.88□□□□□ -0.35
TRAFD1-209ENST00000552896 ATF7IP2Q5U623 682 aa12.88□□□□□ -0.35
TRAFD1-209ENST00000552896 CNNM4Q6P4Q7 775 aa12.88□□□□□ -0.35
TRAFD1-209ENST00000552896 GLB1LQ6UWU2 654 aa12.88□□□□□ -0.35
TRAFD1-209ENST00000552896 DYMQ7RTS9 669 aa12.88□□□□□ -0.35
TRAFD1-209ENST00000552896 APBB1IPQ7Z5R6 666 aaPredicted RBP12.88□□□□□ -0.35
TRAFD1-209ENST00000552896 SFR1Q86XK3 245 aa12.88□□□□□ -0.35
TRAFD1-209ENST00000552896 FAM178BQ8IXR5 827 aa12.88□□□□□ -0.35
TRAFD1-209ENST00000552896 MYCT1Q8N699 235 aa12.88□□□□□ -0.35
TRAFD1-209ENST00000552896 SMG8Q8ND04 991 aaKnown RBP12.88□□□□□ -0.35
TRAFD1-209ENST00000552896 FBXO22Q8NEZ5 403 aa12.88□□□□□ -0.35
TRAFD1-209ENST00000552896 HELQQ8TDG4 1101 aa12.88□□□□□ -0.35
TRAFD1-209ENST00000552896 ARNTL2Q8WYA1 636 aa12.88□□□□□ -0.35
TRAFD1-209ENST00000552896 MRPS27Q92552 414 aaKnown RBP12.88□□□□□ -0.35
TRAFD1-209ENST00000552896 FIZ1Q96SL8 496 aa12.88□□□□□ -0.35
TRAFD1-209ENST00000552896 GAS2L1Q99501 681 aaPredicted RBP12.88□□□□□ -0.35
TRAFD1-209ENST00000552896 CDX2Q99626 313 aaPredicted RBP12.88□□□□□ -0.35
TRAFD1-209ENST00000552896 ADPGKQ9BRR6 497 aa12.88□□□□□ -0.35
TRAFD1-209ENST00000552896 C17orf80Q9BSJ5 609 aa12.88□□□□□ -0.35
TRAFD1-209ENST00000552896 NXF3Q9H4D5 531 aaKnown RBP12.88□□□□□ -0.35
TRAFD1-209ENST00000552896 ST6GALNAC4Q9H4F1 302 aa12.88□□□□□ -0.35
TRAFD1-209ENST00000552896 PRDM12Q9H4Q4 367 aa12.88□□□□□ -0.35
TRAFD1-209ENST00000552896 GDPD2Q9HCC8 539 aa12.88□□□□□ -0.35
TRAFD1-209ENST00000552896 CHMP5Q9NZZ3 219 aa12.88□□□□□ -0.35
TRAFD1-209ENST00000552896 USP25Q9UHP3 1055 aa12.88□□□□□ -0.35
TRAFD1-209ENST00000552896 TNFSF13BQ9Y275 285 aa12.88□□□□□ -0.35
TRAFD1-209ENST00000552896 PRUNE2Q8WUY3 3088 aa12.87□□□□□ -0.35
TRAFD1-209ENST00000552896 EPOPA6NHQ4 379 aa12.87□□□□□ -0.35
TRAFD1-209ENST00000552896 TRAK2O60296 914 aa12.87□□□□□ -0.35
TRAFD1-209ENST00000552896 NPTXRO95502 500 aa12.87□□□□□ -0.35
TRAFD1-209ENST00000552896 LAG3P18627 525 aa12.87□□□□□ -0.35
TRAFD1-209ENST00000552896 EPC2Q52LR7 807 aa12.87□□□□□ -0.35
TRAFD1-209ENST00000552896 AGMOQ6ZNB7 445 aa12.87□□□□□ -0.35
TRAFD1-209ENST00000552896 HAUS6Q7Z4H7 955 aa12.87□□□□□ -0.35
TRAFD1-209ENST00000552896 TMEM192Q8IY95 271 aa12.87□□□□□ -0.35
TRAFD1-209ENST00000552896 CEP57L1Q8IYX8 460 aa12.87□□□□□ -0.35
TRAFD1-209ENST00000552896 GDPD5Q8WTR4 605 aa12.87□□□□□ -0.35
TRAFD1-209ENST00000552896 LPPQ93052 612 aa12.87□□□□□ -0.35
TRAFD1-209ENST00000552896 HVCN1Q96D96 273 aa12.87□□□□□ -0.35
TRAFD1-209ENST00000552896 ACO2Q99798 780 aaKnown RBP12.87□□□□□ -0.35
TRAFD1-209ENST00000552896 C11orf84Q9BUA3 381 aaPredicted RBP12.87□□□□□ -0.35
TRAFD1-209ENST00000552896 PLVAPQ9BX97 442 aa12.87□□□□□ -0.35
TRAFD1-209ENST00000552896 TRIM9Q9C026 710 aa12.87□□□□□ -0.35
TRAFD1-209ENST00000552896 ZHX3Q9H4I2 956 aa12.87□□□□□ -0.35
TRAFD1-209ENST00000552896 CERS4Q9HA82 394 aa12.87□□□□□ -0.35
TRAFD1-209ENST00000552896 RSAD1Q9HA92 442 aa12.87□□□□□ -0.35
TRAFD1-209ENST00000552896 UBN1Q9NPG3 1134 aa12.87□□□□□ -0.35
TRAFD1-209ENST00000552896 OLFML3Q9NRN5 406 aa12.87□□□□□ -0.35
TRAFD1-209ENST00000552896 MTUS1Q9ULD2 1270 aa12.87□□□□□ -0.35
TRAFD1-209ENST00000552896 A0A1B0GVL5 298 aa12.86□□□□□ -0.35
TRAFD1-209ENST00000552896 CARNS1A5YM72 827 aa12.86□□□□□ -0.35
TRAFD1-209ENST00000552896 MEIS3P2A8K0S8 358 aa12.86□□□□□ -0.35
TRAFD1-209ENST00000552896 ACTN4O43707 911 aaKnown RBP12.86□□□□□ -0.35
TRAFD1-209ENST00000552896 PIGRP01833 764 aa12.86□□□□□ -0.35
TRAFD1-209ENST00000552896 RB1P06400 928 aa12.86□□□□□ -0.35
TRAFD1-209ENST00000552896 SLFN14P0C7P3 912 aa12.86□□□□□ -0.35
TRAFD1-209ENST00000552896 ITGA4P13612 1032 aa12.86□□□□□ -0.35
TRAFD1-209ENST00000552896 FOSL2P15408 326 aa12.86□□□□□ -0.35
TRAFD1-209ENST00000552896 PROZP22891 400 aa12.86□□□□□ -0.35
TRAFD1-209ENST00000552896 BMPR1AP36894 532 aa12.86□□□□□ -0.35
TRAFD1-209ENST00000552896 CSPP1Q1MSJ5 1256 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms