RNA–Protein interactions for RNA: ENST00000552375.1

DDX54-210, Transcript of DEAD-box helicase 54, humanhuman

TSL 5

Gene DDX54, Length 780 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-210ENST00000552375 NT5C1B-RDH14C9J2C7 533 aa15.51■□□□□ 0.07
DDX54-210ENST00000552375 E9PMD0 336 aa15.51■□□□□ 0.07
DDX54-210ENST00000552375 B4GALT3O60512 393 aa15.51■□□□□ 0.07
DDX54-210ENST00000552375 MUTP22033 750 aa15.51■□□□□ 0.07
DDX54-210ENST00000552375 MARCKSP29966 332 aaPredicted RBP15.51■□□□□ 0.07
DDX54-210ENST00000552375 RBM10P98175 930 aaKnown RBP15.51■□□□□ 0.07
DDX54-210ENST00000552375 PKP1Q13835 747 aa15.51■□□□□ 0.07
DDX54-210ENST00000552375 KCNC3Q14003 757 aa15.51■□□□□ 0.07
DDX54-210ENST00000552375 SMC1AQ14683 1233 aaKnown RBP15.51■□□□□ 0.07
DDX54-210ENST00000552375 KRT79Q5XKE5 535 aa15.51■□□□□ 0.07
DDX54-210ENST00000552375 CDCA2Q69YH5 1023 aaPredicted RBP15.51■□□□□ 0.07
DDX54-210ENST00000552375 SMG8Q8ND04 991 aaKnown RBP15.51■□□□□ 0.07
DDX54-210ENST00000552375 BCL7CQ8WUZ0 217 aaPredicted RBP15.51■□□□□ 0.07
DDX54-210ENST00000552375 MMTAG2Q9BU76 263 aaKnown RBP15.51■□□□□ 0.07
DDX54-210ENST00000552375 EIF2AQ9BY44 585 aaKnown RBP15.51■□□□□ 0.07
DDX54-210ENST00000552375 CSRNP2Q9H175 543 aa15.51■□□□□ 0.07
DDX54-210ENST00000552375 POLD4Q9HCU8 107 aa15.51■□□□□ 0.07
DDX54-210ENST00000552375 IPPQ9Y573 584 aa15.51■□□□□ 0.07
DDX54-210ENST00000552375 LRRIQ4A6NIV6 560 aa15.5■□□□□ 0.07
DDX54-210ENST00000552375 PI4K2BG5E9Z4 385 aa15.5■□□□□ 0.07
DDX54-210ENST00000552375 INPPL1O15357 1258 aa15.5■□□□□ 0.07
DDX54-210ENST00000552375 GALTP07902 379 aa15.5■□□□□ 0.07
DDX54-210ENST00000552375 ARF4P18085 180 aaPredicted RBP15.5■□□□□ 0.07
DDX54-210ENST00000552375 SLC11A1P49279 550 aa15.5■□□□□ 0.07
DDX54-210ENST00000552375 NCBP1Q09161 790 aaKnown RBP15.5■□□□□ 0.07
DDX54-210ENST00000552375 TMEM184AQ6ZMB5 413 aa15.5■□□□□ 0.07
DDX54-210ENST00000552375 KCNK18Q7Z418 384 aa15.5■□□□□ 0.07
DDX54-210ENST00000552375 IGSF21Q96ID5 467 aa15.5■□□□□ 0.07
DDX54-210ENST00000552375 CPB2Q96IY4 423 aa15.5■□□□□ 0.07
DDX54-210ENST00000552375 USP28Q96RU2 1077 aa15.5■□□□□ 0.07
DDX54-210ENST00000552375 GBP3Q9H0R5 595 aa15.5■□□□□ 0.07
DDX54-210ENST00000552375 ZBP1Q9H171 429 aa15.5■□□□□ 0.07
DDX54-210ENST00000552375 BHMT2Q9H2M3 363 aa15.5■□□□□ 0.07
DDX54-210ENST00000552375 UBN1Q9NPG3 1134 aa15.5■□□□□ 0.07
DDX54-210ENST00000552375 DNAJB4Q9UDY4 337 aa15.5■□□□□ 0.07
DDX54-210ENST00000552375 USP15Q9Y4E8 981 aaPredicted RBP15.5■□□□□ 0.07
DDX54-210ENST00000552375 C5orf42Q9H799 3197 aa15.49■□□□□ 0.07
DDX54-210ENST00000552375 C2orf71A6NGG8 1288 aa15.49■□□□□ 0.07
DDX54-210ENST00000552375 B4GALT5O43286 388 aa15.49■□□□□ 0.07
DDX54-210ENST00000552375 ITGA4P13612 1032 aa15.49■□□□□ 0.07
DDX54-210ENST00000552375 AFF1P51825 1210 aaKnown RBP15.49■□□□□ 0.07
DDX54-210ENST00000552375 BMS1Q14692 1282 aaKnown RBP15.49■□□□□ 0.07
DDX54-210ENST00000552375 SPECC1Q5M775 1068 aa15.49■□□□□ 0.07
DDX54-210ENST00000552375 PADI6Q6TGC4 694 aa15.49■□□□□ 0.07
DDX54-210ENST00000552375 PPP4R3CPQ6ZMV5 832 aa15.49■□□□□ 0.07
DDX54-210ENST00000552375 DDX53Q86TM3 631 aaKnown RBP15.49■□□□□ 0.07
DDX54-210ENST00000552375 CABP7Q86V35 215 aa15.49■□□□□ 0.07
DDX54-210ENST00000552375 ZNF280BQ86YH2 543 aa15.49■□□□□ 0.07
DDX54-210ENST00000552375 ZBTB8OSQ8IWT0 167 aa15.49■□□□□ 0.07
DDX54-210ENST00000552375 VPS52Q8N1B4 723 aa15.49■□□□□ 0.07
DDX54-210ENST00000552375 MRPL43Q8N983 215 aaKnown RBP15.49■□□□□ 0.07
DDX54-210ENST00000552375 CDK5RAP3Q96JB5 506 aa15.49■□□□□ 0.07
DDX54-210ENST00000552375 PRIMPOLQ96LW4 560 aa15.49■□□□□ 0.07
DDX54-210ENST00000552375 PNMA5Q96PV4 448 aa15.49■□□□□ 0.07
DDX54-210ENST00000552375 TMEM175Q9BSA9 504 aa15.49■□□□□ 0.07
DDX54-210ENST00000552375 TRIM6Q9C030 488 aaPredicted RBP15.49■□□□□ 0.07
DDX54-210ENST00000552375 KANSL3Q9P2N6 904 aa15.49■□□□□ 0.07
DDX54-210ENST00000552375 STK39Q9UEW8 545 aa15.49■□□□□ 0.07
DDX54-210ENST00000552375 STK24Q9Y6E0 443 aa15.49■□□□□ 0.07
DDX54-210ENST00000552375 ZMYM2Q9UBW7 1377 aa15.49■□□□□ 0.07
DDX54-210ENST00000552375 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP15.48■□□□□ 0.07
DDX54-210ENST00000552375 DCXO43602 365 aa15.48■□□□□ 0.07
DDX54-210ENST00000552375 POMCP01189 267 aa15.48■□□□□ 0.07
DDX54-210ENST00000552375 SSBP05455 408 aaKnown RBP eCLIP15.48■□□□□ 0.07
DDX54-210ENST00000552375 CTSAP10619 480 aa15.48■□□□□ 0.07
DDX54-210ENST00000552375 CYP11B2P19099 503 aa15.48■□□□□ 0.07
DDX54-210ENST00000552375 COL9A1P20849 921 aa15.48■□□□□ 0.07
DDX54-210ENST00000552375 MLH1P40692 756 aa15.48■□□□□ 0.07
DDX54-210ENST00000552375 PDIA5Q14554 519 aa15.48■□□□□ 0.07
DDX54-210ENST00000552375 PTPAQ15257 358 aa15.48■□□□□ 0.07
DDX54-210ENST00000552375 TMEM31Q5JXX7 168 aa15.48■□□□□ 0.07
DDX54-210ENST00000552375 ANKRD54Q6NXT1 300 aa15.48■□□□□ 0.07
DDX54-210ENST00000552375 HACE1Q8IYU2 909 aa15.48■□□□□ 0.07
DDX54-210ENST00000552375 RASSF8Q8NHQ8 419 aa15.48■□□□□ 0.07
DDX54-210ENST00000552375 BSNDQ8WZ55 320 aa15.48■□□□□ 0.07
DDX54-210ENST00000552375 SUSD6Q92537 303 aa15.48■□□□□ 0.07
DDX54-210ENST00000552375 CASP10Q92851 521 aa15.48■□□□□ 0.07
DDX54-210ENST00000552375 C2orf40Q9H1Z8 148 aa15.48■□□□□ 0.07
DDX54-210ENST00000552375 NXF3Q9H4D5 531 aaKnown RBP15.48■□□□□ 0.07
DDX54-210ENST00000552375 C11orf16Q9NQ32 467 aa15.48■□□□□ 0.07
DDX54-210ENST00000552375 PRMT7Q9NVM4 692 aaPredicted RBP15.48■□□□□ 0.07
DDX54-210ENST00000552375 DAXXQ9UER7 740 aaPredicted RBP15.48■□□□□ 0.07
DDX54-210ENST00000552375 HES2Q9Y543 173 aa15.48■□□□□ 0.07
DDX54-210ENST00000552375 HCFC2Q9Y5Z7 792 aa15.48■□□□□ 0.07
DDX54-210ENST00000552375 IRAK3Q9Y616 596 aa15.48■□□□□ 0.07
DDX54-210ENST00000552375 ARL5CA6NH57 179 aa15.47■□□□□ 0.07
DDX54-210ENST00000552375 GPR37L1O60883 481 aa15.47■□□□□ 0.07
DDX54-210ENST00000552375 DDHD2O94830 711 aa15.47■□□□□ 0.07
DDX54-210ENST00000552375 BMP15O95972 392 aa15.47■□□□□ 0.07
DDX54-210ENST00000552375 F13A1P00488 732 aa15.47■□□□□ 0.07
DDX54-210ENST00000552375 ZSCAN22P10073 491 aaPredicted RBP15.47■□□□□ 0.07
DDX54-210ENST00000552375 ALADP13716 330 aa15.47■□□□□ 0.07
DDX54-210ENST00000552375 HOXB8P17481 243 aaPredicted RBP15.47■□□□□ 0.07
DDX54-210ENST00000552375 CA8P35219 290 aa15.47■□□□□ 0.07
DDX54-210ENST00000552375 NAMPTP43490 491 aa15.47■□□□□ 0.07
DDX54-210ENST00000552375 RAD51AP2Q09MP3 1159 aa15.47■□□□□ 0.07
DDX54-210ENST00000552375 GIT2Q14161 759 aa15.47■□□□□ 0.07
DDX54-210ENST00000552375 KARSQ15046 597 aaKnown RBP15.47■□□□□ 0.07
DDX54-210ENST00000552375 FAM187BQ17R55 369 aa15.47■□□□□ 0.07
DDX54-210ENST00000552375 ARL6IP4Q66PJ3 421 aaKnown RBP15.47■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms