RNA–Protein interactions for RNA: ENST00000551716.5

CACNB3-220, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 3

Gene CACNB3, Length 544 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-220ENST00000551716 CNTNAP5Q8WYK1 1306 aa17.18■□□□□ 0.34
CACNB3-220ENST00000551716 TGM5O43548 720 aa17.17■□□□□ 0.34
CACNB3-220ENST00000551716 LRP3O75074 770 aa17.17■□□□□ 0.34
CACNB3-220ENST00000551716 EFEMP2O95967 443 aa17.17■□□□□ 0.34
CACNB3-220ENST00000551716 POMCP01189 267 aa17.17■□□□□ 0.34
CACNB3-220ENST00000551716 RPS9P46781 194 aaKnown RBP17.17■□□□□ 0.34
CACNB3-220ENST00000551716 OR1G1P47890 313 aa17.17■□□□□ 0.34
CACNB3-220ENST00000551716 DRP2Q13474 957 aa17.17■□□□□ 0.34
CACNB3-220ENST00000551716 PPM1JQ5JR12 505 aa17.17■□□□□ 0.34
CACNB3-220ENST00000551716 TTC22Q5TAA0 569 aa17.17■□□□□ 0.34
CACNB3-220ENST00000551716 LILRA6Q6PI73 481 aa17.17■□□□□ 0.34
CACNB3-220ENST00000551716 TAS1R1Q7RTX1 841 aa17.17■□□□□ 0.34
CACNB3-220ENST00000551716 RNF168Q8IYW5 571 aaPredicted RBP17.17■□□□□ 0.34
CACNB3-220ENST00000551716 RDM1Q8NG50 284 aa17.17■□□□□ 0.34
CACNB3-220ENST00000551716 CCDC12Q8WUD4 166 aaPredicted RBP17.17■□□□□ 0.34
CACNB3-220ENST00000551716 DDX1Q92499 740 aaKnown RBP17.17■□□□□ 0.34
CACNB3-220ENST00000551716 C6orf50Q9HD87 102 aa17.17■□□□□ 0.34
CACNB3-220ENST00000551716 LTB4R2Q9NPC1 389 aa17.17■□□□□ 0.34
CACNB3-220ENST00000551716 CHST7Q9NS84 486 aa17.17■□□□□ 0.34
CACNB3-220ENST00000551716 AGPAT5Q9NUQ2 364 aa17.17■□□□□ 0.34
CACNB3-220ENST00000551716 PRG3Q9Y2Y8 225 aaPredicted RBP17.17■□□□□ 0.34
CACNB3-220ENST00000551716 MYH9P35579 1960 aaKnown RBP17.17■□□□□ 0.34
CACNB3-220ENST00000551716 C2orf16Q68DN1 1984 aa17.17■□□□□ 0.34
CACNB3-220ENST00000551716 SLC30A4O14863 429 aa17.16■□□□□ 0.34
CACNB3-220ENST00000551716 FOXD2O60548 495 aaPredicted RBP17.16■□□□□ 0.34
CACNB3-220ENST00000551716 ZMYND10O75800 440 aa17.16■□□□□ 0.34
CACNB3-220ENST00000551716 MYBP10242 640 aa17.16■□□□□ 0.34
CACNB3-220ENST00000551716 FUT2Q10981 343 aa17.16■□□□□ 0.34
CACNB3-220ENST00000551716 PPP2R5DQ14738 602 aa17.16■□□□□ 0.34
CACNB3-220ENST00000551716 RTN1Q16799 776 aa17.16■□□□□ 0.34
CACNB3-220ENST00000551716 USP41Q3LFD5 358 aa17.16■□□□□ 0.34
CACNB3-220ENST00000551716 PARM1Q6UWI2 310 aa17.16■□□□□ 0.34
CACNB3-220ENST00000551716 COLGALT2Q8IYK4 626 aa17.16■□□□□ 0.34
CACNB3-220ENST00000551716 REXO1Q8N1G1 1221 aaKnown RBP17.16■□□□□ 0.34
CACNB3-220ENST00000551716 CELF5Q8N6W0 485 aaKnown RBP17.16■□□□□ 0.34
CACNB3-220ENST00000551716 FGF14Q92915 247 aa17.16■□□□□ 0.34
CACNB3-220ENST00000551716 RPP25Q9BUL9 199 aaKnown RBP17.16■□□□□ 0.34
CACNB3-220ENST00000551716 MARCH5Q9NX47 278 aa17.16■□□□□ 0.34
CACNB3-220ENST00000551716 SEPT9Q9UHD8 586 aaPredicted RBP17.16■□□□□ 0.34
CACNB3-220ENST00000551716 MTF2Q9Y483 593 aaPredicted RBP17.16■□□□□ 0.34
CACNB3-220ENST00000551716 ESYT2A0FGR8 921 aa17.15■□□□□ 0.34
CACNB3-220ENST00000551716 GAS7O60861 476 aa17.15■□□□□ 0.34
CACNB3-220ENST00000551716 MAFO75444 373 aaPredicted RBP17.15■□□□□ 0.34
CACNB3-220ENST00000551716 IGHDP01880 384 aa17.15■□□□□ 0.34
CACNB3-220ENST00000551716 HNRNPA1P09651 372 aaKnown RBP eCLIP17.15■□□□□ 0.34
CACNB3-220ENST00000551716 NCLP19338 710 aaKnown RBP17.15■□□□□ 0.34
CACNB3-220ENST00000551716 GNA11P29992 359 aa17.15■□□□□ 0.34
CACNB3-220ENST00000551716 MTERF2Q49AM1 385 aa17.15■□□□□ 0.34
CACNB3-220ENST00000551716 MAMSTRQ6ZN01 415 aa17.15■□□□□ 0.34
CACNB3-220ENST00000551716 SRGAP1Q7Z6B7 1085 aa17.15■□□□□ 0.34
CACNB3-220ENST00000551716 EXOC8Q8IYI6 725 aa17.15■□□□□ 0.34
CACNB3-220ENST00000551716 NLRP4Q96MN2 994 aa17.15■□□□□ 0.34
CACNB3-220ENST00000551716 ZMYND12Q9H0C1 365 aa17.15■□□□□ 0.34
CACNB3-220ENST00000551716 CFAP47Q6ZTR5 3102 aa17.14■□□□□ 0.33
CACNB3-220ENST00000551716 ITGA4P13612 1032 aa17.14■□□□□ 0.33
CACNB3-220ENST00000551716 AFF1P51825 1210 aaKnown RBP17.14■□□□□ 0.33
CACNB3-220ENST00000551716 DMWDQ09019 674 aa17.14■□□□□ 0.33
CACNB3-220ENST00000551716 LAIR1Q6GTX8 287 aa17.14■□□□□ 0.33
CACNB3-220ENST00000551716 APOA5Q6Q788 366 aa17.14■□□□□ 0.33
CACNB3-220ENST00000551716 ZNF852Q6ZMS4 543 aa17.14■□□□□ 0.33
CACNB3-220ENST00000551716 EXOC6Q8TAG9 804 aa17.14■□□□□ 0.33
CACNB3-220ENST00000551716 TEKT3Q9BXF9 490 aa17.14■□□□□ 0.33
CACNB3-220ENST00000551716 IFT122Q9HBG6 1241 aa17.14■□□□□ 0.33
CACNB3-220ENST00000551716 PRMT8Q9NR22 394 aaPredicted RBP17.14■□□□□ 0.33
CACNB3-220ENST00000551716 ZBTB43O43298 467 aa17.13■□□□□ 0.33
CACNB3-220ENST00000551716 RETP07949 1114 aa17.13■□□□□ 0.33
CACNB3-220ENST00000551716 GSPT1P15170 499 aaKnown RBP17.13■□□□□ 0.33
CACNB3-220ENST00000551716 USP11P51784 963 aa17.13■□□□□ 0.33
CACNB3-220ENST00000551716 DSC1Q08554 894 aa17.13■□□□□ 0.33
CACNB3-220ENST00000551716 NCBP1Q09161 790 aaKnown RBP17.13■□□□□ 0.33
CACNB3-220ENST00000551716 PCBP1Q15365 356 aaKnown RBP eCLIP17.13■□□□□ 0.33
CACNB3-220ENST00000551716 UGCGQ16739 394 aa17.13■□□□□ 0.33
CACNB3-220ENST00000551716 LRCH2Q5VUJ6 765 aa17.13■□□□□ 0.33
CACNB3-220ENST00000551716 GRASPQ7Z6J2 395 aaPredicted RBP17.13■□□□□ 0.33
CACNB3-220ENST00000551716 BICD2Q8TD16 824 aa17.13■□□□□ 0.33
CACNB3-220ENST00000551716 SLC5A5Q92911 643 aa17.13■□□□□ 0.33
CACNB3-220ENST00000551716 FGF13Q92913 245 aa17.13■□□□□ 0.33
CACNB3-220ENST00000551716 MBOAT7Q96N66 472 aa17.13■□□□□ 0.33
CACNB3-220ENST00000551716 CEP89Q96ST8 783 aa17.13■□□□□ 0.33
CACNB3-220ENST00000551716 IER2Q9BTL4 223 aa17.13■□□□□ 0.33
CACNB3-220ENST00000551716 PARD6AQ9NPB6 346 aa17.13■□□□□ 0.33
CACNB3-220ENST00000551716 ATRXP46100 2492 aa17.12■□□□□ 0.33
CACNB3-220ENST00000551716 USP24Q9UPU5 2620 aa17.12■□□□□ 0.33
CACNB3-220ENST00000551716 ARL5CA6NH57 179 aa17.12■□□□□ 0.33
CACNB3-220ENST00000551716 DDX11L8A8MPP1 907 aa17.12■□□□□ 0.33
CACNB3-220ENST00000551716 MSH4O15457 936 aa17.12■□□□□ 0.33
CACNB3-220ENST00000551716 CHMP2AO43633 222 aa17.12■□□□□ 0.33
CACNB3-220ENST00000551716 XYLBO75191 536 aa17.12■□□□□ 0.33
CACNB3-220ENST00000551716 HOXA11P31270 313 aaPredicted RBP17.12■□□□□ 0.33
CACNB3-220ENST00000551716 ADCY1Q08828 1119 aa17.12■□□□□ 0.33
CACNB3-220ENST00000551716 SPEM2Q0P670 501 aa17.12■□□□□ 0.33
CACNB3-220ENST00000551716 PFKFB3Q16875 520 aaPredicted RBP17.12■□□□□ 0.33
CACNB3-220ENST00000551716 LIN9Q5TKA1 542 aa17.12■□□□□ 0.33
CACNB3-220ENST00000551716 MIER3Q7Z3K6 550 aa17.12■□□□□ 0.33
CACNB3-220ENST00000551716 KSR1Q8IVT5 923 aa17.12■□□□□ 0.33
CACNB3-220ENST00000551716 LENG9Q96B70 501 aa17.12■□□□□ 0.33
CACNB3-220ENST00000551716 PHF20Q9BVI0 1012 aa17.12■□□□□ 0.33
CACNB3-220ENST00000551716 LRRC2Q9BYS8 371 aa17.12■□□□□ 0.33
CACNB3-220ENST00000551716 FAM217BQ9NTX9 383 aaPredicted RBP17.12■□□□□ 0.33
CACNB3-220ENST00000551716 ANGPTL2Q9UKU9 493 aa17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms