RNA–Protein interactions for RNA: ENST00000550872.1

CHMP1A-209, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2

Gene CHMP1A, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-209ENST00000550872 EOMESO95936 686 aa17.83■□□□□ 0.44
CHMP1A-209ENST00000550872 SCP2P22307 547 aa17.83■□□□□ 0.44
CHMP1A-209ENST00000550872 HTRA4P83105 476 aaPredicted RBP17.83■□□□□ 0.44
CHMP1A-209ENST00000550872 COASYQ13057 564 aa17.83■□□□□ 0.44
CHMP1A-209ENST00000550872 ATF7IP2Q5U623 682 aa17.83■□□□□ 0.44
CHMP1A-209ENST00000550872 SLC27A1Q6PCB7 646 aa17.83■□□□□ 0.44
CHMP1A-209ENST00000550872 UNC13DQ70J99 1090 aa17.83■□□□□ 0.44
CHMP1A-209ENST00000550872 ZNF720Q7Z2F6 126 aa17.83■□□□□ 0.44
CHMP1A-209ENST00000550872 ENGASEQ8NFI3 743 aa17.83■□□□□ 0.44
CHMP1A-209ENST00000550872 GBP4Q96PP9 640 aa17.83■□□□□ 0.44
CHMP1A-209ENST00000550872 TARS2Q9BW92 718 aaKnown RBP17.83■□□□□ 0.44
CHMP1A-209ENST00000550872 TRIM6Q9C030 488 aaPredicted RBP17.83■□□□□ 0.44
CHMP1A-209ENST00000550872 PDZD7Q9H5P4 517 aa17.83■□□□□ 0.44
CHMP1A-209ENST00000550872 CUL9Q8IWT3 2517 aa17.83■□□□□ 0.44
CHMP1A-209ENST00000550872 PVALEFA0A1B0GWK0 134 aa17.82■□□□□ 0.44
CHMP1A-209ENST00000550872 ABCD1P33897 745 aa17.82■□□□□ 0.44
CHMP1A-209ENST00000550872 UBE2HP62256 183 aa17.82■□□□□ 0.44
CHMP1A-209ENST00000550872 GTF2BQ00403 316 aa17.82■□□□□ 0.44
CHMP1A-209ENST00000550872 SNW1Q13573 536 aaKnown RBP17.82■□□□□ 0.44
CHMP1A-209ENST00000550872 ZC2HC1CQ53FD0 456 aaPredicted RBP17.82■□□□□ 0.44
CHMP1A-209ENST00000550872 EEF1DP3Q658K8 133 aa17.82■□□□□ 0.44
CHMP1A-209ENST00000550872 KANK3Q6NY19 840 aa17.82■□□□□ 0.44
CHMP1A-209ENST00000550872 ZNF598Q86UK7 904 aaKnown RBP17.82■□□□□ 0.44
CHMP1A-209ENST00000550872 KCNN1Q92952 543 aa17.82■□□□□ 0.44
CHMP1A-209ENST00000550872 TIFAQ96CG3 184 aa17.82■□□□□ 0.44
CHMP1A-209ENST00000550872 PGBD4Q96DM1 585 aa17.82■□□□□ 0.44
CHMP1A-209ENST00000550872 BICD1Q96G01 975 aa17.82■□□□□ 0.44
CHMP1A-209ENST00000550872 ACO2Q99798 780 aaKnown RBP17.82■□□□□ 0.44
CHMP1A-209ENST00000550872 ADPGKQ9BRR6 497 aa17.82■□□□□ 0.44
CHMP1A-209ENST00000550872 ST6GALNAC4Q9H4F1 302 aa17.82■□□□□ 0.44
CHMP1A-209ENST00000550872 OLFML3Q9NRN5 406 aa17.82■□□□□ 0.44
CHMP1A-209ENST00000550872 MTMR10Q9NXD2 777 aa17.82■□□□□ 0.44
CHMP1A-209ENST00000550872 TBX20Q9UMR3 447 aa17.82■□□□□ 0.44
CHMP1A-209ENST00000550872 TNFSF13BQ9Y275 285 aa17.82■□□□□ 0.44
CHMP1A-209ENST00000550872 HOXA2O43364 376 aa17.81■□□□□ 0.44
CHMP1A-209ENST00000550872 GCNT3O95395 438 aa17.81■□□□□ 0.44
CHMP1A-209ENST00000550872 MYL1P05976 194 aa17.81■□□□□ 0.44
CHMP1A-209ENST00000550872 CA3P07451 260 aa17.81■□□□□ 0.44
CHMP1A-209ENST00000550872 FGFR1P11362 822 aa17.81■□□□□ 0.44
CHMP1A-209ENST00000550872 ATF7P17544 494 aaPredicted RBP17.81■□□□□ 0.44
CHMP1A-209ENST00000550872 GATMP50440 423 aa17.81■□□□□ 0.44
CHMP1A-209ENST00000550872 APBB1IPQ7Z5R6 666 aaPredicted RBP17.81■□□□□ 0.44
CHMP1A-209ENST00000550872 MRPL10Q7Z7H8 261 aaKnown RBP17.81■□□□□ 0.44
CHMP1A-209ENST00000550872 SMG8Q8ND04 991 aaKnown RBP17.81■□□□□ 0.44
CHMP1A-209ENST00000550872 LPPQ93052 612 aa17.81■□□□□ 0.44
CHMP1A-209ENST00000550872 ZNF689Q96CS4 500 aaPredicted RBP17.81■□□□□ 0.44
CHMP1A-209ENST00000550872 TCHPQ9BT92 498 aa17.81■□□□□ 0.44
CHMP1A-209ENST00000550872 SLC28A3Q9HAS3 691 aa17.81■□□□□ 0.44
CHMP1A-209ENST00000550872 IPPQ9Y573 584 aa17.81■□□□□ 0.44
CHMP1A-209ENST00000550872 PCDHB13Q9Y5F0 798 aa17.81■□□□□ 0.44
CHMP1A-209ENST00000550872 GBF1Q92538 1859 aa17.81■□□□□ 0.44
CHMP1A-209ENST00000550872 MYO9BQ13459 2157 aa17.81■□□□□ 0.44
CHMP1A-209ENST00000550872 LCHNA4D1U4 455 aa17.8■□□□□ 0.44
CHMP1A-209ENST00000550872 TBKBP1A7MCY6 615 aa17.8■□□□□ 0.44
CHMP1A-209ENST00000550872 NR1I2O75469 434 aa17.8■□□□□ 0.44
CHMP1A-209ENST00000550872 PRR29P0C7W0 189 aa17.8■□□□□ 0.44
CHMP1A-209ENST00000550872 ITGA4P13612 1032 aa17.8■□□□□ 0.44
CHMP1A-209ENST00000550872 ALCAMQ13740 583 aa17.8■□□□□ 0.44
CHMP1A-209ENST00000550872 BTG3Q14201 252 aaPredicted RBP17.8■□□□□ 0.44
CHMP1A-209ENST00000550872 PAN2Q504Q3 1202 aaKnown RBP17.8■□□□□ 0.44
CHMP1A-209ENST00000550872 FAM26FQ5R3K3 315 aa17.8■□□□□ 0.44
CHMP1A-209ENST00000550872 ZPBP2Q6X784 338 aa17.8■□□□□ 0.44
CHMP1A-209ENST00000550872 ABI1Q8IZP0 508 aa17.8■□□□□ 0.44
CHMP1A-209ENST00000550872 HPS3Q969F9 1004 aa17.8■□□□□ 0.44
CHMP1A-209ENST00000550872 TIGD1Q96MW7 591 aa17.8■□□□□ 0.44
CHMP1A-209ENST00000550872 APOL6Q9BWW8 343 aa17.8■□□□□ 0.44
CHMP1A-209ENST00000550872 TMEM117Q9H0C3 514 aa17.8■□□□□ 0.44
CHMP1A-209ENST00000550872 HES2Q9Y543 173 aa17.8■□□□□ 0.44
CHMP1A-209ENST00000550872 MEIS3P2A8K0S8 358 aa17.79■□□□□ 0.44
CHMP1A-209ENST00000550872 DLL1O00548 723 aa17.79■□□□□ 0.44
CHMP1A-209ENST00000550872 KLRC4O43908 158 aa17.79■□□□□ 0.44
CHMP1A-209ENST00000550872 KINO60870 393 aaKnown RBP17.79■□□□□ 0.44
CHMP1A-209ENST00000550872 MYBP10242 640 aa17.79■□□□□ 0.44
CHMP1A-209ENST00000550872 LIG4P49917 911 aa17.79■□□□□ 0.44
CHMP1A-209ENST00000550872 DCAF4L1Q3SXM0 396 aa17.79■□□□□ 0.44
CHMP1A-209ENST00000550872 ZNF568Q3ZCX4 644 aa17.79■□□□□ 0.44
CHMP1A-209ENST00000550872 PPP2R2DQ66LE6 453 aa17.79■□□□□ 0.44
CHMP1A-209ENST00000550872 AGMOQ6ZNB7 445 aa17.79■□□□□ 0.44
CHMP1A-209ENST00000550872 STXBP4Q6ZWJ1 553 aa17.79■□□□□ 0.44
CHMP1A-209ENST00000550872 Q7L0L9 218 aa17.79■□□□□ 0.44
CHMP1A-209ENST00000550872 ZBTB33Q86T24 672 aa17.79■□□□□ 0.44
CHMP1A-209ENST00000550872 MAP4K3Q8IVH8 894 aa17.79■□□□□ 0.44
CHMP1A-209ENST00000550872 CMTR2Q8IYT2 770 aaKnown RBP17.79■□□□□ 0.44
CHMP1A-209ENST00000550872 HACE1Q8IYU2 909 aa17.79■□□□□ 0.44
CHMP1A-209ENST00000550872 FIBCD1Q8N539 461 aa17.79■□□□□ 0.44
CHMP1A-209ENST00000550872 SP7Q8TDD2 431 aaPredicted RBP17.79■□□□□ 0.44
CHMP1A-209ENST00000550872 HELQQ8TDG4 1101 aa17.79■□□□□ 0.44
CHMP1A-209ENST00000550872 CCDC47Q96A33 483 aaKnown RBP17.79■□□□□ 0.44
CHMP1A-209ENST00000550872 HVCN1Q96D96 273 aa17.79■□□□□ 0.44
CHMP1A-209ENST00000550872 ZBTB45Q96K62 511 aaPredicted RBP17.79■□□□□ 0.44
CHMP1A-209ENST00000550872 ACCSQ96QU6 501 aa17.79■□□□□ 0.44
CHMP1A-209ENST00000550872 STRA6Q9BX79 667 aa17.79■□□□□ 0.44
CHMP1A-209ENST00000550872 FGFBP2Q9BYJ0 223 aa17.79■□□□□ 0.44
CHMP1A-209ENST00000550872 RNF39Q9H2S5 420 aa17.79■□□□□ 0.44
CHMP1A-209ENST00000550872 NXF3Q9H4D5 531 aaKnown RBP17.79■□□□□ 0.44
CHMP1A-209ENST00000550872 RC3H2Q9HBD1 1191 aaKnown RBP17.79■□□□□ 0.44
CHMP1A-209ENST00000550872 PTPRHQ9HD43 1115 aa17.79■□□□□ 0.44
CHMP1A-209ENST00000550872 RNF19AQ9NV58 838 aa17.79■□□□□ 0.44
CHMP1A-209ENST00000550872 EXOC1Q9NV70 894 aa17.79■□□□□ 0.44
CHMP1A-209ENST00000550872 EXOC7Q9UPT5 735 aa17.79■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms