RNA–Protein interactions for RNA: ENST00000550418.5

RBFOX1-212, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 1 (best) BASIC

Gene RBFOX1, Length 4,775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-212ENST00000550418 MAP2K7O14733 419 aa16.8■□□□□ 0.28
RBFOX1-212ENST00000550418 MED7O43513 233 aa16.8■□□□□ 0.28
RBFOX1-212ENST00000550418 PDHBP11177 359 aa16.8■□□□□ 0.28
RBFOX1-212ENST00000550418 ARL4AP40617 200 aa16.8■□□□□ 0.28
RBFOX1-212ENST00000550418 OCRLQ01968 901 aa16.8■□□□□ 0.28
RBFOX1-212ENST00000550418 DNAL1Q4LDG9 190 aa16.8■□□□□ 0.28
RBFOX1-212ENST00000550418 RHOT1Q8IXI2 618 aa16.8■□□□□ 0.28
RBFOX1-212ENST00000550418 COX16Q9P0S2 106 aa16.8■□□□□ 0.28
RBFOX1-212ENST00000550418 CCPG1Q9ULG6 757 aa16.8■□□□□ 0.28
RBFOX1-212ENST00000550418 ENO1P06733 434 aaKnown RBP16.8■□□□□ 0.28
RBFOX1-212ENST00000550418 ACADSP16219 412 aa16.8■□□□□ 0.28
RBFOX1-212ENST00000550418 BARGINQ6ZT62 677 aa16.8■□□□□ 0.28
RBFOX1-212ENST00000550418 ACAD11Q709F0 780 aa16.8■□□□□ 0.28
RBFOX1-212ENST00000550418 SPICE1Q8N0Z3 855 aa16.8■□□□□ 0.28
RBFOX1-212ENST00000550418 CEP170P1Q96L14 293 aa16.8■□□□□ 0.28
RBFOX1-212ENST00000550418 LACRTQ9GZZ8 138 aa16.8■□□□□ 0.28
RBFOX1-212ENST00000550418 KDM4CQ9H3R0 1056 aa16.8■□□□□ 0.28
RBFOX1-212ENST00000550418 ZFATQ9P243 1243 aa16.8■□□□□ 0.28
RBFOX1-212ENST00000550418 TRIM33Q9UPN9 1127 aa16.8■□□□□ 0.28
RBFOX1-212ENST00000550418 DUSP10Q9Y6W6 482 aa16.8■□□□□ 0.28
RBFOX1-212ENST00000550418 UCHL3P15374 230 aa16.79■□□□□ 0.28
RBFOX1-212ENST00000550418 CNGA3Q16281 694 aa16.79■□□□□ 0.28
RBFOX1-212ENST00000550418 SYDE1Q6ZW31 735 aaPredicted RBP16.79■□□□□ 0.28
RBFOX1-212ENST00000550418 MTBPQ96DY7 904 aa16.79■□□□□ 0.28
RBFOX1-212ENST00000550418 MRPL40Q9NQ50 206 aaKnown RBP16.79■□□□□ 0.28
RBFOX1-212ENST00000550418 PDP2Q9P2J9 529 aa16.79■□□□□ 0.28
RBFOX1-212ENST00000550418 LEMD3Q9Y2U8 911 aa16.79■□□□□ 0.28
RBFOX1-212ENST00000550418 ZC3H13Q5T200 1668 aaKnown RBP16.79■□□□□ 0.28
RBFOX1-212ENST00000550418 ZNF233A6NK53 670 aa16.79■□□□□ 0.28
RBFOX1-212ENST00000550418 RABL6Q3YEC7 729 aaPredicted RBP16.79■□□□□ 0.28
RBFOX1-212ENST00000550418 TSSK1BQ9BXA7 367 aa16.79■□□□□ 0.28
RBFOX1-212ENST00000550418 TRIM15Q9C019 465 aa16.79■□□□□ 0.28
RBFOX1-212ENST00000550418 CAPN6Q9Y6Q1 641 aa16.79■□□□□ 0.28
RBFOX1-212ENST00000550418 AK9Q5TCS8 1911 aa16.79■□□□□ 0.28
RBFOX1-212ENST00000550418 INPP1P49441 399 aa16.79■□□□□ 0.28
RBFOX1-212ENST00000550418 IFRD2Q12894 506 aaPredicted RBP16.79■□□□□ 0.28
RBFOX1-212ENST00000550418 TFDP2Q14188 446 aa16.79■□□□□ 0.28
RBFOX1-212ENST00000550418 GRM4Q14833 912 aa16.79■□□□□ 0.28
RBFOX1-212ENST00000550418 CATSPER1Q8NEC5 780 aa16.79■□□□□ 0.28
RBFOX1-212ENST00000550418 RBM15Q96T37 977 aaKnown RBP eCLIP16.79■□□□□ 0.28
RBFOX1-212ENST00000550418 SLC13A1Q9BZW2 595 aa16.79■□□□□ 0.28
RBFOX1-212ENST00000550418 NXF1Q9UBU9 619 aaKnown RBP16.79■□□□□ 0.28
RBFOX1-212ENST00000550418 PREX1Q8TCU6 1659 aa16.79■□□□□ 0.28
RBFOX1-212ENST00000550418 UBTFL6P0CB48 400 aaPredicted RBP16.78■□□□□ 0.28
RBFOX1-212ENST00000550418 CYLC2Q14093 348 aaPredicted RBP16.78■□□□□ 0.28
RBFOX1-212ENST00000550418 EZH2Q15910 746 aaKnown RBP16.78■□□□□ 0.28
RBFOX1-212ENST00000550418 C4orf33Q8N1A6 199 aa16.78■□□□□ 0.28
RBFOX1-212ENST00000550418 METTL13Q8N6R0 699 aa16.78■□□□□ 0.28
RBFOX1-212ENST00000550418 FAM149B1Q96BN6 582 aa16.78■□□□□ 0.28
RBFOX1-212ENST00000550418 AGPAT1Q99943 283 aa16.78■□□□□ 0.28
RBFOX1-212ENST00000550418 ING2Q9H160 280 aa16.78■□□□□ 0.28
RBFOX1-212ENST00000550418 PABPC3Q9H361 631 aaKnown RBP16.78■□□□□ 0.28
RBFOX1-212ENST00000550418 SEPT9Q9UHD8 586 aaPredicted RBP16.78■□□□□ 0.28
RBFOX1-212ENST00000550418 IPO11Q9UI26 975 aaKnown RBP16.78■□□□□ 0.28
RBFOX1-212ENST00000550418 IQSEC2Q5JU85 1478 aa16.78■□□□□ 0.28
RBFOX1-212ENST00000550418 AP3B2Q13367 1082 aa16.78■□□□□ 0.28
RBFOX1-212ENST00000550418 DAB2IPQ5VWQ8 1189 aa16.78■□□□□ 0.28
RBFOX1-212ENST00000550418 BZW1Q7L1Q6 419 aaKnown RBP16.78■□□□□ 0.28
RBFOX1-212ENST00000550418 COL23A1Q86Y22 540 aaPredicted RBP16.78■□□□□ 0.28
RBFOX1-212ENST00000550418 SRBD1Q8N5C6 995 aaKnown RBP16.78■□□□□ 0.28
RBFOX1-212ENST00000550418 KPNA7A9QM74 516 aa16.78■□□□□ 0.28
RBFOX1-212ENST00000550418 SRGAP2BP0DMP2 458 aa16.78■□□□□ 0.28
RBFOX1-212ENST00000550418 TFAMQ00059 246 aaKnown RBP16.78■□□□□ 0.28
RBFOX1-212ENST00000550418 KYNUQ16719 465 aa16.78■□□□□ 0.28
RBFOX1-212ENST00000550418 SMIM5Q71RC9 77 aa16.78■□□□□ 0.28
RBFOX1-212ENST00000550418 ATG9AQ7Z3C6 839 aa16.78■□□□□ 0.28
RBFOX1-212ENST00000550418 SLC7A3Q8WY07 619 aa16.78■□□□□ 0.28
RBFOX1-212ENST00000550418 CAVIN3Q969G5 261 aa16.78■□□□□ 0.28
RBFOX1-212ENST00000550418 THAP11Q96EK4 314 aa16.78■□□□□ 0.28
RBFOX1-212ENST00000550418 KCND1Q9NSA2 647 aa16.78■□□□□ 0.28
RBFOX1-212ENST00000550418 TMEM260Q9NX78 707 aa16.78■□□□□ 0.28
RBFOX1-212ENST00000550418 TNS3Q68CZ2 1445 aa16.78■□□□□ 0.28
RBFOX1-212ENST00000550418 PLEKP08567 350 aaPredicted RBP16.78■□□□□ 0.28
RBFOX1-212ENST00000550418 TRIM49P0CI25 452 aa16.78■□□□□ 0.28
RBFOX1-212ENST00000550418 TRIM49CP0CI26 452 aa16.78■□□□□ 0.28
RBFOX1-212ENST00000550418 OR6B2Q6IFH4 312 aa16.78■□□□□ 0.28
RBFOX1-212ENST00000550418 MARCH10Q8NA82 808 aaPredicted RBP16.78■□□□□ 0.28
RBFOX1-212ENST00000550418 CYTH1Q15438 398 aa16.77■□□□□ 0.28
RBFOX1-212ENST00000550418 CCDC117Q8IWD4 279 aaPredicted RBP16.77■□□□□ 0.28
RBFOX1-212ENST00000550418 TMEM35BQ8NCS4 154 aa16.77■□□□□ 0.28
RBFOX1-212ENST00000550418 MAGED2Q9UNF1 606 aaPredicted RBP16.77■□□□□ 0.28
RBFOX1-212ENST00000550418 HPS5Q9UPZ3 1129 aa16.77■□□□□ 0.28
RBFOX1-212ENST00000550418 NCAPD2Q15021 1401 aa16.77■□□□□ 0.28
RBFOX1-212ENST00000550418 VWDEQ8N2E2 1590 aa16.77■□□□□ 0.28
RBFOX1-212ENST00000550418 POTEFA5A3E0 1075 aa16.77■□□□□ 0.28
RBFOX1-212ENST00000550418 ERVV-1B6SEH8 477 aa16.77■□□□□ 0.28
RBFOX1-212ENST00000550418 KCNQ2O43526 872 aa16.77■□□□□ 0.28
RBFOX1-212ENST00000550418 TDP2O95551 362 aa16.77■□□□□ 0.28
RBFOX1-212ENST00000550418 POTEIP0CG38 1075 aa16.77■□□□□ 0.28
RBFOX1-212ENST00000550418 POTEGQ6S5H5 508 aa16.77■□□□□ 0.28
RBFOX1-212ENST00000550418 POTEEQ6S8J3 1075 aa16.77■□□□□ 0.28
RBFOX1-212ENST00000550418 NAF1Q96HR8 494 aaKnown RBP16.77■□□□□ 0.28
RBFOX1-212ENST00000550418 ANKRD36BP1Q96IX9 119 aa16.77■□□□□ 0.28
RBFOX1-212ENST00000550418 ADPGKQ9BRR6 497 aa16.77■□□□□ 0.28
RBFOX1-212ENST00000550418 VPS11Q9H270 941 aa16.77■□□□□ 0.28
RBFOX1-212ENST00000550418 MAGEA13PA6NCF6 341 aa16.77■□□□□ 0.27
RBFOX1-212ENST00000550418 GOLGA8RI6L899 631 aa16.77■□□□□ 0.27
RBFOX1-212ENST00000550418 PDXKO00764 312 aa16.77■□□□□ 0.27
RBFOX1-212ENST00000550418 SORBS3O60504 671 aa16.77■□□□□ 0.27
RBFOX1-212ENST00000550418 BMP3P12645 472 aa16.77■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms