RNA–Protein interactions for RNA: ENST00000550219.1

NUP188-211, Transcript of nucleoporin 188, humanhuman

TSL 1 (best)

Gene NUP188, Length 886 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-211ENST00000550219 FAM173BQ6P4H8 233 aa14.89□□□□□ -0.03
NUP188-211ENST00000550219 DDX53Q86TM3 631 aaKnown RBP14.89□□□□□ -0.03
NUP188-211ENST00000550219 ZNF280BQ86YH2 543 aa14.89□□□□□ -0.03
NUP188-211ENST00000550219 SUGP1Q8IWZ8 645 aaKnown RBP14.89□□□□□ -0.03
NUP188-211ENST00000550219 C12orf76Q8N812 135 aaPredicted RBP14.89□□□□□ -0.03
NUP188-211ENST00000550219 PBXIP1Q96AQ6 731 aa14.89□□□□□ -0.03
NUP188-211ENST00000550219 CPB2Q96IY4 423 aa14.89□□□□□ -0.03
NUP188-211ENST00000550219 APOL6Q9BWW8 343 aa14.89□□□□□ -0.03
NUP188-211ENST00000550219 POMKQ9H5K3 350 aa14.89□□□□□ -0.03
NUP188-211ENST00000550219 TTC12Q9H892 705 aaPredicted RBP14.89□□□□□ -0.03
NUP188-211ENST00000550219 XPNPEP1Q9NQW7 623 aa14.89□□□□□ -0.03
NUP188-211ENST00000550219 NOL7Q9UMY1 257 aaKnown RBP14.89□□□□□ -0.03
NUP188-211ENST00000550219 PCDHA12Q9UN75 941 aa14.89□□□□□ -0.03
NUP188-211ENST00000550219 ATP6V1DQ9Y5K8 247 aa14.89□□□□□ -0.03
NUP188-211ENST00000550219 POTEMA6NI47 508 aa14.88□□□□□ -0.03
NUP188-211ENST00000550219 TSPAN1O60635 241 aa14.88□□□□□ -0.03
NUP188-211ENST00000550219 USO1O60763 962 aaKnown RBP14.88□□□□□ -0.03
NUP188-211ENST00000550219 DDHD2O94830 711 aa14.88□□□□□ -0.03
NUP188-211ENST00000550219 ORC2Q13416 577 aaPredicted RBP14.88□□□□□ -0.03
NUP188-211ENST00000550219 TFDP1Q14186 410 aa14.88□□□□□ -0.03
NUP188-211ENST00000550219 PTPN21Q16825 1174 aa14.88□□□□□ -0.03
NUP188-211ENST00000550219 KANK3Q6NY19 840 aa14.88□□□□□ -0.03
NUP188-211ENST00000550219 ASAP3Q8TDY4 903 aa14.88□□□□□ -0.03
NUP188-211ENST00000550219 VN1R3Q9BXE9 311 aa14.88□□□□□ -0.03
NUP188-211ENST00000550219 EIF2AQ9BY44 585 aaKnown RBP14.88□□□□□ -0.03
NUP188-211ENST00000550219 EIF4ENIF1Q9NRA8 985 aaKnown RBP14.88□□□□□ -0.03
NUP188-211ENST00000550219 DZANK1Q9NVP4 752 aa14.88□□□□□ -0.03
NUP188-211ENST00000550219 PRG3Q9Y2Y8 225 aaPredicted RBP14.88□□□□□ -0.03
NUP188-211ENST00000550219 NR2E1Q9Y466 385 aa14.88□□□□□ -0.03
NUP188-211ENST00000550219 CNTNAP2Q9UHC6 1331 aa14.88□□□□□ -0.03
NUP188-211ENST00000550219 A0A087WWV3 80 aa14.87□□□□□ -0.03
NUP188-211ENST00000550219 CARNS1A5YM72 827 aa14.87□□□□□ -0.03
NUP188-211ENST00000550219 C2CD4DB7Z1M9 353 aa14.87□□□□□ -0.03
NUP188-211ENST00000550219 ASAP2O43150 1006 aa14.87□□□□□ -0.03
NUP188-211ENST00000550219 SLITRK3O94933 977 aa14.87□□□□□ -0.03
NUP188-211ENST00000550219 ITGA4P13612 1032 aa14.87□□□□□ -0.03
NUP188-211ENST00000550219 HOXA11P31270 313 aaPredicted RBP14.87□□□□□ -0.03
NUP188-211ENST00000550219 MLH1P40692 756 aa14.87□□□□□ -0.03
NUP188-211ENST00000550219 SIGLEC14Q08ET2 396 aa14.87□□□□□ -0.03
NUP188-211ENST00000550219 CAPSQ13938 189 aa14.87□□□□□ -0.03
NUP188-211ENST00000550219 MXD4Q14582 209 aaPredicted RBP14.87□□□□□ -0.03
NUP188-211ENST00000550219 PTPN14Q15678 1187 aa14.87□□□□□ -0.03
NUP188-211ENST00000550219 TTC38Q5R3I4 469 aa14.87□□□□□ -0.03
NUP188-211ENST00000550219 NOTUMQ6P988 496 aa14.87□□□□□ -0.03
NUP188-211ENST00000550219 MAEAQ7L5Y9 396 aa14.87□□□□□ -0.03
NUP188-211ENST00000550219 ALYREFQ86V81 257 aaKnown RBP14.87□□□□□ -0.03
NUP188-211ENST00000550219 PIGOQ8TEQ8 1089 aa14.87□□□□□ -0.03
NUP188-211ENST00000550219 RIPOR3Q96MK2 946 aa14.87□□□□□ -0.03
NUP188-211ENST00000550219 ZNF396Q96N95 335 aaPredicted RBP14.87□□□□□ -0.03
NUP188-211ENST00000550219 NECTIN4Q96NY8 510 aa14.87□□□□□ -0.03
NUP188-211ENST00000550219 POLR3FQ9H1D9 316 aaPredicted RBP14.87□□□□□ -0.03
NUP188-211ENST00000550219 ADAM7Q9H2U9 754 aa14.87□□□□□ -0.03
NUP188-211ENST00000550219 HES2Q9Y543 173 aa14.87□□□□□ -0.03
NUP188-211ENST00000550219 IPPQ9Y573 584 aa14.87□□□□□ -0.03
NUP188-211ENST00000550219 C2CD2LO14523 706 aa14.86□□□□□ -0.03
NUP188-211ENST00000550219 NCLP19338 710 aaKnown RBP14.86□□□□□ -0.03
NUP188-211ENST00000550219 MCM7P33993 719 aa14.86□□□□□ -0.03
NUP188-211ENST00000550219 MTHFRP42898 656 aa14.86□□□□□ -0.03
NUP188-211ENST00000550219 OR1G1P47890 313 aa14.86□□□□□ -0.03
NUP188-211ENST00000550219 NASPP49321 788 aaPredicted RBP14.86□□□□□ -0.03
NUP188-211ENST00000550219 PTENP60484 403 aa14.86□□□□□ -0.03
NUP188-211ENST00000550219 NHLH1Q02575 133 aa14.86□□□□□ -0.03
NUP188-211ENST00000550219 DNM1Q05193 864 aaKnown RBP14.86□□□□□ -0.03
NUP188-211ENST00000550219 ITIH3Q06033 890 aa14.86□□□□□ -0.03
NUP188-211ENST00000550219 NCBP1Q09161 790 aaKnown RBP14.86□□□□□ -0.03
NUP188-211ENST00000550219 GIT2Q14161 759 aa14.86□□□□□ -0.03
NUP188-211ENST00000550219 NBR1Q14596 966 aa14.86□□□□□ -0.03
NUP188-211ENST00000550219 CLEC17AQ6ZS10 378 aa14.86□□□□□ -0.03
NUP188-211ENST00000550219 MRPL10Q7Z7H8 261 aaKnown RBP14.86□□□□□ -0.03
NUP188-211ENST00000550219 CABP7Q86V35 215 aa14.86□□□□□ -0.03
NUP188-211ENST00000550219 CDR2LQ86X02 465 aaPredicted RBP14.86□□□□□ -0.03
NUP188-211ENST00000550219 C4orf32Q8N8J7 132 aa14.86□□□□□ -0.03
NUP188-211ENST00000550219 TDRD5Q8NAT2 981 aaKnown RBP14.86□□□□□ -0.03
NUP188-211ENST00000550219 SMG8Q8ND04 991 aaKnown RBP14.86□□□□□ -0.03
NUP188-211ENST00000550219 USP28Q96RU2 1077 aa14.86□□□□□ -0.03
NUP188-211ENST00000550219 GAD1Q99259 594 aa14.86□□□□□ -0.03
NUP188-211ENST00000550219 EMILIN2Q9BXX0 1053 aa14.86□□□□□ -0.03
NUP188-211ENST00000550219 TRIM6Q9C030 488 aaPredicted RBP14.86□□□□□ -0.03
NUP188-211ENST00000550219 ANKEF1Q9NU02 776 aa14.86□□□□□ -0.03
NUP188-211ENST00000550219 KANSL3Q9P2N6 904 aa14.86□□□□□ -0.03
NUP188-211ENST00000550219 DBR1Q9UK59 544 aaKnown RBP14.86□□□□□ -0.03
NUP188-211ENST00000550219 FAN1Q9Y2M0 1017 aa14.86□□□□□ -0.03
NUP188-211ENST00000550219 PCDHB6Q9Y5E3 794 aa14.86□□□□□ -0.03
NUP188-211ENST00000550219 MORC2Q9Y6X9 1032 aaPredicted RBP14.86□□□□□ -0.03
NUP188-211ENST00000550219 LRRIQ4A6NIV6 560 aa14.85□□□□□ -0.03
NUP188-211ENST00000550219 NRP1O14786 923 aa14.85□□□□□ -0.03
NUP188-211ENST00000550219 DGAT1O75907 488 aa14.85□□□□□ -0.03
NUP188-211ENST00000550219 URODP06132 367 aa14.85□□□□□ -0.03
NUP188-211ENST00000550219 GLRA2P23416 452 aa14.85□□□□□ -0.03
NUP188-211ENST00000550219 KLRC2P26717 231 aa14.85□□□□□ -0.03
NUP188-211ENST00000550219 RARRES1P49788 294 aa14.85□□□□□ -0.03
NUP188-211ENST00000550219 SCNN1GP51170 649 aa14.85□□□□□ -0.03
NUP188-211ENST00000550219 MBTD1Q05BQ5 628 aa14.85□□□□□ -0.03
NUP188-211ENST00000550219 ZNF174Q15697 407 aa14.85□□□□□ -0.03
NUP188-211ENST00000550219 KIAA1841Q6NSI8 718 aa14.85□□□□□ -0.03
NUP188-211ENST00000550219 TMC5Q6UXY8 1006 aa14.85□□□□□ -0.03
NUP188-211ENST00000550219 KREMEN2Q8NCW0 462 aa14.85□□□□□ -0.03
NUP188-211ENST00000550219 CNNM3Q8NE01 707 aa14.85□□□□□ -0.03
NUP188-211ENST00000550219 FEZF2Q8TBJ5 459 aa14.85□□□□□ -0.03
NUP188-211ENST00000550219 SLC22A17Q8WUG5 538 aa14.85□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms