RNA–Protein interactions for RNA: ENST00000550009.1

COX6A1-203, Transcript of cytochrome c oxidase subunit 6A1, humanhuman

TSL 2

Gene COX6A1, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COX6A1-203ENST00000550009 SCNN1GP51170 649 aa17.67■□□□□ 0.42
COX6A1-203ENST00000550009 MXD4Q14582 209 aaPredicted RBP17.67■□□□□ 0.42
COX6A1-203ENST00000550009 SMC1AQ14683 1233 aaKnown RBP17.67■□□□□ 0.42
COX6A1-203ENST00000550009 TMEM184AQ6ZMB5 413 aa17.67■□□□□ 0.42
COX6A1-203ENST00000550009 GSTCDQ8NEC7 633 aa17.67■□□□□ 0.42
COX6A1-203ENST00000550009 TMEM169Q96HH4 297 aa17.67■□□□□ 0.42
COX6A1-203ENST00000550009 POLR3CQ9BUI4 534 aaPredicted RBP17.67■□□□□ 0.42
COX6A1-203ENST00000550009 CSRNP2Q9H175 543 aa17.67■□□□□ 0.42
COX6A1-203ENST00000550009 TUFT1Q9NNX1 390 aa17.67■□□□□ 0.42
COX6A1-203ENST00000550009 NGRNQ9NPE2 291 aaKnown RBP17.67■□□□□ 0.42
COX6A1-203ENST00000550009 FAM50BQ9Y247 325 aa17.67■□□□□ 0.42
COX6A1-203ENST00000550009 PRG3Q9Y2Y8 225 aaPredicted RBP17.67■□□□□ 0.42
COX6A1-203ENST00000550009 CITO14578 2027 aa17.66■□□□□ 0.42
COX6A1-203ENST00000550009 ITGA4P13612 1032 aa17.66■□□□□ 0.42
COX6A1-203ENST00000550009 U2AF2P26368 475 aaKnown RBP eCLIP17.66■□□□□ 0.42
COX6A1-203ENST00000550009 RPA1P27694 616 aa17.66■□□□□ 0.42
COX6A1-203ENST00000550009 HMGN5P82970 282 aaKnown RBP17.66■□□□□ 0.42
COX6A1-203ENST00000550009 PTGDRQ13258 359 aa17.66■□□□□ 0.42
COX6A1-203ENST00000550009 PDE12Q6L8Q7 609 aaKnown RBP17.66■□□□□ 0.42
COX6A1-203ENST00000550009 PADI6Q6TGC4 694 aa17.66■□□□□ 0.42
COX6A1-203ENST00000550009 DDX53Q86TM3 631 aaKnown RBP17.66■□□□□ 0.42
COX6A1-203ENST00000550009 EXOC8Q8IYI6 725 aa17.66■□□□□ 0.42
COX6A1-203ENST00000550009 COLGALT2Q8IYK4 626 aa17.66■□□□□ 0.42
COX6A1-203ENST00000550009 PGBD4Q96DM1 585 aa17.66■□□□□ 0.42
COX6A1-203ENST00000550009 TMX3Q96JJ7 454 aa17.66■□□□□ 0.42
COX6A1-203ENST00000550009 B3GALT6Q96L58 329 aa17.66■□□□□ 0.42
COX6A1-203ENST00000550009 CCDC43Q96MW1 224 aaKnown RBP17.66■□□□□ 0.42
COX6A1-203ENST00000550009 CDCA3Q99618 268 aaPredicted RBP17.66■□□□□ 0.42
COX6A1-203ENST00000550009 PDCD11Q14690 1871 aaKnown RBP17.65■□□□□ 0.42
COX6A1-203ENST00000550009 KMT2EQ8IZD2 1858 aa17.65■□□□□ 0.42
COX6A1-203ENST00000550009 CTSAP10619 480 aa17.65■□□□□ 0.42
COX6A1-203ENST00000550009 LIG1P18858 919 aa17.65■□□□□ 0.42
COX6A1-203ENST00000550009 IGFBP6P24592 240 aaPredicted RBP17.65■□□□□ 0.42
COX6A1-203ENST00000550009 GNL2Q13823 731 aaKnown RBP17.65■□□□□ 0.42
COX6A1-203ENST00000550009 TFDP1Q14186 410 aa17.65■□□□□ 0.42
COX6A1-203ENST00000550009 EEF1DP3Q658K8 133 aa17.65■□□□□ 0.42
COX6A1-203ENST00000550009 NOTUMQ6P988 496 aa17.65■□□□□ 0.42
COX6A1-203ENST00000550009 KCNK18Q7Z418 384 aa17.65■□□□□ 0.42
COX6A1-203ENST00000550009 URGCPQ8TCY9 931 aa17.65■□□□□ 0.42
COX6A1-203ENST00000550009 SLC22A17Q8WUG5 538 aa17.65■□□□□ 0.42
COX6A1-203ENST00000550009 PAAF1Q9BRP4 392 aa17.65■□□□□ 0.42
COX6A1-203ENST00000550009 MMTAG2Q9BU76 263 aaKnown RBP17.65■□□□□ 0.42
COX6A1-203ENST00000550009 DBR1Q9UK59 544 aaKnown RBP17.65■□□□□ 0.42
COX6A1-203ENST00000550009 DOCK8Q8NF50 2099 aa17.64■□□□□ 0.41
COX6A1-203ENST00000550009 E9PMD0 336 aa17.64■□□□□ 0.41
COX6A1-203ENST00000550009 C2CD2LO14523 706 aa17.64■□□□□ 0.41
COX6A1-203ENST00000550009 CCT6AP40227 531 aaKnown RBP17.64■□□□□ 0.41
COX6A1-203ENST00000550009 RABEP1Q15276 862 aa17.64■□□□□ 0.41
COX6A1-203ENST00000550009 PTPN14Q15678 1187 aa17.64■□□□□ 0.41
COX6A1-203ENST00000550009 RARS2Q5T160 578 aaKnown RBP17.64■□□□□ 0.41
COX6A1-203ENST00000550009 CDCA2Q69YH5 1023 aaPredicted RBP17.64■□□□□ 0.41
COX6A1-203ENST00000550009 NACC1Q96RE7 527 aa17.64■□□□□ 0.41
COX6A1-203ENST00000550009 PHF7Q9BWX1 381 aaPredicted RBP17.64■□□□□ 0.41
COX6A1-203ENST00000550009 POMKQ9H5K3 350 aa17.64■□□□□ 0.41
COX6A1-203ENST00000550009 DDX19AQ9NUU7 478 aaKnown RBP17.64■□□□□ 0.41
COX6A1-203ENST00000550009 KIAA1024Q9UPX6 916 aa17.64■□□□□ 0.41
COX6A1-203ENST00000550009 FAN1Q9Y2M0 1017 aa17.64■□□□□ 0.41
COX6A1-203ENST00000550009 EIF5BO60841 1220 aaKnown RBP17.63■□□□□ 0.41
COX6A1-203ENST00000550009 LILRB3O75022 631 aa17.63■□□□□ 0.41
COX6A1-203ENST00000550009 XRCC6P12956 609 aaKnown RBP eCLIP17.63■□□□□ 0.41
COX6A1-203ENST00000550009 GJB2P29033 226 aa17.63■□□□□ 0.41
COX6A1-203ENST00000550009 OR1G1P47890 313 aa17.63■□□□□ 0.41
COX6A1-203ENST00000550009 FXR2P51116 673 aaKnown RBP eCLIP17.63■□□□□ 0.41
COX6A1-203ENST00000550009 POU5F1BQ06416 359 aa17.63■□□□□ 0.41
COX6A1-203ENST00000550009 DSC1Q08554 894 aa17.63■□□□□ 0.41
COX6A1-203ENST00000550009 CBX2Q14781 532 aaPredicted RBP17.63■□□□□ 0.41
COX6A1-203ENST00000550009 MCTP1Q6DN14 999 aa17.63■□□□□ 0.41
COX6A1-203ENST00000550009 HFE2Q6ZVN8 426 aa17.63■□□□□ 0.41
COX6A1-203ENST00000550009 NFKBIZQ9BYH8 718 aa17.63■□□□□ 0.41
COX6A1-203ENST00000550009 CCDC113Q9H0I3 377 aa17.63■□□□□ 0.41
COX6A1-203ENST00000550009 BHMT2Q9H2M3 363 aa17.63■□□□□ 0.41
COX6A1-203ENST00000550009 SMOC2Q9H3U7 446 aa17.63■□□□□ 0.41
COX6A1-203ENST00000550009 PDZD7Q9H5P4 517 aa17.63■□□□□ 0.41
COX6A1-203ENST00000550009 CNTNAP2Q9UHC6 1331 aa17.63■□□□□ 0.41
COX6A1-203ENST00000550009 A0A1B0GUA9 196 aa17.62■□□□□ 0.41
COX6A1-203ENST00000550009 ARHGEF35A5YM69 484 aa17.62■□□□□ 0.41
COX6A1-203ENST00000550009 EFEMP2O95967 443 aa17.62■□□□□ 0.41
COX6A1-203ENST00000550009 CNPP09543 421 aaKnown RBP17.62■□□□□ 0.41
COX6A1-203ENST00000550009 ALADP13716 330 aa17.62■□□□□ 0.41
COX6A1-203ENST00000550009 CYP11B2P19099 503 aa17.62■□□□□ 0.41
COX6A1-203ENST00000550009 AXLP30530 894 aa17.62■□□□□ 0.41
COX6A1-203ENST00000550009 HERC4Q5GLZ8 1057 aaPredicted RBP17.62■□□□□ 0.41
COX6A1-203ENST00000550009 IGSF22Q8N9C0 903 aa17.62■□□□□ 0.41
COX6A1-203ENST00000550009 FAM193BQ96PV7 902 aaPredicted RBP17.62■□□□□ 0.41
COX6A1-203ENST00000550009 PLIN2Q99541 437 aa17.62■□□□□ 0.41
COX6A1-203ENST00000550009 FZD8Q9H461 694 aa17.62■□□□□ 0.41
COX6A1-203ENST00000550009 EIF4ENIF1Q9NRA8 985 aaKnown RBP17.62■□□□□ 0.41
COX6A1-203ENST00000550009 LRWD1Q9UFC0 647 aa17.62■□□□□ 0.41
COX6A1-203ENST00000550009 PARP2Q9UGN5 583 aa17.62■□□□□ 0.41
COX6A1-203ENST00000550009 ANK1P16157 1881 aa17.62■□□□□ 0.41
COX6A1-203ENST00000550009 PRR33A8MZF0 331 aa17.61■□□□□ 0.41
COX6A1-203ENST00000550009 INPPL1O15357 1258 aa17.61■□□□□ 0.41
COX6A1-203ENST00000550009 ALDH2P05091 517 aa17.61■□□□□ 0.41
COX6A1-203ENST00000550009 NT5DC1Q5TFE4 455 aa17.61■□□□□ 0.41
COX6A1-203ENST00000550009 SLC27A1Q6PCB7 646 aa17.61■□□□□ 0.41
COX6A1-203ENST00000550009 DAW1Q8N136 415 aa17.61■□□□□ 0.41
COX6A1-203ENST00000550009 TMEM130Q8N3G9 435 aa17.61■□□□□ 0.41
COX6A1-203ENST00000550009 SNX29Q8TEQ0 813 aa17.61■□□□□ 0.41
COX6A1-203ENST00000550009 HASPINQ8TF76 798 aa17.61■□□□□ 0.41
COX6A1-203ENST00000550009 CASP10Q92851 521 aa17.61■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms