RNA–Protein interactions for RNA: ENST00000549750.5

CNOT2-220, Transcript of CCR4-NOT transcription complex subunit 2, humanhuman

TSL 5

Gene CNOT2, Length 1,085 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT2-220ENST00000549750 ORC2Q13416 577 aaPredicted RBP15.23■□□□□ 0.03
CNOT2-220ENST00000549750 TMEM173Q86WV6 379 aaPredicted RBP15.23■□□□□ 0.03
CNOT2-220ENST00000549750 TPH2Q8IWU9 490 aa15.23■□□□□ 0.03
CNOT2-220ENST00000549750 TMEM175Q9BSA9 504 aa15.23■□□□□ 0.03
CNOT2-220ENST00000549750 MFSD1Q9H3U5 465 aa15.23■□□□□ 0.03
CNOT2-220ENST00000549750 TSHZ2Q9NRE2 1034 aa15.23■□□□□ 0.03
CNOT2-220ENST00000549750 KANSL3Q9P2N6 904 aa15.23■□□□□ 0.03
CNOT2-220ENST00000549750 HCFC2Q9Y5Z7 792 aa15.23■□□□□ 0.03
CNOT2-220ENST00000549750 ACACBO00763 2458 aa15.23■□□□□ 0.03
CNOT2-220ENST00000549750 CEP250Q9BV73 2442 aa15.23■□□□□ 0.03
CNOT2-220ENST00000549750 NT5C1B-RDH14C9J2C7 533 aa15.22■□□□□ 0.03
CNOT2-220ENST00000549750 CLASP2O75122 1294 aaKnown RBP15.22■□□□□ 0.03
CNOT2-220ENST00000549750 ZC3H11AO75152 810 aaKnown RBP eCLIP15.22■□□□□ 0.03
CNOT2-220ENST00000549750 SEC24BO95487 1268 aa15.22■□□□□ 0.03
CNOT2-220ENST00000549750 ARL2P36404 184 aa15.22■□□□□ 0.03
CNOT2-220ENST00000549750 RARRES1P49788 294 aa15.22■□□□□ 0.03
CNOT2-220ENST00000549750 TFDP1Q14186 410 aa15.22■□□□□ 0.03
CNOT2-220ENST00000549750 URGCPQ8TCY9 931 aa15.22■□□□□ 0.03
CNOT2-220ENST00000549750 RMDN1Q96DB5 314 aa15.22■□□□□ 0.03
CNOT2-220ENST00000549750 LLPHQ9BRT6 129 aaKnown RBP15.22■□□□□ 0.03
CNOT2-220ENST00000549750 APOL5Q9BWW9 433 aa15.22■□□□□ 0.03
CNOT2-220ENST00000549750 RSAD1Q9HA92 442 aa15.22■□□□□ 0.03
CNOT2-220ENST00000549750 UBN1Q9NPG3 1134 aa15.22■□□□□ 0.03
CNOT2-220ENST00000549750 LIMCH1Q9UPQ0 1083 aa15.22■□□□□ 0.03
CNOT2-220ENST00000549750 TSPAN1O60635 241 aa15.21■□□□□ 0.03
CNOT2-220ENST00000549750 KRT37O76014 449 aa15.21■□□□□ 0.03
CNOT2-220ENST00000549750 ERLIN2O94905 339 aa15.21■□□□□ 0.03
CNOT2-220ENST00000549750 TXKP42681 527 aa15.21■□□□□ 0.03
CNOT2-220ENST00000549750 ITIH3Q06033 890 aa15.21■□□□□ 0.03
CNOT2-220ENST00000549750 TPRNQ4KMQ1 711 aa15.21■□□□□ 0.03
CNOT2-220ENST00000549750 VPS52Q8N1B4 723 aa15.21■□□□□ 0.03
CNOT2-220ENST00000549750 BCL7CQ8WUZ0 217 aaPredicted RBP15.21■□□□□ 0.03
CNOT2-220ENST00000549750 NECTIN4Q96NY8 510 aa15.21■□□□□ 0.03
CNOT2-220ENST00000549750 BMP2KQ9NSY1 1161 aaPredicted RBP15.21■□□□□ 0.03
CNOT2-220ENST00000549750 DNAJB4Q9UDY4 337 aa15.21■□□□□ 0.03
CNOT2-220ENST00000549750 INPP5FQ9Y2H2 1132 aa15.21■□□□□ 0.03
CNOT2-220ENST00000549750 ZMYM2Q9UBW7 1377 aa15.21■□□□□ 0.02
CNOT2-220ENST00000549750 B4GALT3O60512 393 aa15.2■□□□□ 0.02
CNOT2-220ENST00000549750 CXCL14O95715 111 aa15.2■□□□□ 0.02
CNOT2-220ENST00000549750 SPATA31C1P0DKV0 1188 aa15.2■□□□□ 0.02
CNOT2-220ENST00000549750 SLC11A1P49279 550 aa15.2■□□□□ 0.02
CNOT2-220ENST00000549750 RNASELQ05823 741 aaKnown RBP15.2■□□□□ 0.02
CNOT2-220ENST00000549750 MBTD1Q05BQ5 628 aa15.2■□□□□ 0.02
CNOT2-220ENST00000549750 CAPSQ13938 189 aa15.2■□□□□ 0.02
CNOT2-220ENST00000549750 SAFBQ15424 915 aaKnown RBP eCLIP15.2■□□□□ 0.02
CNOT2-220ENST00000549750 AMHR2Q16671 573 aa15.2■□□□□ 0.02
CNOT2-220ENST00000549750 NOTUMQ6P988 496 aa15.2■□□□□ 0.02
CNOT2-220ENST00000549750 ZNF280BQ86YH2 543 aa15.2■□□□□ 0.02
CNOT2-220ENST00000549750 SMG8Q8ND04 991 aaKnown RBP15.2■□□□□ 0.02
CNOT2-220ENST00000549750 ASAP3Q8TDY4 903 aa15.2■□□□□ 0.02
CNOT2-220ENST00000549750 VN1R3Q9BXE9 311 aa15.2■□□□□ 0.02
CNOT2-220ENST00000549750 TMEM60Q9H2L4 133 aa15.2■□□□□ 0.02
CNOT2-220ENST00000549750 ADAM7Q9H2U9 754 aa15.2■□□□□ 0.02
CNOT2-220ENST00000549750 FOXP1Q9H334 677 aaPredicted RBP15.2■□□□□ 0.02
CNOT2-220ENST00000549750 TUFT1Q9NNX1 390 aa15.2■□□□□ 0.02
CNOT2-220ENST00000549750 DZANK1Q9NVP4 752 aa15.2■□□□□ 0.02
CNOT2-220ENST00000549750 POTEMA6NI47 508 aa15.19■□□□□ 0.02
CNOT2-220ENST00000549750 C2CD4DB7Z1M9 353 aa15.19■□□□□ 0.02
CNOT2-220ENST00000549750 DDHD2O94830 711 aa15.19■□□□□ 0.02
CNOT2-220ENST00000549750 GLRA2P23416 452 aa15.19■□□□□ 0.02
CNOT2-220ENST00000549750 NCBP1Q09161 790 aaKnown RBP15.19■□□□□ 0.02
CNOT2-220ENST00000549750 PTPN14Q15678 1187 aa15.19■□□□□ 0.02
CNOT2-220ENST00000549750 LONRF3Q496Y0 759 aa15.19■□□□□ 0.02
CNOT2-220ENST00000549750 LLGL2Q6P1M3 1020 aa15.19■□□□□ 0.02
CNOT2-220ENST00000549750 PPFIBP1Q86W92 1011 aa15.19■□□□□ 0.02
CNOT2-220ENST00000549750 KCNG4Q8TDN1 519 aa15.19■□□□□ 0.02
CNOT2-220ENST00000549750 SLC22A17Q8WUG5 538 aa15.19■□□□□ 0.02
CNOT2-220ENST00000549750 POLR3CQ9BUI4 534 aaPredicted RBP15.19■□□□□ 0.02
CNOT2-220ENST00000549750 CSRNP2Q9H175 543 aa15.19■□□□□ 0.02
CNOT2-220ENST00000549750 SMOC2Q9H3U7 446 aa15.19■□□□□ 0.02
CNOT2-220ENST00000549750 DBR1Q9UK59 544 aaKnown RBP15.19■□□□□ 0.02
CNOT2-220ENST00000549750 IPPQ9Y573 584 aa15.19■□□□□ 0.02
CNOT2-220ENST00000549750 KMT2BQ9UMN6 2715 aaPredicted RBP15.18■□□□□ 0.02
CNOT2-220ENST00000549750 SPTBN2O15020 2390 aa15.18■□□□□ 0.02
CNOT2-220ENST00000549750 TDRD15B5MCY1 1934 aaKnown RBP15.18■□□□□ 0.02
CNOT2-220ENST00000549750 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP15.18■□□□□ 0.02
CNOT2-220ENST00000549750 INO80B-WBP1J3KQ70 363 aa15.18■□□□□ 0.02
CNOT2-220ENST00000549750 LILRB3O75022 631 aa15.18■□□□□ 0.02
CNOT2-220ENST00000549750 EFEMP2O95967 443 aa15.18■□□□□ 0.02
CNOT2-220ENST00000549750 ALDH2P05091 517 aa15.18■□□□□ 0.02
CNOT2-220ENST00000549750 ITGA4P13612 1032 aa15.18■□□□□ 0.02
CNOT2-220ENST00000549750 MUTP22033 750 aa15.18■□□□□ 0.02
CNOT2-220ENST00000549750 TRAPPC10P48553 1259 aa15.18■□□□□ 0.02
CNOT2-220ENST00000549750 AFF1P51825 1210 aaKnown RBP15.18■□□□□ 0.02
CNOT2-220ENST00000549750 HMGN5P82970 282 aaKnown RBP15.18■□□□□ 0.02
CNOT2-220ENST00000549750 DSC1Q08554 894 aa15.18■□□□□ 0.02
CNOT2-220ENST00000549750 PUM1Q14671 1186 aaKnown RBP eCLIP15.18■□□□□ 0.02
CNOT2-220ENST00000549750 CES5AQ6NT32 575 aa15.18■□□□□ 0.02
CNOT2-220ENST00000549750 CATSPER3Q86XQ3 398 aa15.18■□□□□ 0.02
CNOT2-220ENST00000549750 RNF168Q8IYW5 571 aaPredicted RBP15.18■□□□□ 0.02
CNOT2-220ENST00000549750 MCPH1Q8NEM0 835 aa15.18■□□□□ 0.02
CNOT2-220ENST00000549750 FBXO18Q8NFZ0 1043 aa15.18■□□□□ 0.02
CNOT2-220ENST00000549750 C8orf76Q96K31 380 aa15.18■□□□□ 0.02
CNOT2-220ENST00000549750 ZSCAN31Q96LW9 406 aaPredicted RBP15.18■□□□□ 0.02
CNOT2-220ENST00000549750 CCDC43Q96MW1 224 aaKnown RBP15.18■□□□□ 0.02
CNOT2-220ENST00000549750 SEMA4AQ9H3S1 761 aa15.18■□□□□ 0.02
CNOT2-220ENST00000549750 SH2B1Q9NRF2 756 aaPredicted RBP15.18■□□□□ 0.02
CNOT2-220ENST00000549750 DAXXQ9UER7 740 aaPredicted RBP15.18■□□□□ 0.02
CNOT2-220ENST00000549750 DENND4AQ7Z401 1863 aa15.18■□□□□ 0.02
CNOT2-220ENST00000549750 A0A1B0GUA9 196 aa15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms