RNA–Protein interactions for RNA: ENST00000549505.5

RAB5B-206, Transcript of RAB5B, member RAS oncogene family, humanhuman

TSL 1 (best)

Gene RAB5B, Length 3,148 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-206ENST00000549505 NOCTQ9UK39 431 aaKnown RBP10.83□□□□□ -0.68
RAB5B-206ENST00000549505 L1RE1Q9UN81 338 aa10.83□□□□□ -0.68
RAB5B-206ENST00000549505 TFR2Q9UP52 801 aa10.83□□□□□ -0.68
RAB5B-206ENST00000549505 DENND3A2RUS2 1198 aa10.83□□□□□ -0.68
RAB5B-206ENST00000549505 LRRIQ3A6PVS8 624 aaPredicted RBP10.83□□□□□ -0.68
RAB5B-206ENST00000549505 PDE2AO00408 941 aaPredicted RBP10.83□□□□□ -0.68
RAB5B-206ENST00000549505 FAM189A1O60320 539 aa10.83□□□□□ -0.68
RAB5B-206ENST00000549505 PNMA6AP0CW24 399 aaPredicted RBP10.83□□□□□ -0.68
RAB5B-206ENST00000549505 DLG4P78352 724 aa10.83□□□□□ -0.68
RAB5B-206ENST00000549505 DPY19L2Q6NUT2 758 aa10.83□□□□□ -0.68
RAB5B-206ENST00000549505 ACTRT1Q8TDG2 376 aa10.83□□□□□ -0.68
RAB5B-206ENST00000549505 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP10.83□□□□□ -0.685e-8■■■■■ 65.3
RAB5B-206ENST00000549505 PBKQ96KB5 322 aa10.83□□□□□ -0.68
RAB5B-206ENST00000549505 IFT74Q96LB3 600 aa10.83□□□□□ -0.68
RAB5B-206ENST00000549505 TAF1DQ9H5J8 278 aaPredicted RBP10.83□□□□□ -0.68
RAB5B-206ENST00000549505 NRBP2Q9NSY0 501 aa10.83□□□□□ -0.68
RAB5B-206ENST00000549505 IQCA1LA6NCM1 817 aa10.82□□□□□ -0.68
RAB5B-206ENST00000549505 ZBTB42B2RXF5 422 aa10.82□□□□□ -0.68
RAB5B-206ENST00000549505 LDHAP00338 332 aaKnown RBP10.82□□□□□ -0.68
RAB5B-206ENST00000549505 GLRA2P23416 452 aa10.82□□□□□ -0.68
RAB5B-206ENST00000549505 GJA5P36382 358 aa10.82□□□□□ -0.68
RAB5B-206ENST00000549505 FSTL1Q12841 308 aa10.82□□□□□ -0.68
RAB5B-206ENST00000549505 UTP14CQ5TAP6 766 aaKnown RBP10.82□□□□□ -0.68
RAB5B-206ENST00000549505 TMCO3Q6UWJ1 677 aa10.82□□□□□ -0.68
RAB5B-206ENST00000549505 ANKRD35Q8N283 1001 aa10.82□□□□□ -0.68
RAB5B-206ENST00000549505 LINC01465Q8N7H1 131 aa10.82□□□□□ -0.68
RAB5B-206ENST00000549505 TPCN2Q8NHX9 752 aa10.82□□□□□ -0.68
RAB5B-206ENST00000549505 LMBR1Q8WVP7 490 aa10.82□□□□□ -0.68
RAB5B-206ENST00000549505 GPR20Q99678 358 aa10.82□□□□□ -0.68
RAB5B-206ENST00000549505 POLR3FQ9H1D9 316 aaPredicted RBP10.82□□□□□ -0.68
RAB5B-206ENST00000549505 TMEM51Q9NW97 253 aa10.82□□□□□ -0.68
RAB5B-206ENST00000549505 HDAC6Q9UBN7 1215 aa10.82□□□□□ -0.68
RAB5B-206ENST00000549505 ADAMTS1Q9UHI8 967 aa10.82□□□□□ -0.68
RAB5B-206ENST00000549505 PLXNA1Q9UIW2 1896 aa10.82□□□□□ -0.68
RAB5B-206ENST00000549505 A0A0B4J269 797 aa10.82□□□□□ -0.68
RAB5B-206ENST00000549505 TMEM150BA6NC51 233 aa10.82□□□□□ -0.68
RAB5B-206ENST00000549505 PROZP22891 400 aa10.82□□□□□ -0.68
RAB5B-206ENST00000549505 AP3M2P53677 418 aa10.82□□□□□ -0.68
RAB5B-206ENST00000549505 ZNF792Q3KQV3 632 aa10.82□□□□□ -0.68
RAB5B-206ENST00000549505 TDRD12Q587J7 1177 aaKnown RBP10.82□□□□□ -0.68
RAB5B-206ENST00000549505 MAMDC4Q6UXC1 1216 aa10.82□□□□□ -0.68
RAB5B-206ENST00000549505 ANKRD23Q86SG2 305 aa10.82□□□□□ -0.68
RAB5B-206ENST00000549505 SYCE1Q8N0S2 351 aa10.82□□□□□ -0.68
RAB5B-206ENST00000549505 ZNF526Q8TF50 670 aaPredicted RBP10.82□□□□□ -0.68
RAB5B-206ENST00000549505 CNKSR2Q8WXI2 1034 aa10.82□□□□□ -0.68
RAB5B-206ENST00000549505 HES6Q96HZ4 224 aa10.82□□□□□ -0.68
RAB5B-206ENST00000549505 PNKPQ96T60 521 aa10.82□□□□□ -0.68
RAB5B-206ENST00000549505 PKD2L1Q9P0L9 805 aa10.82□□□□□ -0.68
RAB5B-206ENST00000549505 NOL12Q9UGY1 213 aaKnown RBP eCLIP10.82□□□□□ -0.68
RAB5B-206ENST00000549505 TELO2Q9Y4R8 837 aa10.82□□□□□ -0.68
RAB5B-206ENST00000549505 V9GYY5 206 aaPredicted RBP10.82□□□□□ -0.68
RAB5B-206ENST00000549505 COL1A2P08123 1366 aa10.82□□□□□ -0.68
RAB5B-206ENST00000549505 ANKRD62A6NC57 917 aa10.82□□□□□ -0.68
RAB5B-206ENST00000549505 ABLIM1O14639 778 aa10.82□□□□□ -0.68
RAB5B-206ENST00000549505 H2AFZP0C0S5 128 aa10.82□□□□□ -0.68
RAB5B-206ENST00000549505 ERCC3P19447 782 aa10.82□□□□□ -0.68
RAB5B-206ENST00000549505 EFNA5P52803 228 aa10.82□□□□□ -0.68
RAB5B-206ENST00000549505 SNAPC2Q13487 334 aa10.82□□□□□ -0.68
RAB5B-206ENST00000549505 CLUL1Q15846 466 aa10.82□□□□□ -0.68
RAB5B-206ENST00000549505 KIAA0753Q2KHM9 967 aa10.82□□□□□ -0.68
RAB5B-206ENST00000549505 IER5Q5VY09 327 aa10.82□□□□□ -0.68
RAB5B-206ENST00000549505 C11orf63Q6NUN7 778 aa10.82□□□□□ -0.68
RAB5B-206ENST00000549505 CRELD2Q6UXH1 353 aaPredicted RBP10.82□□□□□ -0.68
RAB5B-206ENST00000549505 H2AFVQ71UI9 128 aa10.82□□□□□ -0.68
RAB5B-206ENST00000549505 UBR7Q8N806 425 aa10.82□□□□□ -0.68
RAB5B-206ENST00000549505 NOA1Q8NC60 698 aaKnown RBP10.82□□□□□ -0.68
RAB5B-206ENST00000549505 ELP3Q9H9T3 547 aa10.82□□□□□ -0.68
RAB5B-206ENST00000549505 MYH9P35579 1960 aaKnown RBP10.81□□□□□ -0.68
RAB5B-206ENST00000549505 ADCY3O60266 1144 aa10.81□□□□□ -0.68
RAB5B-206ENST00000549505 TRIM49P0CI25 452 aa10.81□□□□□ -0.68
RAB5B-206ENST00000549505 TRIM49CP0CI26 452 aa10.81□□□□□ -0.68
RAB5B-206ENST00000549505 IRX3P78415 501 aaPredicted RBP10.81□□□□□ -0.68
RAB5B-206ENST00000549505 FAM187BQ17R55 369 aa10.81□□□□□ -0.68
RAB5B-206ENST00000549505 ZNF677Q86XU0 584 aa10.81□□□□□ -0.68
RAB5B-206ENST00000549505 RFFLQ8WZ73 363 aa10.81□□□□□ -0.68
RAB5B-206ENST00000549505 DDX1Q92499 740 aaKnown RBP10.81□□□□□ -0.68
RAB5B-206ENST00000549505 OPTNQ96CV9 577 aa10.81□□□□□ -0.68
RAB5B-206ENST00000549505 MS4A4AQ96JQ5 239 aa10.81□□□□□ -0.68
RAB5B-206ENST00000549505 AGPAT1Q99943 283 aa10.81□□□□□ -0.68
RAB5B-206ENST00000549505 JPH2Q9BR39 696 aaPredicted RBP10.81□□□□□ -0.68
RAB5B-206ENST00000549505 KATNBL1Q9H079 304 aa10.81□□□□□ -0.68
RAB5B-206ENST00000549505 POLD4Q9HCU8 107 aa10.81□□□□□ -0.68
RAB5B-206ENST00000549505 TXNRD2Q9NNW7 524 aa10.81□□□□□ -0.68
RAB5B-206ENST00000549505 ARFGAP3Q9NP61 516 aa10.81□□□□□ -0.68
RAB5B-206ENST00000549505 PNMA3Q9UL41 463 aa10.81□□□□□ -0.68
RAB5B-206ENST00000549505 MACROD2A1Z1Q3 448 aa10.81□□□□□ -0.68
RAB5B-206ENST00000549505 ASB14A6NK59 587 aa10.81□□□□□ -0.68
RAB5B-206ENST00000549505 PALMO75781 387 aa10.81□□□□□ -0.68
RAB5B-206ENST00000549505 C4BPAP04003 597 aaKnown RBP10.81□□□□□ -0.68
RAB5B-206ENST00000549505 MXI1P50539 228 aa10.81□□□□□ -0.68
RAB5B-206ENST00000549505 ZACNQ401N2 412 aa10.81□□□□□ -0.68
RAB5B-206ENST00000549505 TEX35Q5T0J7 233 aa10.81□□□□□ -0.68
RAB5B-206ENST00000549505 TCERG1LQ5VWI1 586 aa10.81□□□□□ -0.68
RAB5B-206ENST00000549505 CYFIP1Q7L576 1253 aa10.81□□□□□ -0.68
RAB5B-206ENST00000549505 ARHGEF19Q8IW93 802 aa10.81□□□□□ -0.68
RAB5B-206ENST00000549505 KRT222Q8N1A0 295 aa10.81□□□□□ -0.68
RAB5B-206ENST00000549505 ASAP3Q8TDY4 903 aa10.81□□□□□ -0.68
RAB5B-206ENST00000549505 SCFD2Q8WU76 684 aa10.81□□□□□ -0.68
RAB5B-206ENST00000549505 TCP11Q8WWU5 503 aa10.81□□□□□ -0.68
RAB5B-206ENST00000549505 CLMNQ96JQ2 1002 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms