RNA–Protein interactions for RNA: ENST00000549100.5

DEPDC4-206, Transcript of DEP domain containing 4, humanhuman

TSL 3

Gene DEPDC4, Length 501 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-206ENST00000549100 LTN1O94822 1766 aa2.89□□□□□ -1.95
DEPDC4-206ENST00000549100 IGSF1Q8N6C5 1336 aa2.89□□□□□ -1.95
DEPDC4-206ENST00000549100 CHD2O14647 1828 aaKnown RBP2.89□□□□□ -1.95
DEPDC4-206ENST00000549100 SLIT1O75093 1534 aa2.88□□□□□ -1.95
DEPDC4-206ENST00000549100 KIAA0232Q92628 1395 aa2.88□□□□□ -1.95
DEPDC4-206ENST00000549100 KDM3BQ7LBC6 1761 aa2.88□□□□□ -1.95
DEPDC4-206ENST00000549100 A0A0G2JLW4 131 aa2.88□□□□□ -1.95
DEPDC4-206ENST00000549100 A0A1W2PQJ5 194 aa2.88□□□□□ -1.95
DEPDC4-206ENST00000549100 TCRBV5S2A0A599 114 aa2.88□□□□□ -1.95
DEPDC4-206ENST00000549100 FAM90A27PA6NNH2 459 aa2.88□□□□□ -1.95
DEPDC4-206ENST00000549100 H7C1D1 291 aa2.88□□□□□ -1.95
DEPDC4-206ENST00000549100 KRIT1O00522 736 aa2.88□□□□□ -1.95
DEPDC4-206ENST00000549100 HGSO14964 777 aaPredicted RBP2.88□□□□□ -1.95
DEPDC4-206ENST00000549100 SRGAP3O43295 1099 aa2.88□□□□□ -1.95
DEPDC4-206ENST00000549100 CLASP2O75122 1294 aaKnown RBP2.88□□□□□ -1.95
DEPDC4-206ENST00000549100 LARGE1O95461 756 aa2.88□□□□□ -1.95
DEPDC4-206ENST00000549100 AMHP03971 560 aa2.88□□□□□ -1.95
DEPDC4-206ENST00000549100 NBPF7P0C2Y1 421 aaPredicted RBP2.88□□□□□ -1.95
DEPDC4-206ENST00000549100 PNLIPP16233 465 aa2.88□□□□□ -1.95
DEPDC4-206ENST00000549100 PTX3P26022 381 aaPredicted RBP2.88□□□□□ -1.95
DEPDC4-206ENST00000549100 SLC6A11P48066 632 aa2.88□□□□□ -1.95
DEPDC4-206ENST00000549100 PIP4K2AP48426 406 aaPredicted RBP2.88□□□□□ -1.95
DEPDC4-206ENST00000549100 KIF11P52732 1056 aa2.88□□□□□ -1.95
DEPDC4-206ENST00000549100 ERVK-21P61565 698 aa2.88□□□□□ -1.95
DEPDC4-206ENST00000549100 SMAD3P84022 425 aaKnown RBP2.88□□□□□ -1.95
DEPDC4-206ENST00000549100 ATP8B2P98198 1209 aa2.88□□□□□ -1.95
DEPDC4-206ENST00000549100 OCRLQ01968 901 aa2.88□□□□□ -1.95
DEPDC4-206ENST00000549100 MCL1Q07820 350 aa2.88□□□□□ -1.95
DEPDC4-206ENST00000549100 TUSC3Q13454 348 aa2.88□□□□□ -1.95
DEPDC4-206ENST00000549100 RAB3GAP1Q15042 981 aa2.88□□□□□ -1.95
DEPDC4-206ENST00000549100 TTF1Q15361 905 aaPredicted RBP2.88□□□□□ -1.95
DEPDC4-206ENST00000549100 SMAD2Q15796 467 aaKnown RBP2.88□□□□□ -1.95
DEPDC4-206ENST00000549100 ARHGAP44Q17R89 818 aa2.88□□□□□ -1.95
DEPDC4-206ENST00000549100 BMP2KLQ5H9B9 411 aa2.88□□□□□ -1.95
DEPDC4-206ENST00000549100 EPHA10Q5JZY3 1008 aa2.88□□□□□ -1.95
DEPDC4-206ENST00000549100 BROXQ5VW32 411 aa2.88□□□□□ -1.95
DEPDC4-206ENST00000549100 IQSEC1Q6DN90 963 aa2.88□□□□□ -1.95
DEPDC4-206ENST00000549100 ESRP1Q6NXG1 681 aaKnown RBP2.88□□□□□ -1.95
DEPDC4-206ENST00000549100 KCTD1Q719H9 257 aa2.88□□□□□ -1.95
DEPDC4-206ENST00000549100 DCP2Q8IU60 420 aaKnown RBP2.88□□□□□ -1.95
DEPDC4-206ENST00000549100 CMIPQ8IY22 773 aa2.88□□□□□ -1.95
DEPDC4-206ENST00000549100 LILRA2Q8N149 483 aa2.88□□□□□ -1.95
DEPDC4-206ENST00000549100 CBARPQ8N350 705 aaPredicted RBP2.88□□□□□ -1.95
DEPDC4-206ENST00000549100 NETO2Q8NC67 525 aa2.88□□□□□ -1.95
DEPDC4-206ENST00000549100 ARRDC4Q8NCT1 418 aa2.88□□□□□ -1.95
DEPDC4-206ENST00000549100 CLEC4DQ8WXI8 215 aa2.88□□□□□ -1.95
DEPDC4-206ENST00000549100 DLG3Q92796 817 aa2.88□□□□□ -1.95
DEPDC4-206ENST00000549100 SLC5A5Q92911 643 aa2.88□□□□□ -1.95
DEPDC4-206ENST00000549100 SNX21Q969T3 373 aa2.88□□□□□ -1.95
DEPDC4-206ENST00000549100 SMOC1Q9H4F8 434 aa2.88□□□□□ -1.95
DEPDC4-206ENST00000549100 ZMAT4Q9H898 229 aa2.88□□□□□ -1.95
DEPDC4-206ENST00000549100 IL1RAPL2Q9NP60 686 aa2.88□□□□□ -1.95
DEPDC4-206ENST00000549100 ASH2LQ9UBL3 628 aa2.88□□□□□ -1.95
DEPDC4-206ENST00000549100 PLA2G2DQ9UNK4 145 aa2.88□□□□□ -1.95
DEPDC4-206ENST00000549100 ZNF652Q9Y2D9 606 aa2.88□□□□□ -1.95
DEPDC4-206ENST00000549100 SPO11Q9Y5K1 396 aa2.88□□□□□ -1.95
DEPDC4-206ENST00000549100 B3GALT1Q9Y5Z6 326 aa2.88□□□□□ -1.95
DEPDC4-206ENST00000549100 LRRFIP2Q9Y608 721 aaKnown RBP2.88□□□□□ -1.95
DEPDC4-206ENST00000549100 C5P01031 1676 aa2.88□□□□□ -1.95
DEPDC4-206ENST00000549100 USP54Q70EL1 1684 aa2.88□□□□□ -1.95
DEPDC4-206ENST00000549100 SOS1Q07889 1333 aaPredicted RBP2.88□□□□□ -1.95
DEPDC4-206ENST00000549100 NFAT5O94916 1531 aa2.88□□□□□ -1.95
DEPDC4-206ENST00000549100 ADCY9O60503 1353 aa2.87□□□□□ -1.95
DEPDC4-206ENST00000549100 KDRP35968 1356 aa2.87□□□□□ -1.95
DEPDC4-206ENST00000549100 MED1Q15648 1581 aaPredicted RBP2.87□□□□□ -1.95
DEPDC4-206ENST00000549100 FER1L4A9Z1Z3 1794 aa2.87□□□□□ -1.95
DEPDC4-206ENST00000549100 A0A1B0GTL3 188 aa2.87□□□□□ -1.95
DEPDC4-206ENST00000549100 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP2.87□□□□□ -1.95
DEPDC4-206ENST00000549100 RASSF10A6NK89 507 aa2.87□□□□□ -1.95
DEPDC4-206ENST00000549100 NUDT19A8MXV4 375 aa2.87□□□□□ -1.95
DEPDC4-206ENST00000549100 K7ESF4 209 aa2.87□□□□□ -1.95
DEPDC4-206ENST00000549100 ACOT7O00154 380 aa2.87□□□□□ -1.95
DEPDC4-206ENST00000549100 IPO8O15397 1037 aaKnown RBP2.87□□□□□ -1.95
DEPDC4-206ENST00000549100 AP5Z1O43299 807 aa2.87□□□□□ -1.95
DEPDC4-206ENST00000549100 BUB1BO60566 1050 aaPredicted RBP2.87□□□□□ -1.95
DEPDC4-206ENST00000549100 HIP1RO75146 1068 aa2.87□□□□□ -1.95
DEPDC4-206ENST00000549100 ULK1O75385 1050 aa2.87□□□□□ -1.95
DEPDC4-206ENST00000549100 C4BPAP04003 597 aaKnown RBP2.87□□□□□ -1.95
DEPDC4-206ENST00000549100 CYBBP04839 570 aa2.87□□□□□ -1.95
DEPDC4-206ENST00000549100 PTPN1P18031 435 aaKnown RBP2.87□□□□□ -1.95
DEPDC4-206ENST00000549100 EIF2S2P20042 333 aaKnown RBP2.87□□□□□ -1.95
DEPDC4-206ENST00000549100 VIPR1P32241 457 aa2.87□□□□□ -1.95
DEPDC4-206ENST00000549100 THBS2P35442 1172 aa2.87□□□□□ -1.95
DEPDC4-206ENST00000549100 IARSP41252 1262 aaKnown RBP2.87□□□□□ -1.95
DEPDC4-206ENST00000549100 NEK2P51955 445 aa2.87□□□□□ -1.95
DEPDC4-206ENST00000549100 PDE1AP54750 535 aa2.87□□□□□ -1.95
DEPDC4-206ENST00000549100 EPHA5P54756 1037 aa2.87□□□□□ -1.95
DEPDC4-206ENST00000549100 ERVFRD-1P60508 538 aa2.87□□□□□ -1.95
DEPDC4-206ENST00000549100 EIF4A1P60842 406 aaKnown RBP2.87□□□□□ -1.95
DEPDC4-206ENST00000549100 PTH1RQ03431 593 aa2.87□□□□□ -1.95
DEPDC4-206ENST00000549100 GRIN1Q05586 938 aa2.87□□□□□ -1.95
DEPDC4-206ENST00000549100 SLC39A6Q13433 755 aa2.87□□□□□ -1.95
DEPDC4-206ENST00000549100 TMEM132BQ14DG7 1078 aa2.87□□□□□ -1.95
DEPDC4-206ENST00000549100 TERF2Q15554 542 aa2.87□□□□□ -1.95
DEPDC4-206ENST00000549100 ZNF174Q15697 407 aa2.87□□□□□ -1.95
DEPDC4-206ENST00000549100 DDB1Q16531 1140 aa2.87□□□□□ -1.95
DEPDC4-206ENST00000549100 ABCB5Q2M3G0 1257 aa2.87□□□□□ -1.95
DEPDC4-206ENST00000549100 INAVAQ3KP66 663 aa2.87□□□□□ -1.95
DEPDC4-206ENST00000549100 CATSPEREQ5SY80 951 aa2.87□□□□□ -1.95
DEPDC4-206ENST00000549100 NT5DC1Q5TFE4 455 aa2.87□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms