RNA–Protein interactions for RNA: ENST00000548945.6

PTCH1-218, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 243 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-218ENST00000548945 ERLIN2O94905 339 aa14.33□□□□□ -0.12
PTCH1-218ENST00000548945 LYPLA2O95372 231 aa14.33□□□□□ -0.12
PTCH1-218ENST00000548945 C1RP00736 705 aa14.33□□□□□ -0.12
PTCH1-218ENST00000548945 SOD2P04179 222 aa14.33□□□□□ -0.12
PTCH1-218ENST00000548945 CNPP09543 421 aaKnown RBP14.33□□□□□ -0.12
PTCH1-218ENST00000548945 ITGA4P13612 1032 aa14.33□□□□□ -0.12
PTCH1-218ENST00000548945 CLCN5P51795 746 aa14.33□□□□□ -0.12
PTCH1-218ENST00000548945 AFF1P51825 1210 aaKnown RBP14.33□□□□□ -0.12
PTCH1-218ENST00000548945 PTENP60484 403 aa14.33□□□□□ -0.12
PTCH1-218ENST00000548945 NCBP1Q09161 790 aaKnown RBP14.33□□□□□ -0.12
PTCH1-218ENST00000548945 XKR9Q5GH70 373 aa14.33□□□□□ -0.12
PTCH1-218ENST00000548945 ASTLQ6HA08 431 aaPredicted RBP14.33□□□□□ -0.12
PTCH1-218ENST00000548945 KANK3Q6NY19 840 aa14.33□□□□□ -0.12
PTCH1-218ENST00000548945 NOTUMQ6P988 496 aa14.33□□□□□ -0.12
PTCH1-218ENST00000548945 ELMSAN1Q6PJG2 1045 aa14.33□□□□□ -0.12
PTCH1-218ENST00000548945 PIK3AP1Q6ZUJ8 805 aa14.33□□□□□ -0.12
PTCH1-218ENST00000548945 CCDC149Q6ZUS6 474 aa14.33□□□□□ -0.12
PTCH1-218ENST00000548945 POTEDQ86YR6 584 aa14.33□□□□□ -0.12
PTCH1-218ENST00000548945 SMG8Q8ND04 991 aaKnown RBP14.33□□□□□ -0.12
PTCH1-218ENST00000548945 ATOH1Q92858 354 aaPredicted RBP14.33□□□□□ -0.12
PTCH1-218ENST00000548945 MTRQ99707 1265 aa14.33□□□□□ -0.12
PTCH1-218ENST00000548945 HERC2P3Q9BVR0 1158 aa14.33□□□□□ -0.12
PTCH1-218ENST00000548945 RGL1Q9NZL6 768 aa14.33□□□□□ -0.12
PTCH1-218ENST00000548945 ZMYM2Q9UBW7 1377 aa14.33□□□□□ -0.12
PTCH1-218ENST00000548945 GFRA3O60609 400 aa14.32□□□□□ -0.12
PTCH1-218ENST00000548945 EFEMP2O95967 443 aa14.32□□□□□ -0.12
PTCH1-218ENST00000548945 URODP06132 367 aa14.32□□□□□ -0.12
PTCH1-218ENST00000548945 ASGR2P07307 311 aa14.32□□□□□ -0.12
PTCH1-218ENST00000548945 ADH1AP07327 375 aa14.32□□□□□ -0.12
PTCH1-218ENST00000548945 DSC1Q08554 894 aa14.32□□□□□ -0.12
PTCH1-218ENST00000548945 TFDP1Q14186 410 aa14.32□□□□□ -0.12
PTCH1-218ENST00000548945 NCAPH2Q6IBW4 605 aa14.32□□□□□ -0.12
PTCH1-218ENST00000548945 COLGALT2Q8IYK4 626 aa14.32□□□□□ -0.12
PTCH1-218ENST00000548945 GPR65Q8IYL9 337 aa14.32□□□□□ -0.12
PTCH1-218ENST00000548945 RNF168Q8IYW5 571 aaPredicted RBP14.32□□□□□ -0.12
PTCH1-218ENST00000548945 OXER1Q8TDS5 423 aa14.32□□□□□ -0.12
PTCH1-218ENST00000548945 DYDC2Q96IM9 177 aa14.32□□□□□ -0.12
PTCH1-218ENST00000548945 RPS6KC1Q96S38 1066 aa14.32□□□□□ -0.12
PTCH1-218ENST00000548945 NFKBIZQ9BYH8 718 aa14.32□□□□□ -0.12
PTCH1-218ENST00000548945 ARL5CA6NH57 179 aa14.31□□□□□ -0.12
PTCH1-218ENST00000548945 SPDYE4A6NLX3 237 aa14.31□□□□□ -0.12
PTCH1-218ENST00000548945 H0Y858 1186 aa14.31□□□□□ -0.12
PTCH1-218ENST00000548945 TSPAN1O60635 241 aa14.31□□□□□ -0.12
PTCH1-218ENST00000548945 NR1I2O75469 434 aa14.31□□□□□ -0.12
PTCH1-218ENST00000548945 DGAT1O75907 488 aa14.31□□□□□ -0.12
PTCH1-218ENST00000548945 SLITRK3O94933 977 aa14.31□□□□□ -0.12
PTCH1-218ENST00000548945 PAPLNO95428 1278 aa14.31□□□□□ -0.12
PTCH1-218ENST00000548945 POMCP01189 267 aa14.31□□□□□ -0.12
PTCH1-218ENST00000548945 TDGQ13569 410 aa14.31□□□□□ -0.12
PTCH1-218ENST00000548945 ANKRD1Q15327 319 aa14.31□□□□□ -0.12
PTCH1-218ENST00000548945 HACE1Q8IYU2 909 aa14.31□□□□□ -0.12
PTCH1-218ENST00000548945 TMEM105Q8N8V8 129 aa14.31□□□□□ -0.12
PTCH1-218ENST00000548945 HDAC7Q8WUI4 952 aa14.31□□□□□ -0.12
PTCH1-218ENST00000548945 HSD17B14Q9BPX1 270 aa14.31□□□□□ -0.12
PTCH1-218ENST00000548945 CSRNP2Q9H175 543 aa14.31□□□□□ -0.12
PTCH1-218ENST00000548945 MFSD1Q9H3U5 465 aa14.31□□□□□ -0.12
PTCH1-218ENST00000548945 RXFP1Q9HBX9 757 aa14.31□□□□□ -0.12
PTCH1-218ENST00000548945 BRMS1Q9HCU9 246 aa14.31□□□□□ -0.12
PTCH1-218ENST00000548945 XPNPEP1Q9NQW7 623 aa14.31□□□□□ -0.12
PTCH1-218ENST00000548945 ANKEF1Q9NU02 776 aa14.31□□□□□ -0.12
PTCH1-218ENST00000548945 FAM86C1Q9NVL1 165 aa14.31□□□□□ -0.12
PTCH1-218ENST00000548945 MARCH5Q9NX47 278 aa14.31□□□□□ -0.12
PTCH1-218ENST00000548945 IGSF9Q9P2J2 1179 aa14.31□□□□□ -0.12
PTCH1-218ENST00000548945 ORC3Q9UBD5 711 aaPredicted RBP14.31□□□□□ -0.12
PTCH1-218ENST00000548945 TPCN1Q9ULQ1 816 aa14.31□□□□□ -0.12
PTCH1-218ENST00000548945 IPPQ9Y573 584 aa14.31□□□□□ -0.12
PTCH1-218ENST00000548945 FRYLO94915 3013 aa14.3□□□□□ -0.12
PTCH1-218ENST00000548945 EP300Q09472 2414 aaPredicted RBP14.3□□□□□ -0.12
PTCH1-218ENST00000548945 ZBTB39O15060 712 aa14.3□□□□□ -0.12
PTCH1-218ENST00000548945 SSBP05455 408 aaKnown RBP eCLIP14.3□□□□□ -0.12
PTCH1-218ENST00000548945 KRT2P35908 639 aa14.3□□□□□ -0.12
PTCH1-218ENST00000548945 GLUD2P49448 558 aa14.3□□□□□ -0.12
PTCH1-218ENST00000548945 ANAPC15P60006 121 aa14.3□□□□□ -0.12
PTCH1-218ENST00000548945 DSG1Q02413 1049 aa14.3□□□□□ -0.12
PTCH1-218ENST00000548945 CYP4A11Q02928 519 aa14.3□□□□□ -0.12
PTCH1-218ENST00000548945 CTTNQ14247 550 aaKnown RBP14.3□□□□□ -0.12
PTCH1-218ENST00000548945 EARS2Q5JPH6 523 aaKnown RBP14.3□□□□□ -0.12
PTCH1-218ENST00000548945 KIAA0319Q5VV43 1072 aa14.3□□□□□ -0.12
PTCH1-218ENST00000548945 TPH2Q8IWU9 490 aa14.3□□□□□ -0.12
PTCH1-218ENST00000548945 TNFRSF25Q93038 417 aa14.3□□□□□ -0.12
PTCH1-218ENST00000548945 EIF2AK1Q9BQI3 630 aaKnown RBP14.3□□□□□ -0.12
PTCH1-218ENST00000548945 EIF2AQ9BY44 585 aaKnown RBP14.3□□□□□ -0.12
PTCH1-218ENST00000548945 SMOC2Q9H3U7 446 aa14.3□□□□□ -0.12
PTCH1-218ENST00000548945 MAN1C1Q9NR34 630 aa14.3□□□□□ -0.12
PTCH1-218ENST00000548945 BMP2KQ9NSY1 1161 aaPredicted RBP14.3□□□□□ -0.12
PTCH1-218ENST00000548945 GJB4Q9NTQ9 266 aa14.3□□□□□ -0.12
PTCH1-218ENST00000548945 PCDHA12Q9UN75 941 aa14.3□□□□□ -0.12
PTCH1-218ENST00000548945 DUSP12Q9UNI6 340 aa14.3□□□□□ -0.12
PTCH1-218ENST00000548945 GIT1Q9Y2X7 761 aa14.3□□□□□ -0.12
PTCH1-218ENST00000548945 PRG3Q9Y2Y8 225 aaPredicted RBP14.3□□□□□ -0.12
PTCH1-218ENST00000548945 INO80B-WBP1J3KQ70 363 aa14.29□□□□□ -0.12
PTCH1-218ENST00000548945 TEX28O15482 410 aa14.29□□□□□ -0.12
PTCH1-218ENST00000548945 CTDNEP1O95476 244 aa14.29□□□□□ -0.12
PTCH1-218ENST00000548945 GLUD1P00367 558 aa14.29□□□□□ -0.12
PTCH1-218ENST00000548945 ARL2P36404 184 aa14.29□□□□□ -0.12
PTCH1-218ENST00000548945 MLH1P40692 756 aa14.29□□□□□ -0.12
PTCH1-218ENST00000548945 NBL1P41271 181 aa14.29□□□□□ -0.12
PTCH1-218ENST00000548945 OR1G1P47890 313 aa14.29□□□□□ -0.12
PTCH1-218ENST00000548945 AK2P54819 239 aa14.29□□□□□ -0.12
PTCH1-218ENST00000548945 MBTD1Q05BQ5 628 aa14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms