RNA–Protein interactions for RNA: ENST00000548650.1

CHMP1A-205, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 3

Gene CHMP1A, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-205ENST00000548650 KCNH6Q9H252 994 aa19.33■□□□□ 0.68
CHMP1A-205ENST00000548650 RNF39Q9H2S5 420 aa19.33■□□□□ 0.68
CHMP1A-205ENST00000548650 NXF3Q9H4D5 531 aaKnown RBP19.33■□□□□ 0.68
CHMP1A-205ENST00000548650 UBN1Q9NPG3 1134 aa19.33■□□□□ 0.68
CHMP1A-205ENST00000548650 STK39Q9UEW8 545 aa19.33■□□□□ 0.68
CHMP1A-205ENST00000548650 LIMCH1Q9UPQ0 1083 aa19.33■□□□□ 0.68
CHMP1A-205ENST00000548650 HES2Q9Y543 173 aa19.33■□□□□ 0.68
CHMP1A-205ENST00000548650 WDFY4Q6ZS81 3184 aa19.32■□□□□ 0.68
CHMP1A-205ENST00000548650 A0A087WWV3 80 aa19.32■□□□□ 0.68
CHMP1A-205ENST00000548650 ARL5CA6NH57 179 aa19.32■□□□□ 0.68
CHMP1A-205ENST00000548650 WEE2P0C1S8 567 aa19.32■□□□□ 0.68
CHMP1A-205ENST00000548650 ATP2B1P20020 1258 aa19.32■□□□□ 0.68
CHMP1A-205ENST00000548650 DSC1Q08554 894 aa19.32■□□□□ 0.68
CHMP1A-205ENST00000548650 SAFBQ15424 915 aaKnown RBP eCLIP19.32■□□□□ 0.68
CHMP1A-205ENST00000548650 RARS2Q5T160 578 aaKnown RBP19.32■□□□□ 0.68
CHMP1A-205ENST00000548650 KIAA1841Q6NSI8 718 aa19.32■□□□□ 0.68
CHMP1A-205ENST00000548650 COLGALT2Q8IYK4 626 aa19.32■□□□□ 0.68
CHMP1A-205ENST00000548650 C12orf76Q8N812 135 aaPredicted RBP19.32■□□□□ 0.68
CHMP1A-205ENST00000548650 FEZF2Q8TBJ5 459 aa19.32■□□□□ 0.68
CHMP1A-205ENST00000548650 C8orf76Q96K31 380 aa19.32■□□□□ 0.68
CHMP1A-205ENST00000548650 FBXL18Q96ME1 805 aa19.32■□□□□ 0.68
CHMP1A-205ENST00000548650 ZFP42Q96MM3 310 aa19.32■□□□□ 0.68
CHMP1A-205ENST00000548650 FAM193BQ96PV7 902 aaPredicted RBP19.32■□□□□ 0.68
CHMP1A-205ENST00000548650 GAD1Q99259 594 aa19.32■□□□□ 0.68
CHMP1A-205ENST00000548650 TUFT1Q9NNX1 390 aa19.32■□□□□ 0.68
CHMP1A-205ENST00000548650 GPRC5CQ9NQ84 441 aa19.32■□□□□ 0.68
CHMP1A-205ENST00000548650 MYO10Q9HD67 2058 aa19.31■□□□□ 0.68
CHMP1A-205ENST00000548650 C2CD4DB7Z1M9 353 aa19.31■□□□□ 0.68
CHMP1A-205ENST00000548650 NRP1O14786 923 aa19.31■□□□□ 0.68
CHMP1A-205ENST00000548650 MED24O75448 989 aa19.31■□□□□ 0.68
CHMP1A-205ENST00000548650 SSBP05455 408 aaKnown RBP eCLIP19.31■□□□□ 0.68
CHMP1A-205ENST00000548650 XRCC6P12956 609 aaKnown RBP eCLIP19.31■□□□□ 0.68
CHMP1A-205ENST00000548650 MTHFRP42898 656 aa19.31■□□□□ 0.68
CHMP1A-205ENST00000548650 SCNN1GP51170 649 aa19.31■□□□□ 0.68
CHMP1A-205ENST00000548650 SIGLEC14Q08ET2 396 aa19.31■□□□□ 0.68
CHMP1A-205ENST00000548650 KANK3Q6NY19 840 aa19.31■□□□□ 0.68
CHMP1A-205ENST00000548650 CATSPER3Q86XQ3 398 aa19.31■□□□□ 0.68
CHMP1A-205ENST00000548650 RNF168Q8IYW5 571 aaPredicted RBP19.31■□□□□ 0.68
CHMP1A-205ENST00000548650 ASIC4Q96FT7 647 aa19.31■□□□□ 0.68
CHMP1A-205ENST00000548650 LLPHQ9BRT6 129 aaKnown RBP19.31■□□□□ 0.68
CHMP1A-205ENST00000548650 HERC2P3Q9BVR0 1158 aa19.31■□□□□ 0.68
CHMP1A-205ENST00000548650 TSHZ2Q9NRE2 1034 aa19.31■□□□□ 0.68
CHMP1A-205ENST00000548650 FAN1Q9Y2M0 1017 aa19.31■□□□□ 0.68
CHMP1A-205ENST00000548650 PRG3Q9Y2Y8 225 aaPredicted RBP19.31■□□□□ 0.68
CHMP1A-205ENST00000548650 NR2E1Q9Y466 385 aa19.31■□□□□ 0.68
CHMP1A-205ENST00000548650 ZMYM2Q9UBW7 1377 aa19.31■□□□□ 0.68
CHMP1A-205ENST00000548650 LILRB3O75022 631 aa19.3■□□□□ 0.68
CHMP1A-205ENST00000548650 EFEMP2O95967 443 aa19.3■□□□□ 0.68
CHMP1A-205ENST00000548650 SOD2P04179 222 aa19.3■□□□□ 0.68
CHMP1A-205ENST00000548650 CNPP09543 421 aaKnown RBP19.3■□□□□ 0.68
CHMP1A-205ENST00000548650 OR52Z1P0C646 297 aa19.3■□□□□ 0.68
CHMP1A-205ENST00000548650 ORC2Q13416 577 aaPredicted RBP19.3■□□□□ 0.68
CHMP1A-205ENST00000548650 CDCA2Q69YH5 1023 aaPredicted RBP19.3■□□□□ 0.68
CHMP1A-205ENST00000548650 POTEGQ6S5H5 508 aa19.3■□□□□ 0.68
CHMP1A-205ENST00000548650 PPFIBP1Q86W92 1011 aa19.3■□□□□ 0.68
CHMP1A-205ENST00000548650 TMEM87AQ8NBN3 555 aa19.3■□□□□ 0.68
CHMP1A-205ENST00000548650 PBXIP1Q96AQ6 731 aa19.3■□□□□ 0.68
CHMP1A-205ENST00000548650 RIPOR3Q96MK2 946 aa19.3■□□□□ 0.68
CHMP1A-205ENST00000548650 KLHL5Q96PQ7 755 aa19.3■□□□□ 0.68
CHMP1A-205ENST00000548650 POLR3CQ9BUI4 534 aaPredicted RBP19.3■□□□□ 0.68
CHMP1A-205ENST00000548650 APOL6Q9BWW8 343 aa19.3■□□□□ 0.68
CHMP1A-205ENST00000548650 FOXP1Q9H334 677 aaPredicted RBP19.3■□□□□ 0.68
CHMP1A-205ENST00000548650 DBR1Q9UK59 544 aaKnown RBP19.3■□□□□ 0.68
CHMP1A-205ENST00000548650 F8W810 466 aa19.29■□□□□ 0.68
CHMP1A-205ENST00000548650 ALDH2P05091 517 aa19.29■□□□□ 0.68
CHMP1A-205ENST00000548650 CENPBP07199 599 aaPredicted RBP19.29■□□□□ 0.68
CHMP1A-205ENST00000548650 CLCN4P51793 760 aa19.29■□□□□ 0.68
CHMP1A-205ENST00000548650 NHLH1Q02575 133 aa19.29■□□□□ 0.68
CHMP1A-205ENST00000548650 NCBP1Q09161 790 aaKnown RBP19.29■□□□□ 0.68
CHMP1A-205ENST00000548650 SLC27A1Q6PCB7 646 aa19.29■□□□□ 0.68
CHMP1A-205ENST00000548650 PPP4R3CPQ6ZMV5 832 aa19.29■□□□□ 0.68
CHMP1A-205ENST00000548650 CABP7Q86V35 215 aa19.29■□□□□ 0.68
CHMP1A-205ENST00000548650 CDR2LQ86X02 465 aaPredicted RBP19.29■□□□□ 0.68
CHMP1A-205ENST00000548650 GSTCDQ8NEC7 633 aa19.29■□□□□ 0.68
CHMP1A-205ENST00000548650 MCPH1Q8NEM0 835 aa19.29■□□□□ 0.68
CHMP1A-205ENST00000548650 KIF2CQ99661 725 aa19.29■□□□□ 0.68
CHMP1A-205ENST00000548650 EMILIN2Q9BXX0 1053 aa19.29■□□□□ 0.68
CHMP1A-205ENST00000548650 TRIM6Q9C030 488 aaPredicted RBP19.29■□□□□ 0.68
CHMP1A-205ENST00000548650 SFXN1Q9H9B4 322 aa19.29■□□□□ 0.68
CHMP1A-205ENST00000548650 MIOSQ9NXC5 875 aa19.29■□□□□ 0.68
CHMP1A-205ENST00000548650 GIT1Q9Y2X7 761 aa19.29■□□□□ 0.68
CHMP1A-205ENST00000548650 A0A1B0GUA9 196 aa19.28■□□□□ 0.68
CHMP1A-205ENST00000548650 LRRIQ4A6NIV6 560 aa19.28■□□□□ 0.68
CHMP1A-205ENST00000548650 NPTXRO95502 500 aa19.28■□□□□ 0.68
CHMP1A-205ENST00000548650 URODP06132 367 aa19.28■□□□□ 0.68
CHMP1A-205ENST00000548650 OR1G1P47890 313 aa19.28■□□□□ 0.68
CHMP1A-205ENST00000548650 ZNF174Q15697 407 aa19.28■□□□□ 0.68
CHMP1A-205ENST00000548650 TTC38Q5R3I4 469 aa19.28■□□□□ 0.68
CHMP1A-205ENST00000548650 MAEAQ7L5Y9 396 aa19.28■□□□□ 0.68
CHMP1A-205ENST00000548650 FBXL6Q8N531 539 aa19.28■□□□□ 0.68
CHMP1A-205ENST00000548650 TDRD5Q8NAT2 981 aaKnown RBP19.28■□□□□ 0.68
CHMP1A-205ENST00000548650 FBXO18Q8NFZ0 1043 aa19.28■□□□□ 0.68
CHMP1A-205ENST00000548650 BSNDQ8WZ55 320 aa19.28■□□□□ 0.68
CHMP1A-205ENST00000548650 MRPL17Q9NRX2 175 aaKnown RBP19.28■□□□□ 0.68
CHMP1A-205ENST00000548650 AKAP5P24588 427 aa19.27■□□□□ 0.68
CHMP1A-205ENST00000548650 RPA1P27694 616 aa19.27■□□□□ 0.68
CHMP1A-205ENST00000548650 HMGN5P82970 282 aaKnown RBP19.27■□□□□ 0.68
CHMP1A-205ENST00000548650 TMC5Q6UXY8 1006 aa19.27■□□□□ 0.68
CHMP1A-205ENST00000548650 TAS1R1Q7RTX1 841 aa19.27■□□□□ 0.68
CHMP1A-205ENST00000548650 ZBTB33Q86T24 672 aa19.27■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms