RNA–Protein interactions for RNA: ENST00000548560.1

SP1-203, Transcript of Sp1 transcription factor, humanhuman

TSL 2

Gene SP1, Length 1,061 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP1-203ENST00000548560 GPBP1Q86WP2 473 aa9.61□□□□□ -0.87
SP1-203ENST00000548560 CMTR2Q8IYT2 770 aaKnown RBP9.61□□□□□ -0.87
SP1-203ENST00000548560 HACE1Q8IYU2 909 aa9.61□□□□□ -0.87
SP1-203ENST00000548560 RNF169Q8NCN4 708 aa9.61□□□□□ -0.87
SP1-203ENST00000548560 RAD54LQ92698 747 aa9.61□□□□□ -0.87
SP1-203ENST00000548560 CCDC51Q96ER9 411 aa9.61□□□□□ -0.87
SP1-203ENST00000548560 EPSTI1Q96J88 318 aa9.61□□□□□ -0.87
SP1-203ENST00000548560 PRIMPOLQ96LW4 560 aa9.61□□□□□ -0.87
SP1-203ENST00000548560 SAMD11Q96NU1 681 aa9.61□□□□□ -0.87
SP1-203ENST00000548560 TGS1Q96RS0 853 aaKnown RBP9.61□□□□□ -0.87
SP1-203ENST00000548560 TRIM6Q9C030 488 aaPredicted RBP9.61□□□□□ -0.87
SP1-203ENST00000548560 MINDY3Q9H8M7 445 aa9.61□□□□□ -0.87
SP1-203ENST00000548560 C17orf75Q9HAS0 396 aa9.61□□□□□ -0.87
SP1-203ENST00000548560 FAM13BQ9NYF5 915 aa9.61□□□□□ -0.87
SP1-203ENST00000548560 ODF2LQ9ULJ1 636 aa9.61□□□□□ -0.87
SP1-203ENST00000548560 RWDD3Q9Y3V2 267 aa9.61□□□□□ -0.87
SP1-203ENST00000548560 TRIP11Q15643 1979 aa9.61□□□□□ -0.87
SP1-203ENST00000548560 PLXNA4Q9HCM2 1894 aa9.6□□□□□ -0.87
SP1-203ENST00000548560 A0A0U1RQF3 1178 aa9.6□□□□□ -0.87
SP1-203ENST00000548560 LINC01553A4QN01 128 aa9.6□□□□□ -0.87
SP1-203ENST00000548560 TBKBP1A7MCY6 615 aa9.6□□□□□ -0.87
SP1-203ENST00000548560 H0YCG3 227 aa9.6□□□□□ -0.87
SP1-203ENST00000548560 TSPAN1O60635 241 aa9.6□□□□□ -0.87
SP1-203ENST00000548560 DGKIO75912 1065 aa9.6□□□□□ -0.87
SP1-203ENST00000548560 FAM13AO94988 1023 aa9.6□□□□□ -0.87
SP1-203ENST00000548560 PRKCBP05771 671 aa9.6□□□□□ -0.87
SP1-203ENST00000548560 HOXB3P14651 431 aaPredicted RBP9.6□□□□□ -0.87
SP1-203ENST00000548560 FOSL2P15408 326 aa9.6□□□□□ -0.87
SP1-203ENST00000548560 CD46P15529 392 aa9.6□□□□□ -0.87
SP1-203ENST00000548560 LIG1P18858 919 aa9.6□□□□□ -0.87
SP1-203ENST00000548560 EFNA5P52803 228 aa9.6□□□□□ -0.87
SP1-203ENST00000548560 SMTNP53814 917 aa9.6□□□□□ -0.87
SP1-203ENST00000548560 PEX3P56589 373 aa9.6□□□□□ -0.87
SP1-203ENST00000548560 SPOUT1Q5T280 376 aaKnown RBP9.6□□□□□ -0.87
SP1-203ENST00000548560 APBB1IPQ7Z5R6 666 aaPredicted RBP9.6□□□□□ -0.87
SP1-203ENST00000548560 ECHDC2Q86YB7 292 aa9.6□□□□□ -0.87
SP1-203ENST00000548560 ARNTL2Q8WYA1 636 aa9.6□□□□□ -0.87
SP1-203ENST00000548560 BSNDQ8WZ55 320 aa9.6□□□□□ -0.87
SP1-203ENST00000548560 PGBD4Q96DM1 585 aa9.6□□□□□ -0.87
SP1-203ENST00000548560 SPATA32Q96LK8 384 aa9.6□□□□□ -0.87
SP1-203ENST00000548560 ADPGKQ9BRR6 497 aa9.6□□□□□ -0.87
SP1-203ENST00000548560 ZHX3Q9H4I2 956 aa9.6□□□□□ -0.87
SP1-203ENST00000548560 CERS4Q9HA82 394 aa9.6□□□□□ -0.87
SP1-203ENST00000548560 KMT5AQ9NQR1 393 aa9.6□□□□□ -0.87
SP1-203ENST00000548560 BLOC1S4Q9NUP1 217 aa9.6□□□□□ -0.87
SP1-203ENST00000548560 FAM105AQ9NUU6 356 aa9.6□□□□□ -0.87
SP1-203ENST00000548560 LARSQ9P2J5 1176 aaKnown RBP9.6□□□□□ -0.87
SP1-203ENST00000548560 LIMD1Q9UGP4 676 aa9.6□□□□□ -0.87
SP1-203ENST00000548560 MTUS1Q9ULD2 1270 aa9.6□□□□□ -0.87
SP1-203ENST00000548560 ATG2AQ2TAZ0 1938 aa9.6□□□□□ -0.87
SP1-203ENST00000548560 MUC3AQ02505 3323 aa9.59□□□□□ -0.87
SP1-203ENST00000548560 CNTNAP2Q9UHC6 1331 aa9.59□□□□□ -0.87
SP1-203ENST00000548560 N4BP3O15049 544 aa9.59□□□□□ -0.87
SP1-203ENST00000548560 EOMESO95936 686 aa9.59□□□□□ -0.87
SP1-203ENST00000548560 PLS3P13797 630 aa9.59□□□□□ -0.87
SP1-203ENST00000548560 COL9A1P20849 921 aa9.59□□□□□ -0.87
SP1-203ENST00000548560 CTNNB1P35222 781 aa9.59□□□□□ -0.87
SP1-203ENST00000548560 DDIT3P35638 169 aa9.59□□□□□ -0.87
SP1-203ENST00000548560 NPTX2P47972 431 aa9.59□□□□□ -0.87
SP1-203ENST00000548560 PRPF4BQ13523 1007 aaKnown RBP9.59□□□□□ -0.87
SP1-203ENST00000548560 GRIN2CQ14957 1233 aa9.59□□□□□ -0.87
SP1-203ENST00000548560 FAM187BQ17R55 369 aa9.59□□□□□ -0.87
SP1-203ENST00000548560 CSPP1Q1MSJ5 1256 aa9.59□□□□□ -0.87
SP1-203ENST00000548560 USP49Q70CQ1 688 aa9.59□□□□□ -0.87
SP1-203ENST00000548560 SV2BQ7L1I2 683 aa9.59□□□□□ -0.87
SP1-203ENST00000548560 LRRC43Q8N309 656 aa9.59□□□□□ -0.87
SP1-203ENST00000548560 PDILTQ8N807 584 aa9.59□□□□□ -0.87
SP1-203ENST00000548560 CNNM3Q8NE01 707 aa9.59□□□□□ -0.87
SP1-203ENST00000548560 MYLIPQ8WY64 445 aa9.59□□□□□ -0.87
SP1-203ENST00000548560 RSPH1Q8WYR4 309 aa9.59□□□□□ -0.87
SP1-203ENST00000548560 ZNF689Q96CS4 500 aaPredicted RBP9.59□□□□□ -0.87
SP1-203ENST00000548560 CPB2Q96IY4 423 aa9.59□□□□□ -0.87
SP1-203ENST00000548560 CDX2Q99626 313 aaPredicted RBP9.59□□□□□ -0.87
SP1-203ENST00000548560 REEP2Q9BRK0 252 aa9.59□□□□□ -0.87
SP1-203ENST00000548560 PYM1Q9BRP8 204 aaKnown RBP9.59□□□□□ -0.87
SP1-203ENST00000548560 KIFC3Q9BVG8 833 aa9.59□□□□□ -0.87
SP1-203ENST00000548560 TRAIPQ9BWF2 469 aa9.59□□□□□ -0.87
SP1-203ENST00000548560 MRPL9Q9BYD2 267 aaKnown RBP9.59□□□□□ -0.87
SP1-203ENST00000548560 SCAND2PQ9GZW5 306 aaPredicted RBP9.59□□□□□ -0.87
SP1-203ENST00000548560 TMEM117Q9H0C3 514 aa9.59□□□□□ -0.87
SP1-203ENST00000548560 CUEDC2Q9H467 287 aa9.59□□□□□ -0.87
SP1-203ENST00000548560 PRDM12Q9H4Q4 367 aa9.59□□□□□ -0.87
SP1-203ENST00000548560 RC3H2Q9HBD1 1191 aaKnown RBP9.59□□□□□ -0.87
SP1-203ENST00000548560 POLD4Q9HCU8 107 aa9.59□□□□□ -0.87
SP1-203ENST00000548560 ZDHHC9Q9Y397 364 aa9.59□□□□□ -0.87
SP1-203ENST00000548560 RBM19Q9Y4C8 960 aaKnown RBP9.59□□□□□ -0.87
SP1-203ENST00000548560 PDCD11Q14690 1871 aaKnown RBP9.58□□□□□ -0.88
SP1-203ENST00000548560 NPHP3-ACAD11A0A0J9YXS1 232 aa9.58□□□□□ -0.88
SP1-203ENST00000548560 K7ENM7 598 aa9.58□□□□□ -0.88
SP1-203ENST00000548560 K7ERI5 159 aa9.58□□□□□ -0.88
SP1-203ENST00000548560 ARHGEF15O94989 841 aa9.58□□□□□ -0.88
SP1-203ENST00000548560 FGFR1P11362 822 aa9.58□□□□□ -0.88
SP1-203ENST00000548560 ARF4P18085 180 aaPredicted RBP9.58□□□□□ -0.88
SP1-203ENST00000548560 IGFBP4P22692 258 aa9.58□□□□□ -0.88
SP1-203ENST00000548560 GATMP50440 423 aa9.58□□□□□ -0.88
SP1-203ENST00000548560 ERVK-21P61565 698 aa9.58□□□□□ -0.88
SP1-203ENST00000548560 FAM189BP81408 668 aa9.58□□□□□ -0.88
SP1-203ENST00000548560 STRN3Q13033 797 aa9.58□□□□□ -0.88
SP1-203ENST00000548560 MAPK7Q13164 816 aa9.58□□□□□ -0.88
SP1-203ENST00000548560 SLC27A1Q6PCB7 646 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms