RNA–Protein interactions for RNA: ENST00000548229.2

SVOP-202, Transcript of SV2 related protein, humanhuman

TSL 2

Gene SVOP, Length 597 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SVOP-202ENST00000548229 NUMBLQ9Y6R0 609 aa17.74■□□□□ 0.43
SVOP-202ENST00000548229 DOCK8Q8NF50 2099 aa17.74■□□□□ 0.43
SVOP-202ENST00000548229 KANSL1LA0AUZ9 987 aa17.73■□□□□ 0.43
SVOP-202ENST00000548229 NCLP19338 710 aaKnown RBP17.73■□□□□ 0.43
SVOP-202ENST00000548229 OR1G1P47890 313 aa17.73■□□□□ 0.43
SVOP-202ENST00000548229 EXOSC10Q01780 885 aaKnown RBP17.73■□□□□ 0.43
SVOP-202ENST00000548229 PFKPQ01813 784 aa17.73■□□□□ 0.43
SVOP-202ENST00000548229 GET4Q7L5D6 327 aaPredicted RBP17.73■□□□□ 0.43
SVOP-202ENST00000548229 RNF168Q8IYW5 571 aaPredicted RBP17.73■□□□□ 0.43
SVOP-202ENST00000548229 COLEC11Q9BWP8 271 aa17.73■□□□□ 0.43
SVOP-202ENST00000548229 FOXQ1Q9C009 403 aa17.73■□□□□ 0.43
SVOP-202ENST00000548229 IFT122Q9HBG6 1241 aa17.73■□□□□ 0.43
SVOP-202ENST00000548229 FNIP2Q9P278 1114 aa17.73■□□□□ 0.43
SVOP-202ENST00000548229 CDV3Q9UKY7 258 aaKnown RBP17.73■□□□□ 0.43
SVOP-202ENST00000548229 PRG3Q9Y2Y8 225 aaPredicted RBP17.73■□□□□ 0.43
SVOP-202ENST00000548229 CHD8Q9HCK8 2581 aa17.73■□□□□ 0.43
SVOP-202ENST00000548229 KLF18A0A0U1RQI7 1052 aa17.72■□□□□ 0.43
SVOP-202ENST00000548229 DDX11L8A8MPP1 907 aa17.72■□□□□ 0.43
SVOP-202ENST00000548229 EFEMP2O95967 443 aa17.72■□□□□ 0.43
SVOP-202ENST00000548229 GLULP15104 373 aa17.72■□□□□ 0.43
SVOP-202ENST00000548229 ATXN1P54253 815 aaKnown RBP17.72■□□□□ 0.43
SVOP-202ENST00000548229 AKAP17AQ02040 695 aaKnown RBP17.72■□□□□ 0.43
SVOP-202ENST00000548229 PCBP1Q15365 356 aaKnown RBP eCLIP17.72■□□□□ 0.43
SVOP-202ENST00000548229 MTSS1LQ765P7 747 aa17.72■□□□□ 0.43
SVOP-202ENST00000548229 TAS1R1Q7RTX1 841 aa17.72■□□□□ 0.43
SVOP-202ENST00000548229 COLGALT2Q8IYK4 626 aa17.72■□□□□ 0.43
SVOP-202ENST00000548229 MAML2Q8IZL2 1156 aaPredicted RBP17.72■□□□□ 0.43
SVOP-202ENST00000548229 CCDC148Q8NFR7 591 aa17.72■□□□□ 0.43
SVOP-202ENST00000548229 SLC7A3Q8WY07 619 aa17.72■□□□□ 0.43
SVOP-202ENST00000548229 NELL2Q99435 816 aa17.72■□□□□ 0.43
SVOP-202ENST00000548229 RTKNQ9BST9 563 aa17.72■□□□□ 0.43
SVOP-202ENST00000548229 CHST7Q9NS84 486 aa17.72■□□□□ 0.43
SVOP-202ENST00000548229 FAM217BQ9NTX9 383 aaPredicted RBP17.72■□□□□ 0.43
SVOP-202ENST00000548229 MARCH5Q9NX47 278 aa17.72■□□□□ 0.43
SVOP-202ENST00000548229 PPME1Q9Y570 386 aa17.72■□□□□ 0.43
SVOP-202ENST00000548229 COL4A3BPQ9Y5P4 624 aa17.72■□□□□ 0.43
SVOP-202ENST00000548229 CFAP47Q6ZTR5 3102 aa17.72■□□□□ 0.43
SVOP-202ENST00000548229 ZFHX4Q86UP3 3567 aa17.71■□□□□ 0.43
SVOP-202ENST00000548229 NCAM2O15394 837 aa17.71■□□□□ 0.43
SVOP-202ENST00000548229 TGM5O43548 720 aa17.71■□□□□ 0.43
SVOP-202ENST00000548229 DKC1O60832 514 aaKnown RBP eCLIP17.71■□□□□ 0.43
SVOP-202ENST00000548229 ITGA4P13612 1032 aa17.71■□□□□ 0.43
SVOP-202ENST00000548229 FSHRP23945 695 aa17.71■□□□□ 0.43
SVOP-202ENST00000548229 CDC27P30260 824 aa17.71■□□□□ 0.43
SVOP-202ENST00000548229 GPC5P78333 572 aa17.71■□□□□ 0.43
SVOP-202ENST00000548229 NCBP1Q09161 790 aaKnown RBP17.71■□□□□ 0.43
SVOP-202ENST00000548229 USP41Q3LFD5 358 aa17.71■□□□□ 0.43
SVOP-202ENST00000548229 PALB2Q86YC2 1186 aa17.71■□□□□ 0.43
SVOP-202ENST00000548229 KSR1Q8IVT5 923 aa17.71■□□□□ 0.43
SVOP-202ENST00000548229 ESYT1Q9BSJ8 1104 aa17.71■□□□□ 0.43
SVOP-202ENST00000548229 DDX23Q9BUQ8 820 aaKnown RBP17.71■□□□□ 0.43
SVOP-202ENST00000548229 C22orf23Q9BZE7 217 aa17.71■□□□□ 0.43
SVOP-202ENST00000548229 ANO2Q9NQ90 1003 aa17.71■□□□□ 0.43
SVOP-202ENST00000548229 ZSCAN32Q9NX65 697 aa17.71■□□□□ 0.43
SVOP-202ENST00000548229 CHD6Q8TD26 2715 aa17.71■□□□□ 0.42
SVOP-202ENST00000548229 POTEMA6NI47 508 aa17.7■□□□□ 0.42
SVOP-202ENST00000548229 PRPF3O43395 683 aaKnown RBP17.7■□□□□ 0.42
SVOP-202ENST00000548229 TBC1D4O60343 1298 aa17.7■□□□□ 0.42
SVOP-202ENST00000548229 PSMD10O75832 226 aa17.7■□□□□ 0.42
SVOP-202ENST00000548229 STBD1O95210 358 aa17.7■□□□□ 0.42
SVOP-202ENST00000548229 HMGB1P09429 215 aaKnown RBP17.7■□□□□ 0.42
SVOP-202ENST00000548229 SPATA31D3P0C874 917 aa17.7■□□□□ 0.42
SVOP-202ENST00000548229 HOXA11P31270 313 aaPredicted RBP17.7■□□□□ 0.42
SVOP-202ENST00000548229 ADD1P35611 737 aaKnown RBP17.7■□□□□ 0.42
SVOP-202ENST00000548229 AFF1P51825 1210 aaKnown RBP17.7■□□□□ 0.42
SVOP-202ENST00000548229 PSMC5P62195 406 aa17.7■□□□□ 0.42
SVOP-202ENST00000548229 FGD1P98174 961 aa17.7■□□□□ 0.42
SVOP-202ENST00000548229 Q4G0T1 1027 aa17.7■□□□□ 0.42
SVOP-202ENST00000548229 POTEGQ6S5H5 508 aa17.7■□□□□ 0.42
SVOP-202ENST00000548229 SPATA31D4Q6ZUB0 917 aa17.7■□□□□ 0.42
SVOP-202ENST00000548229 HACE1Q8IYU2 909 aa17.7■□□□□ 0.42
SVOP-202ENST00000548229 ZBTB44Q8NCP5 570 aa17.7■□□□□ 0.42
SVOP-202ENST00000548229 PSPC1Q8WXF1 523 aaKnown RBP17.7■□□□□ 0.42
SVOP-202ENST00000548229 CCDC51Q96ER9 411 aa17.7■□□□□ 0.42
SVOP-202ENST00000548229 FAM126AQ9BYI3 521 aaPredicted RBP17.7■□□□□ 0.42
SVOP-202ENST00000548229 CDH7Q9ULB5 785 aa17.7■□□□□ 0.42
SVOP-202ENST00000548229 NAP1L2Q9ULW6 460 aaPredicted RBP17.7■□□□□ 0.42
SVOP-202ENST00000548229 MTCL1Q9Y4B5 1905 aaKnown RBP17.69■□□□□ 0.42
SVOP-202ENST00000548229 ARL5CA6NH57 179 aa17.69■□□□□ 0.42
SVOP-202ENST00000548229 ASAP2O43150 1006 aa17.69■□□□□ 0.42
SVOP-202ENST00000548229 ZMYND10O75800 440 aa17.69■□□□□ 0.42
SVOP-202ENST00000548229 HNRNPA1P09651 372 aaKnown RBP eCLIP17.69■□□□□ 0.42
SVOP-202ENST00000548229 MYBP10242 640 aa17.69■□□□□ 0.42
SVOP-202ENST00000548229 AXLP30530 894 aa17.69■□□□□ 0.42
SVOP-202ENST00000548229 CSTF1Q05048 431 aaKnown RBP17.69■□□□□ 0.42
SVOP-202ENST00000548229 DSC1Q08554 894 aa17.69■□□□□ 0.42
SVOP-202ENST00000548229 SNW1Q13573 536 aaKnown RBP17.69■□□□□ 0.42
SVOP-202ENST00000548229 KRT32Q14532 448 aa17.69■□□□□ 0.42
SVOP-202ENST00000548229 UBXN2BQ14CS0 331 aa17.69■□□□□ 0.42
SVOP-202ENST00000548229 MLF2Q15773 248 aaPredicted RBP17.69■□□□□ 0.42
SVOP-202ENST00000548229 SLC44A4Q53GD3 710 aa17.69■□□□□ 0.42
SVOP-202ENST00000548229 ZBTB41Q5SVQ8 909 aa17.69■□□□□ 0.42
SVOP-202ENST00000548229 LILRA6Q6PI73 481 aa17.69■□□□□ 0.42
SVOP-202ENST00000548229 EPC1Q9H2F5 836 aa17.69■□□□□ 0.42
SVOP-202ENST00000548229 CACNA1GO43497 2377 aa17.69■□□□□ 0.42
SVOP-202ENST00000548229 TMEM150BA6NC51 233 aa17.68■□□□□ 0.42
SVOP-202ENST00000548229 FAM170BA6NMN3 283 aa17.68■□□□□ 0.42
SVOP-202ENST00000548229 ERLIN2O94905 339 aa17.68■□□□□ 0.42
SVOP-202ENST00000548229 SRGAP2CP0DJJ0 459 aa17.68■□□□□ 0.42
SVOP-202ENST00000548229 UBXN11Q5T124 520 aa17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms