RNA–Protein interactions for RNA: ENST00000547988.5

CALCOCO1-208, Transcript of calcium binding and coiled-coil domain 1, humanhuman

TSL 1 (best)

Gene CALCOCO1, Length 1,277 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO1-208ENST00000547988 APBB1IPQ7Z5R6 666 aaPredicted RBP12.5□□□□□ -0.41
CALCOCO1-208ENST00000547988 ECHDC2Q86YB7 292 aa12.5□□□□□ -0.41
CALCOCO1-208ENST00000547988 RSPH1Q8WYR4 309 aa12.5□□□□□ -0.41
CALCOCO1-208ENST00000547988 ADPGKQ9BRR6 497 aa12.5□□□□□ -0.41
CALCOCO1-208ENST00000547988 ZBED2Q9BTP6 218 aa12.5□□□□□ -0.41
CALCOCO1-208ENST00000547988 PDZD7Q9H5P4 517 aa12.5□□□□□ -0.41
CALCOCO1-208ENST00000547988 HOOK1Q9UJC3 728 aaKnown RBP12.5□□□□□ -0.41
CALCOCO1-208ENST00000547988 TBX20Q9UMR3 447 aa12.5□□□□□ -0.41
CALCOCO1-208ENST00000547988 INSL6Q9Y581 213 aa12.5□□□□□ -0.41
CALCOCO1-208ENST00000547988 PCDHB2Q9Y5E7 798 aa12.5□□□□□ -0.41
CALCOCO1-208ENST00000547988 PCDHA11Q9Y5I1 949 aa12.5□□□□□ -0.41
CALCOCO1-208ENST00000547988 PLXNA4Q9HCM2 1894 aa12.5□□□□□ -0.41
CALCOCO1-208ENST00000547988 ATG2AQ2TAZ0 1938 aa12.49□□□□□ -0.41
CALCOCO1-208ENST00000547988 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.49□□□□□ -0.41
CALCOCO1-208ENST00000547988 TTLL13PA6NNM8 815 aa12.49□□□□□ -0.41
CALCOCO1-208ENST00000547988 GRXCR1A8MXD5 290 aa12.49□□□□□ -0.41
CALCOCO1-208ENST00000547988 HOXA2O43364 376 aa12.49□□□□□ -0.41
CALCOCO1-208ENST00000547988 TLL1O43897 1013 aa12.49□□□□□ -0.41
CALCOCO1-208ENST00000547988 KINO60870 393 aaKnown RBP12.49□□□□□ -0.41
CALCOCO1-208ENST00000547988 DGKIO75912 1065 aa12.49□□□□□ -0.41
CALCOCO1-208ENST00000547988 GCNT3O95395 438 aa12.49□□□□□ -0.41
CALCOCO1-208ENST00000547988 PIGRP01833 764 aa12.49□□□□□ -0.41
CALCOCO1-208ENST00000547988 ATF7P17544 494 aaPredicted RBP12.49□□□□□ -0.41
CALCOCO1-208ENST00000547988 CASP1P29466 404 aa12.49□□□□□ -0.41
CALCOCO1-208ENST00000547988 DPYDQ12882 1025 aa12.49□□□□□ -0.41
CALCOCO1-208ENST00000547988 POSTNQ15063 836 aa12.49□□□□□ -0.41
CALCOCO1-208ENST00000547988 DCAF4L1Q3SXM0 396 aa12.49□□□□□ -0.41
CALCOCO1-208ENST00000547988 FAM26FQ5R3K3 315 aa12.49□□□□□ -0.41
CALCOCO1-208ENST00000547988 UBXN11Q5T124 520 aa12.49□□□□□ -0.41
CALCOCO1-208ENST00000547988 NT5DC1Q5TFE4 455 aa12.49□□□□□ -0.41
CALCOCO1-208ENST00000547988 TMCO2Q7Z6W1 182 aaPredicted RBP12.49□□□□□ -0.41
CALCOCO1-208ENST00000547988 ZNF598Q86UK7 904 aaKnown RBP12.49□□□□□ -0.41
CALCOCO1-208ENST00000547988 MAP4K3Q8IVH8 894 aa12.49□□□□□ -0.41
CALCOCO1-208ENST00000547988 ELOA2Q8IYF1 753 aaPredicted RBP12.49□□□□□ -0.41
CALCOCO1-208ENST00000547988 HACE1Q8IYU2 909 aa12.49□□□□□ -0.41
CALCOCO1-208ENST00000547988 CCDC47Q96A33 483 aaKnown RBP12.49□□□□□ -0.41
CALCOCO1-208ENST00000547988 PGBD4Q96DM1 585 aa12.49□□□□□ -0.41
CALCOCO1-208ENST00000547988 RAD9AQ99638 391 aa12.49□□□□□ -0.41
CALCOCO1-208ENST00000547988 ACO2Q99798 780 aaKnown RBP12.49□□□□□ -0.41
CALCOCO1-208ENST00000547988 STRA6Q9BX79 667 aa12.49□□□□□ -0.41
CALCOCO1-208ENST00000547988 PBX4Q9BYU1 374 aa12.49□□□□□ -0.41
CALCOCO1-208ENST00000547988 TRIM6Q9C030 488 aaPredicted RBP12.49□□□□□ -0.41
CALCOCO1-208ENST00000547988 RC3H2Q9HBD1 1191 aaKnown RBP12.49□□□□□ -0.41
CALCOCO1-208ENST00000547988 TBC1D7Q9P0N9 293 aa12.49□□□□□ -0.41
CALCOCO1-208ENST00000547988 MSRAQ9UJ68 235 aa12.49□□□□□ -0.41
CALCOCO1-208ENST00000547988 TNFSF13BQ9Y275 285 aa12.49□□□□□ -0.41
CALCOCO1-208ENST00000547988 PCDHB13Q9Y5F0 798 aa12.49□□□□□ -0.41
CALCOCO1-208ENST00000547988 ZMYM2Q9UBW7 1377 aa12.48□□□□□ -0.41
CALCOCO1-208ENST00000547988 UBE4BO95155 1302 aa12.48□□□□□ -0.41
CALCOCO1-208ENST00000547988 HNRNPDLO14979 420 aaKnown RBP12.48□□□□□ -0.41
CALCOCO1-208ENST00000547988 EIF3DO15371 548 aaKnown RBP eCLIP12.48□□□□□ -0.41
CALCOCO1-208ENST00000547988 KLRC4O43908 158 aa12.48□□□□□ -0.41
CALCOCO1-208ENST00000547988 TOM1L1O75674 476 aa12.48□□□□□ -0.41
CALCOCO1-208ENST00000547988 RPN1P04843 607 aaKnown RBP12.48□□□□□ -0.41
CALCOCO1-208ENST00000547988 PRR29P0C7W0 189 aa12.48□□□□□ -0.41
CALCOCO1-208ENST00000547988 PROZP22891 400 aa12.48□□□□□ -0.41
CALCOCO1-208ENST00000547988 RABGGTBP53611 331 aa12.48□□□□□ -0.41
CALCOCO1-208ENST00000547988 PSMD2Q13200 908 aa12.48□□□□□ -0.41
CALCOCO1-208ENST00000547988 ZC2HC1CQ53FD0 456 aaPredicted RBP12.48□□□□□ -0.41
CALCOCO1-208ENST00000547988 L1TD1Q5T7N2 865 aaKnown RBP12.48□□□□□ -0.41
CALCOCO1-208ENST00000547988 FAM117BQ6P1L5 589 aa12.48□□□□□ -0.41
CALCOCO1-208ENST00000547988 MPZL3Q6UWV2 235 aa12.48□□□□□ -0.41
CALCOCO1-208ENST00000547988 MRPL10Q7Z7H8 261 aaKnown RBP12.48□□□□□ -0.41
CALCOCO1-208ENST00000547988 SP7Q8TDD2 431 aaPredicted RBP12.48□□□□□ -0.41
CALCOCO1-208ENST00000547988 ZNF689Q96CS4 500 aaPredicted RBP12.48□□□□□ -0.41
CALCOCO1-208ENST00000547988 BICD1Q96G01 975 aa12.48□□□□□ -0.41
CALCOCO1-208ENST00000547988 YME1L1Q96TA2 773 aa12.48□□□□□ -0.41
CALCOCO1-208ENST00000547988 TARS2Q9BW92 718 aaKnown RBP12.48□□□□□ -0.41
CALCOCO1-208ENST00000547988 EIF2AQ9BY44 585 aaKnown RBP12.48□□□□□ -0.41
CALCOCO1-208ENST00000547988 PTPRHQ9HD43 1115 aa12.48□□□□□ -0.41
CALCOCO1-208ENST00000547988 LMBRD1Q9NUN5 540 aa12.48□□□□□ -0.41
CALCOCO1-208ENST00000547988 EXOC1Q9NV70 894 aa12.48□□□□□ -0.41
CALCOCO1-208ENST00000547988 EXOC7Q9UPT5 735 aa12.48□□□□□ -0.41
CALCOCO1-208ENST00000547988 IPPQ9Y573 584 aa12.48□□□□□ -0.41
CALCOCO1-208ENST00000547988 TMEM265A0A087WTH1 108 aa12.47□□□□□ -0.41
CALCOCO1-208ENST00000547988 NPTXRO95502 500 aa12.47□□□□□ -0.41
CALCOCO1-208ENST00000547988 MYBP10242 640 aa12.47□□□□□ -0.41
CALCOCO1-208ENST00000547988 IBSPP21815 317 aaPredicted RBP12.47□□□□□ -0.41
CALCOCO1-208ENST00000547988 DNAJB2P25686 324 aa12.47□□□□□ -0.41
CALCOCO1-208ENST00000547988 LIG4P49917 911 aa12.47□□□□□ -0.41
CALCOCO1-208ENST00000547988 CASP5P51878 434 aa12.47□□□□□ -0.41
CALCOCO1-208ENST00000547988 KCNB1Q14721 858 aa12.47□□□□□ -0.41
CALCOCO1-208ENST00000547988 ZNF568Q3ZCX4 644 aa12.47□□□□□ -0.41
CALCOCO1-208ENST00000547988 KMT5BQ4FZB7 885 aa12.47□□□□□ -0.41
CALCOCO1-208ENST00000547988 CDR2LQ86X02 465 aaPredicted RBP12.47□□□□□ -0.41
CALCOCO1-208ENST00000547988 CMTR2Q8IYT2 770 aaKnown RBP12.47□□□□□ -0.41
CALCOCO1-208ENST00000547988 ABI1Q8IZP0 508 aa12.47□□□□□ -0.41
CALCOCO1-208ENST00000547988 SMG8Q8ND04 991 aaKnown RBP12.47□□□□□ -0.41
CALCOCO1-208ENST00000547988 ACCSQ96QU6 501 aa12.47□□□□□ -0.41
CALCOCO1-208ENST00000547988 TMEM206Q9H813 350 aa12.47□□□□□ -0.41
CALCOCO1-208ENST00000547988 UBN1Q9NPG3 1134 aa12.47□□□□□ -0.41
CALCOCO1-208ENST00000547988 USP20Q9Y2K6 914 aa12.47□□□□□ -0.41
CALCOCO1-208ENST00000547988 SOX1O00570 391 aaPredicted RBP12.46□□□□□ -0.41
CALCOCO1-208ENST00000547988 ABLIM1O14639 778 aa12.46□□□□□ -0.41
CALCOCO1-208ENST00000547988 CLDN3O15551 220 aa12.46□□□□□ -0.41
CALCOCO1-208ENST00000547988 RHOBTB3O94955 611 aa12.46□□□□□ -0.41
CALCOCO1-208ENST00000547988 SMC2O95347 1197 aa12.46□□□□□ -0.41
CALCOCO1-208ENST00000547988 MCF2P10911 925 aa12.46□□□□□ -0.41
CALCOCO1-208ENST00000547988 ITGA4P13612 1032 aa12.46□□□□□ -0.41
CALCOCO1-208ENST00000547988 PBX2P40425 430 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms