RNA–Protein interactions for RNA: ENST00000547758.1

CCDC59-202, Transcript of coiled-coil domain containing 59, humanhuman

TSL 2

Gene CCDC59, Length 553 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC59-202ENST00000547758 NECTIN1Q15223 517 aa15.13■□□□□ 0.01
CCDC59-202ENST00000547758 ZNF707Q96C28 371 aaPredicted RBP15.13■□□□□ 0.01
CCDC59-202ENST00000547758 NLRP4Q96MN2 994 aa15.13■□□□□ 0.01
CCDC59-202ENST00000547758 CEP89Q96ST8 783 aa15.13■□□□□ 0.01
CCDC59-202ENST00000547758 NIFKQ9BYG3 293 aaKnown RBP15.13■□□□□ 0.01
CCDC59-202ENST00000547758 FOXQ1Q9C009 403 aa15.13■□□□□ 0.01
CCDC59-202ENST00000547758 UNC45AQ9H3U1 944 aa15.13■□□□□ 0.01
CCDC59-202ENST00000547758 C6orf50Q9HD87 102 aa15.13■□□□□ 0.01
CCDC59-202ENST00000547758 SLC2A4RGQ9NR83 387 aa15.13■□□□□ 0.01
CCDC59-202ENST00000547758 FAM217BQ9NTX9 383 aaPredicted RBP15.13■□□□□ 0.01
CCDC59-202ENST00000547758 AGPAT5Q9NUQ2 364 aa15.13■□□□□ 0.01
CCDC59-202ENST00000547758 MARCH5Q9NX47 278 aa15.13■□□□□ 0.01
CCDC59-202ENST00000547758 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP15.13■□□□□ 0.01
CCDC59-202ENST00000547758 KANSL3Q9P2N6 904 aa15.13■□□□□ 0.01
CCDC59-202ENST00000547758 SUCLA2Q9P2R7 463 aaPredicted RBP15.13■□□□□ 0.01
CCDC59-202ENST00000547758 ZFHX4Q86UP3 3567 aa15.13■□□□□ 0.01
CCDC59-202ENST00000547758 CNTNAP2Q9UHC6 1331 aa15.13■□□□□ 0.01
CCDC59-202ENST00000547758 COL4A3Q01955 1670 aa15.12■□□□□ 0.01
CCDC59-202ENST00000547758 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.12■□□□□ 0.01
CCDC59-202ENST00000547758 TMEM150BA6NC51 233 aa15.12■□□□□ 0.01
CCDC59-202ENST00000547758 ANHXE9PGG2 379 aa15.12■□□□□ 0.01
CCDC59-202ENST00000547758 PAPLNO95428 1278 aa15.12■□□□□ 0.01
CCDC59-202ENST00000547758 LAMP2P13473 410 aa15.12■□□□□ 0.01
CCDC59-202ENST00000547758 CDC27P30260 824 aa15.12■□□□□ 0.01
CCDC59-202ENST00000547758 GLUD2P49448 558 aa15.12■□□□□ 0.01
CCDC59-202ENST00000547758 HTR4Q13639 388 aa15.12■□□□□ 0.01
CCDC59-202ENST00000547758 XKR3Q5GH77 459 aa15.12■□□□□ 0.01
CCDC59-202ENST00000547758 GET4Q7L5D6 327 aaPredicted RBP15.12■□□□□ 0.01
CCDC59-202ENST00000547758 TAS1R1Q7RTX1 841 aa15.12■□□□□ 0.01
CCDC59-202ENST00000547758 MRPL10Q7Z7H8 261 aaKnown RBP15.12■□□□□ 0.01
CCDC59-202ENST00000547758 KSR1Q8IVT5 923 aa15.12■□□□□ 0.01
CCDC59-202ENST00000547758 MAML2Q8IZL2 1156 aaPredicted RBP15.12■□□□□ 0.01
CCDC59-202ENST00000547758 CCDC12Q8WUD4 166 aaPredicted RBP15.12■□□□□ 0.01
CCDC59-202ENST00000547758 TCEANC2Q96MN5 208 aa15.12■□□□□ 0.01
CCDC59-202ENST00000547758 RIT2Q99578 217 aa15.12■□□□□ 0.01
CCDC59-202ENST00000547758 TEKT3Q9BXF9 490 aa15.12■□□□□ 0.01
CCDC59-202ENST00000547758 PIDD1Q9HB75 910 aa15.12■□□□□ 0.01
CCDC59-202ENST00000547758 PRG3Q9Y2Y8 225 aaPredicted RBP15.12■□□□□ 0.01
CCDC59-202ENST00000547758 NUMBLQ9Y6R0 609 aa15.12■□□□□ 0.01
CCDC59-202ENST00000547758 CHD8Q9HCK8 2581 aa15.11■□□□□ 0.01
CCDC59-202ENST00000547758 ARID2Q68CP9 1835 aa15.11■□□□□ 0.01
CCDC59-202ENST00000547758 POMCP01189 267 aa15.11■□□□□ 0.01
CCDC59-202ENST00000547758 SPATA31D3P0C874 917 aa15.11■□□□□ 0.01
CCDC59-202ENST00000547758 GNA11P29992 359 aa15.11■□□□□ 0.01
CCDC59-202ENST00000547758 STARD6P59095 220 aa15.11■□□□□ 0.01
CCDC59-202ENST00000547758 ZNF528Q3MIS6 628 aa15.11■□□□□ 0.01
CCDC59-202ENST00000547758 LRCH2Q5VUJ6 765 aa15.11■□□□□ 0.01
CCDC59-202ENST00000547758 KIAA0319Q5VV43 1072 aa15.11■□□□□ 0.01
CCDC59-202ENST00000547758 SPATA31D4Q6ZUB0 917 aa15.11■□□□□ 0.01
CCDC59-202ENST00000547758 RNF168Q8IYW5 571 aaPredicted RBP15.11■□□□□ 0.01
CCDC59-202ENST00000547758 RDM1Q8NG50 284 aa15.11■□□□□ 0.01
CCDC59-202ENST00000547758 HDAC7Q8WUI4 952 aa15.11■□□□□ 0.01
CCDC59-202ENST00000547758 SLC5A5Q92911 643 aa15.11■□□□□ 0.01
CCDC59-202ENST00000547758 SHDQ96IW2 340 aa15.11■□□□□ 0.01
CCDC59-202ENST00000547758 SH2D3AQ9BRG2 576 aa15.11■□□□□ 0.01
CCDC59-202ENST00000547758 NT5C3AQ9H0P0 336 aa15.11■□□□□ 0.01
CCDC59-202ENST00000547758 RXFP1Q9HBX9 757 aa15.11■□□□□ 0.01
CCDC59-202ENST00000547758 NCDNQ9UBB6 729 aa15.11■□□□□ 0.01
CCDC59-202ENST00000547758 KLF18A0A0U1RQI7 1052 aa15.1■□□□□ 0.01
CCDC59-202ENST00000547758 SPTLC1O15269 473 aa15.1■□□□□ 0.01
CCDC59-202ENST00000547758 LRRN2O75325 713 aa15.1■□□□□ 0.01
CCDC59-202ENST00000547758 MAFO75444 373 aaPredicted RBP15.1■□□□□ 0.01
CCDC59-202ENST00000547758 STBD1O95210 358 aa15.1■□□□□ 0.01
CCDC59-202ENST00000547758 SDHBP21912 280 aa15.1■□□□□ 0.01
CCDC59-202ENST00000547758 OR1G1P47890 313 aa15.1■□□□□ 0.01
CCDC59-202ENST00000547758 VARS2Q5ST30 1063 aaKnown RBP15.1■□□□□ 0.01
CCDC59-202ENST00000547758 MIER3Q7Z3K6 550 aa15.1■□□□□ 0.01
CCDC59-202ENST00000547758 PHKBQ93100 1093 aa15.1■□□□□ 0.01
CCDC59-202ENST00000547758 GJA10Q969M2 543 aa15.1■□□□□ 0.01
CCDC59-202ENST00000547758 BORCS6Q96GS4 357 aa15.1■□□□□ 0.01
CCDC59-202ENST00000547758 CCDC136Q96JN2 1154 aa15.1■□□□□ 0.01
CCDC59-202ENST00000547758 PLEKHA4Q9H4M7 779 aa15.1■□□□□ 0.01
CCDC59-202ENST00000547758 IFT122Q9HBG6 1241 aa15.1■□□□□ 0.01
CCDC59-202ENST00000547758 ZDHHC7Q9NXF8 308 aa15.1■□□□□ 0.01
CCDC59-202ENST00000547758 EDIL3O43854 480 aa15.09■□□□□ 0.01
CCDC59-202ENST00000547758 EFEMP2O95967 443 aa15.09■□□□□ 0.01
CCDC59-202ENST00000547758 RCAN1P53805 252 aa15.09■□□□□ 0.01
CCDC59-202ENST00000547758 EXOSC10Q01780 885 aaKnown RBP15.09■□□□□ 0.01
CCDC59-202ENST00000547758 DSG1Q02413 1049 aa15.09■□□□□ 0.01
CCDC59-202ENST00000547758 UBXN11Q5T124 520 aa15.09■□□□□ 0.01
CCDC59-202ENST00000547758 PALB2Q86YC2 1186 aa15.09■□□□□ 0.01
CCDC59-202ENST00000547758 COLGALT2Q8IYK4 626 aa15.09■□□□□ 0.01
CCDC59-202ENST00000547758 GPR161Q8N6U8 529 aaKnown RBP15.09■□□□□ 0.01
CCDC59-202ENST00000547758 ST13P5Q8NFI4 369 aaPredicted RBP15.09■□□□□ 0.01
CCDC59-202ENST00000547758 BICD2Q8TD16 824 aa15.09■□□□□ 0.01
CCDC59-202ENST00000547758 JPH2Q9BR39 696 aaPredicted RBP15.09■□□□□ 0.01
CCDC59-202ENST00000547758 ESYT1Q9BSJ8 1104 aa15.09■□□□□ 0.01
CCDC59-202ENST00000547758 BCO2Q9BYV7 579 aa15.09■□□□□ 0.01
CCDC59-202ENST00000547758 PRKD2Q9BZL6 878 aa15.09■□□□□ 0.01
CCDC59-202ENST00000547758 ANO2Q9NQ90 1003 aa15.09■□□□□ 0.01
CCDC59-202ENST00000547758 SPATA6Q9NWH7 488 aaPredicted RBP15.09■□□□□ 0.01
CCDC59-202ENST00000547758 FBXO4Q9UKT5 387 aa15.09■□□□□ 0.01
CCDC59-202ENST00000547758 RALGAPA1Q6GYQ0 2036 aa15.09■□□□□ 0.01
CCDC59-202ENST00000547758 CACNA1GO43497 2377 aa15.09■□□□□ 0.01
CCDC59-202ENST00000547758 KANSL1LA0AUZ9 987 aa15.08■□□□□ 0
CCDC59-202ENST00000547758 LAMTOR5O43504 91 aa15.08■□□□□ 0
CCDC59-202ENST00000547758 TGM5O43548 720 aa15.08■□□□□ 0
CCDC59-202ENST00000547758 GAS2O43903 313 aaKnown RBP15.08■□□□□ 0
CCDC59-202ENST00000547758 PSMD10O75832 226 aa15.08■□□□□ 0
CCDC59-202ENST00000547758 C1RP00736 705 aa15.08■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms