RNA–Protein interactions for RNA: ENST00000547637.1

SMARCD1-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 2

Gene SMARCD1, Length 587 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-204ENST00000547637 UBXN11Q5T124 520 aa25.68■■□□□ 1.7
SMARCD1-204ENST00000547637 C15orf39Q6ZRI6 1047 aa25.68■■□□□ 1.7
SMARCD1-204ENST00000547637 OXER1Q8TDS5 423 aa25.68■■□□□ 1.7
SMARCD1-204ENST00000547637 PHOX2BQ99453 314 aa25.68■■□□□ 1.7
SMARCD1-204ENST00000547637 SLITRK3O94933 977 aa25.67■■□□□ 1.7
SMARCD1-204ENST00000547637 ASGR2P07307 311 aa25.67■■□□□ 1.7
SMARCD1-204ENST00000547637 ANAPC15P60006 121 aa25.67■■□□□ 1.7
SMARCD1-204ENST00000547637 KANK3Q6NY19 840 aa25.67■■□□□ 1.7
SMARCD1-204ENST00000547637 CYP26C1Q6V0L0 522 aa25.67■■□□□ 1.7
SMARCD1-204ENST00000547637 COLEC11Q9BWP8 271 aa25.67■■□□□ 1.7
SMARCD1-204ENST00000547637 CSRNP2Q9H175 543 aa25.67■■□□□ 1.7
SMARCD1-204ENST00000547637 ANKEF1Q9NU02 776 aa25.67■■□□□ 1.7
SMARCD1-204ENST00000547637 IPPQ9Y573 584 aa25.67■■□□□ 1.7
SMARCD1-204ENST00000547637 C2CD2LO14523 706 aa25.66■■□□□ 1.7
SMARCD1-204ENST00000547637 GALR2O43603 387 aaPredicted RBP25.66■■□□□ 1.7
SMARCD1-204ENST00000547637 PDGFBP01127 241 aaPredicted RBP25.66■■□□□ 1.7
SMARCD1-204ENST00000547637 TRIM29Q14134 588 aa25.66■■□□□ 1.7
SMARCD1-204ENST00000547637 CALCRLQ16602 461 aa25.66■■□□□ 1.7
SMARCD1-204ENST00000547637 STAMQ92783 540 aa25.66■■□□□ 1.7
SMARCD1-204ENST00000547637 EIF2AK1Q9BQI3 630 aaKnown RBP25.66■■□□□ 1.7
SMARCD1-204ENST00000547637 HERC2P3Q9BVR0 1158 aa25.66■■□□□ 1.7
SMARCD1-204ENST00000547637 GIT1Q9Y2X7 761 aa25.66■■□□□ 1.7
SMARCD1-204ENST00000547637 PRG3Q9Y2Y8 225 aaPredicted RBP25.66■■□□□ 1.7
SMARCD1-204ENST00000547637 ARL5CA6NH57 179 aa25.65■■□□□ 1.7
SMARCD1-204ENST00000547637 EIF5BO60841 1220 aaKnown RBP25.65■■□□□ 1.7
SMARCD1-204ENST00000547637 LYPLA2O95372 231 aa25.65■■□□□ 1.7
SMARCD1-204ENST00000547637 GLUD2P49448 558 aa25.65■■□□□ 1.7
SMARCD1-204ENST00000547637 SPIRE1Q08AE8 756 aa25.65■■□□□ 1.7
SMARCD1-204ENST00000547637 ASTLQ6HA08 431 aaPredicted RBP25.65■■□□□ 1.7
SMARCD1-204ENST00000547637 IFNLR1Q8IU57 520 aaPredicted RBP25.65■■□□□ 1.7
SMARCD1-204ENST00000547637 COLGALT2Q8IYK4 626 aa25.65■■□□□ 1.7
SMARCD1-204ENST00000547637 SMG8Q8ND04 991 aaKnown RBP25.65■■□□□ 1.7
SMARCD1-204ENST00000547637 RPS6KC1Q96S38 1066 aa25.65■■□□□ 1.7
SMARCD1-204ENST00000547637 GAD1Q99259 594 aa25.65■■□□□ 1.7
SMARCD1-204ENST00000547637 VN1R3Q9BXE9 311 aa25.65■■□□□ 1.7
SMARCD1-204ENST00000547637 TTC12Q9H892 705 aaPredicted RBP25.65■■□□□ 1.7
SMARCD1-204ENST00000547637 GJB4Q9NTQ9 266 aa25.65■■□□□ 1.7
SMARCD1-204ENST00000547637 WDFY4Q6ZS81 3184 aa25.64■■□□□ 1.7
SMARCD1-204ENST00000547637 H0Y858 1186 aa25.64■■□□□ 1.7
SMARCD1-204ENST00000547637 TSPAN1O60635 241 aa25.64■■□□□ 1.7
SMARCD1-204ENST00000547637 LILRB3O75022 631 aa25.64■■□□□ 1.7
SMARCD1-204ENST00000547637 GLUD1P00367 558 aa25.64■■□□□ 1.7
SMARCD1-204ENST00000547637 XRCC6P12956 609 aaKnown RBP eCLIP25.64■■□□□ 1.7
SMARCD1-204ENST00000547637 AFF1P51825 1210 aaKnown RBP25.64■■□□□ 1.7
SMARCD1-204ENST00000547637 TDGQ13569 410 aa25.64■■□□□ 1.7
SMARCD1-204ENST00000547637 ZBTB39O15060 712 aa25.63■■□□□ 1.69
SMARCD1-204ENST00000547637 INPPL1O15357 1258 aa25.63■■□□□ 1.69
SMARCD1-204ENST00000547637 B4GALT3O60512 393 aa25.63■■□□□ 1.69
SMARCD1-204ENST00000547637 GFRA3O60609 400 aa25.63■■□□□ 1.69
SMARCD1-204ENST00000547637 NEFLP07196 543 aa25.63■■□□□ 1.69
SMARCD1-204ENST00000547637 MLH1P40692 756 aa25.63■■□□□ 1.69
SMARCD1-204ENST00000547637 CLCN5P51795 746 aa25.63■■□□□ 1.69
SMARCD1-204ENST00000547637 NR5A1Q13285 461 aa25.63■■□□□ 1.69
SMARCD1-204ENST00000547637 CMASQ8NFW8 434 aaPredicted RBP25.63■■□□□ 1.69
SMARCD1-204ENST00000547637 CPB2Q96IY4 423 aa25.63■■□□□ 1.69
SMARCD1-204ENST00000547637 HSD17B14Q9BPX1 270 aa25.63■■□□□ 1.69
SMARCD1-204ENST00000547637 APOL6Q9BWW8 343 aa25.63■■□□□ 1.69
SMARCD1-204ENST00000547637 EIF2AQ9BY44 585 aaKnown RBP25.63■■□□□ 1.69
SMARCD1-204ENST00000547637 NFKBIZQ9BYH8 718 aa25.63■■□□□ 1.69
SMARCD1-204ENST00000547637 MAN1C1Q9NR34 630 aa25.63■■□□□ 1.69
SMARCD1-204ENST00000547637 FAM86C1Q9NVL1 165 aa25.63■■□□□ 1.69
SMARCD1-204ENST00000547637 IGSF9Q9P2J2 1179 aa25.63■■□□□ 1.69
SMARCD1-204ENST00000547637 NEMFO60524 1076 aa25.62■■□□□ 1.69
SMARCD1-204ENST00000547637 C1RP00736 705 aa25.62■■□□□ 1.69
SMARCD1-204ENST00000547637 TXKP42681 527 aa25.62■■□□□ 1.69
SMARCD1-204ENST00000547637 EARS2Q5JPH6 523 aaKnown RBP25.62■■□□□ 1.69
SMARCD1-204ENST00000547637 HDAC7Q8WUI4 952 aa25.62■■□□□ 1.69
SMARCD1-204ENST00000547637 XPNPEP1Q9NQW7 623 aa25.62■■□□□ 1.69
SMARCD1-204ENST00000547637 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP25.62■■□□□ 1.69
SMARCD1-204ENST00000547637 FBXL21Q9UKT6 434 aa25.62■■□□□ 1.69
SMARCD1-204ENST00000547637 CACNA1HO95180 2353 aa25.61■■□□□ 1.69
SMARCD1-204ENST00000547637 CCDC195A0A1B0GUA6 201 aa25.61■■□□□ 1.69
SMARCD1-204ENST00000547637 CTDNEP1O95476 244 aa25.61■■□□□ 1.69
SMARCD1-204ENST00000547637 ARL2P36404 184 aa25.61■■□□□ 1.69
SMARCD1-204ENST00000547637 SCNN1GP51170 649 aa25.61■■□□□ 1.69
SMARCD1-204ENST00000547637 CREMQ03060 361 aa25.61■■□□□ 1.69
SMARCD1-204ENST00000547637 DSC1Q08554 894 aa25.61■■□□□ 1.69
SMARCD1-204ENST00000547637 SLC27A1Q6PCB7 646 aa25.61■■□□□ 1.69
SMARCD1-204ENST00000547637 RHOBTB2Q9BYZ6 727 aa25.61■■□□□ 1.69
SMARCD1-204ENST00000547637 TEX28O15482 410 aa25.6■■□□□ 1.69
SMARCD1-204ENST00000547637 ARF4P18085 180 aaPredicted RBP25.6■■□□□ 1.69
SMARCD1-204ENST00000547637 GBP2P32456 591 aaPredicted RBP25.6■■□□□ 1.69
SMARCD1-204ENST00000547637 RARRES1P49788 294 aa25.6■■□□□ 1.69
SMARCD1-204ENST00000547637 MBTD1Q05BQ5 628 aa25.6■■□□□ 1.69
SMARCD1-204ENST00000547637 CAPSQ13938 189 aa25.6■■□□□ 1.69
SMARCD1-204ENST00000547637 USP41Q3LFD5 358 aa25.6■■□□□ 1.69
SMARCD1-204ENST00000547637 KIAA0319Q5VV43 1072 aa25.6■■□□□ 1.69
SMARCD1-204ENST00000547637 FLCNQ8NFG4 579 aa25.6■■□□□ 1.69
SMARCD1-204ENST00000547637 RNF39Q9H2S5 420 aa25.6■■□□□ 1.69
SMARCD1-204ENST00000547637 PLEKHA4Q9H4M7 779 aa25.6■■□□□ 1.69
SMARCD1-204ENST00000547637 KCNK12Q9HB15 430 aa25.6■■□□□ 1.69
SMARCD1-204ENST00000547637 PIDD1Q9HB75 910 aa25.6■■□□□ 1.69
SMARCD1-204ENST00000547637 RXFP1Q9HBX9 757 aa25.6■■□□□ 1.69
SMARCD1-204ENST00000547637 MARCH5Q9NX47 278 aa25.6■■□□□ 1.69
SMARCD1-204ENST00000547637 PARP2Q9UGN5 583 aa25.6■■□□□ 1.69
SMARCD1-204ENST00000547637 HES2Q9Y543 173 aa25.6■■□□□ 1.69
SMARCD1-204ENST00000547637 TDRD15B5MCY1 1934 aaKnown RBP25.59■■□□□ 1.69
SMARCD1-204ENST00000547637 DSG1Q02413 1049 aa25.59■■□□□ 1.69
SMARCD1-204ENST00000547637 GPR65Q8IYL9 337 aa25.59■■□□□ 1.69
SMARCD1-204ENST00000547637 TMEM105Q8N8V8 129 aa25.59■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms