RNA–Protein interactions for RNA: ENST00000547374.5

BRF1-210, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 5

Gene BRF1, Length 3,809 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-210ENST00000547374 KLHL29Q96CT2 875 aa13.94□□□□□ -0.18
BRF1-210ENST00000547374 PRMT6Q96LA8 375 aaPredicted RBP13.94□□□□□ -0.18
BRF1-210ENST00000547374 ZBTB12Q9Y330 459 aaPredicted RBP13.94□□□□□ -0.18
BRF1-210ENST00000547374 DOT1LQ8TEK3 1739 aa13.94□□□□□ -0.18
BRF1-210ENST00000547374 DOCK2Q92608 1830 aa13.94□□□□□ -0.18
BRF1-210ENST00000547374 FSBPO95073 299 aa13.94□□□□□ -0.18
BRF1-210ENST00000547374 MMP10P09238 476 aa13.94□□□□□ -0.18
BRF1-210ENST00000547374 TNNI1P19237 187 aa13.94□□□□□ -0.18
BRF1-210ENST00000547374 PTENP60484 403 aa13.94□□□□□ -0.18
BRF1-210ENST00000547374 CEP55Q53EZ4 464 aa13.94□□□□□ -0.18
BRF1-210ENST00000547374 OTOP1Q7RTM1 612 aa13.94□□□□□ -0.18
BRF1-210ENST00000547374 POMGNT1Q8WZA1 660 aa13.94□□□□□ -0.18
BRF1-210ENST00000547374 LENG9Q96B70 501 aa13.94□□□□□ -0.18
BRF1-210ENST00000547374 SLC24A3Q9HC58 644 aa13.94□□□□□ -0.18
BRF1-210ENST00000547374 CCPG1Q9ULG6 757 aa13.94□□□□□ -0.18
BRF1-210ENST00000547374 DDX60Q8IY21 1712 aaKnown RBP13.94□□□□□ -0.18
BRF1-210ENST00000547374 TMEM120BA0PK00 339 aa13.94□□□□□ -0.18
BRF1-210ENST00000547374 RARAP10276 462 aa13.94□□□□□ -0.18
BRF1-210ENST00000547374 SCP2P22307 547 aa13.94□□□□□ -0.18
BRF1-210ENST00000547374 PEX19P40855 299 aa13.94□□□□□ -0.18
BRF1-210ENST00000547374 ZNF449Q6P9G9 518 aa13.94□□□□□ -0.18
BRF1-210ENST00000547374 CDAN1Q8IWY9 1227 aa13.94□□□□□ -0.18
BRF1-210ENST00000547374 GLIS2Q9BZE0 524 aaPredicted RBP13.94□□□□□ -0.18
BRF1-210ENST00000547374 NSRP1Q9H0G5 558 aaKnown RBP13.94□□□□□ -0.18
BRF1-210ENST00000547374 TMEM59LQ9UK28 342 aa13.94□□□□□ -0.18
BRF1-210ENST00000547374 PASKQ96RG2 1323 aa13.93□□□□□ -0.18
BRF1-210ENST00000547374 CPP00450 1065 aa13.93□□□□□ -0.18
BRF1-210ENST00000547374 GH1P01241 217 aa13.93□□□□□ -0.18
BRF1-210ENST00000547374 CD302Q8IX05 232 aa13.93□□□□□ -0.18
BRF1-210ENST00000547374 DCAF4Q8WV16 495 aa13.93□□□□□ -0.18
BRF1-210ENST00000547374 FAM198AQ9UFP1 575 aa13.93□□□□□ -0.18
BRF1-210ENST00000547374 CCT8L1PA6NM43 557 aa13.93□□□□□ -0.18
BRF1-210ENST00000547374 H0Y3Z8 333 aa13.93□□□□□ -0.18
BRF1-210ENST00000547374 KIAA0391O15091 583 aaKnown RBP13.93□□□□□ -0.18
BRF1-210ENST00000547374 DDX3YO15523 660 aaKnown RBP13.93□□□□□ -0.18
BRF1-210ENST00000547374 UBOX5O94941 541 aa13.93□□□□□ -0.18
BRF1-210ENST00000547374 UPP2O95045 317 aa13.93□□□□□ -0.18
BRF1-210ENST00000547374 BRAFP15056 766 aa13.93□□□□□ -0.18
BRF1-210ENST00000547374 KRT15P19012 456 aa13.93□□□□□ -0.18
BRF1-210ENST00000547374 CD58P19256 250 aa13.93□□□□□ -0.18
BRF1-210ENST00000547374 SREBF1P36956 1147 aa13.93□□□□□ -0.18
BRF1-210ENST00000547374 SMTNP53814 917 aa13.93□□□□□ -0.18
BRF1-210ENST00000547374 BYSLQ13895 437 aaKnown RBP13.93□□□□□ -0.18
BRF1-210ENST00000547374 SEPT7Q16181 437 aaKnown RBP13.93□□□□□ -0.18
BRF1-210ENST00000547374 SH3BP5LQ7L8J4 393 aa13.93□□□□□ -0.18
BRF1-210ENST00000547374 FAM163AQ96GL9 167 aaPredicted RBP13.93□□□□□ -0.18
BRF1-210ENST00000547374 PCDHB18PQ96TA0 734 aa13.93□□□□□ -0.18
BRF1-210ENST00000547374 ALG13Q9NP73 1137 aaKnown RBP13.93□□□□□ -0.18
BRF1-210ENST00000547374 MYH1P12882 1939 aa13.93□□□□□ -0.18
BRF1-210ENST00000547374 MYH4Q9Y623 1939 aa13.93□□□□□ -0.18
BRF1-210ENST00000547374 PLCH1Q4KWH8 1693 aa13.93□□□□□ -0.18
BRF1-210ENST00000547374 PRKCIP41743 596 aa13.93□□□□□ -0.18
BRF1-210ENST00000547374 PDE6CP51160 858 aa13.93□□□□□ -0.18
BRF1-210ENST00000547374 DYNLT1P63172 113 aa13.93□□□□□ -0.18
BRF1-210ENST00000547374 C1orf186Q6ZWK4 172 aa13.93□□□□□ -0.18
BRF1-210ENST00000547374 HAUS6Q7Z4H7 955 aa13.93□□□□□ -0.18
BRF1-210ENST00000547374 NOP9Q86U38 636 aaKnown RBP13.93□□□□□ -0.18
BRF1-210ENST00000547374 VSIG1Q86XK7 387 aa13.93□□□□□ -0.18
BRF1-210ENST00000547374 SUGP1Q8IWZ8 645 aaKnown RBP13.93□□□□□ -0.18
BRF1-210ENST00000547374 TATDN2Q93075 761 aa13.93□□□□□ -0.18
BRF1-210ENST00000547374 ZNF668Q96K58 619 aaPredicted RBP13.93□□□□□ -0.18
BRF1-210ENST00000547374 FAM167BQ9BTA0 163 aa13.93□□□□□ -0.18
BRF1-210ENST00000547374 CARD9Q9H257 536 aa13.93□□□□□ -0.18
BRF1-210ENST00000547374 ARHGEF10LQ9HCE6 1279 aa13.93□□□□□ -0.18
BRF1-210ENST00000547374 CHST7Q9NS84 486 aa13.93□□□□□ -0.18
BRF1-210ENST00000547374 HSPBP1Q9NZL4 362 aa13.93□□□□□ -0.18
BRF1-210ENST00000547374 PPP1R1BQ9UD71 204 aaPredicted RBP13.93□□□□□ -0.18
BRF1-210ENST00000547374 DRD4P21917 467 aa13.92□□□□□ -0.18
BRF1-210ENST00000547374 SEZ6Q53EL9 994 aa13.92□□□□□ -0.18
BRF1-210ENST00000547374 TAOK1Q7L7X3 1001 aa13.92□□□□□ -0.18
BRF1-210ENST00000547374 SLC17A8Q8NDX2 589 aa13.92□□□□□ -0.18
BRF1-210ENST00000547374 ATP8B4Q8TF62 1192 aa13.92□□□□□ -0.18
BRF1-210ENST00000547374 SGSM3Q96HU1 749 aa13.92□□□□□ -0.18
BRF1-210ENST00000547374 C11orf70Q9BRQ4 267 aa13.92□□□□□ -0.18
BRF1-210ENST00000547374 VPS37BQ9H9H4 285 aa13.92□□□□□ -0.18
BRF1-210ENST00000547374 NKIRAS1Q9NYS0 192 aa13.92□□□□□ -0.18
BRF1-210ENST00000547374 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.92□□□□□ -0.18
BRF1-210ENST00000547374 PHF2O75151 1096 aa13.92□□□□□ -0.18
BRF1-210ENST00000547374 MYBL1P10243 752 aa13.92□□□□□ -0.18
BRF1-210ENST00000547374 KCNJ2P63252 427 aa13.92□□□□□ -0.18
BRF1-210ENST00000547374 ACCSLQ4AC99 568 aa13.92□□□□□ -0.18
BRF1-210ENST00000547374 AGBL2Q5U5Z8 902 aa13.92□□□□□ -0.18
BRF1-210ENST00000547374 CYFIP1Q7L576 1253 aa13.92□□□□□ -0.18
BRF1-210ENST00000547374 XXYLT1Q8NBI6 393 aa13.92□□□□□ -0.18
BRF1-210ENST00000547374 STAMBPL1Q96FJ0 436 aa13.92□□□□□ -0.18
BRF1-210ENST00000547374 VAV3Q9UKW4 847 aa13.92□□□□□ -0.18
BRF1-210ENST00000547374 ANKRD36CQ5JPF3 1778 aa13.92□□□□□ -0.18
BRF1-210ENST00000547374 A8MUI8 341 aa13.92□□□□□ -0.18
BRF1-210ENST00000547374 HNRNPDLO14979 420 aaKnown RBP13.92□□□□□ -0.18
BRF1-210ENST00000547374 ECE2O60344 883 aa13.92□□□□□ -0.18
BRF1-210ENST00000547374 CHKAP35790 457 aa13.92□□□□□ -0.18
BRF1-210ENST00000547374 EIF3BP55884 814 aaKnown RBP13.92□□□□□ -0.18
BRF1-210ENST00000547374 MARSP56192 900 aaKnown RBP13.92□□□□□ -0.18
BRF1-210ENST00000547374 RWDD2BP57060 319 aa13.92□□□□□ -0.18
BRF1-210ENST00000547374 SESN3P58005 492 aa13.92□□□□□ -0.18
BRF1-210ENST00000547374 NEDD9Q14511 834 aa13.92□□□□□ -0.18
BRF1-210ENST00000547374 C6orf118Q5T5N4 469 aa13.92□□□□□ -0.18
BRF1-210ENST00000547374 SIAH1Q8IUQ4 282 aa13.92□□□□□ -0.18
BRF1-210ENST00000547374 RHOT2Q8IXI1 618 aa13.92□□□□□ -0.18
BRF1-210ENST00000547374 SEPT12Q8IYM1 358 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms