RNA–Protein interactions for RNA: ENST00000547247.5

SMARCD1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 1 (best)

Gene SMARCD1, Length 1,584 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-203ENST00000547247 ACCSQ96QU6 501 aa25.43■■□□□ 1.66
SMARCD1-203ENST00000547247 TRAIPQ9BWF2 469 aa25.43■■□□□ 1.66
SMARCD1-203ENST00000547247 EXOC7Q9UPT5 735 aa25.43■■□□□ 1.66
SMARCD1-203ENST00000547247 SLC4A7Q9Y6M7 1214 aa25.43■■□□□ 1.66
SMARCD1-203ENST00000547247 C9IYK1 514 aa25.42■■□□□ 1.66
SMARCD1-203ENST00000547247 PRPF6O94906 941 aaKnown RBP25.42■■□□□ 1.66
SMARCD1-203ENST00000547247 AMHP03971 560 aa25.42■■□□□ 1.66
SMARCD1-203ENST00000547247 HABP4Q5JVS0 413 aaKnown RBP25.42■■□□□ 1.66
SMARCD1-203ENST00000547247 SLC27A1Q6PCB7 646 aa25.42■■□□□ 1.66
SMARCD1-203ENST00000547247 EPM2AIP1Q7L775 607 aaPredicted RBP25.42■■□□□ 1.66
SMARCD1-203ENST00000547247 CDR2LQ86X02 465 aaPredicted RBP25.42■■□□□ 1.66
SMARCD1-203ENST00000547247 ADPGKQ9BRR6 497 aa25.42■■□□□ 1.66
SMARCD1-203ENST00000547247 PDZD7Q9H5P4 517 aa25.42■■□□□ 1.66
SMARCD1-203ENST00000547247 TNFSF13BQ9Y275 285 aa25.42■■□□□ 1.66
SMARCD1-203ENST00000547247 A0A0U1RQF3 1178 aa25.41■■□□□ 1.66
SMARCD1-203ENST00000547247 HNRNPDLO14979 420 aaKnown RBP25.41■■□□□ 1.66
SMARCD1-203ENST00000547247 PIGRP01833 764 aa25.41■■□□□ 1.66
SMARCD1-203ENST00000547247 KCNA1Q09470 495 aa25.41■■□□□ 1.66
SMARCD1-203ENST00000547247 MYOCDQ8IZQ8 938 aa25.41■■□□□ 1.66
SMARCD1-203ENST00000547247 KIAA0895Q8NCT3 520 aa25.41■■□□□ 1.66
SMARCD1-203ENST00000547247 ZNF507Q8TCN5 953 aa25.41■■□□□ 1.66
SMARCD1-203ENST00000547247 TMEM206Q9H813 350 aa25.41■■□□□ 1.66
SMARCD1-203ENST00000547247 FAM105AQ9NUU6 356 aa25.41■■□□□ 1.66
SMARCD1-203ENST00000547247 KIAA1468Q9P260 1216 aa25.41■■□□□ 1.66
SMARCD1-203ENST00000547247 TRIOBPQ9H2D6 2365 aa25.41■■□□□ 1.66
SMARCD1-203ENST00000547247 LIG4P49917 911 aa25.4■■□□□ 1.66
SMARCD1-203ENST00000547247 RAB27AP51159 221 aa25.4■■□□□ 1.66
SMARCD1-203ENST00000547247 UBXN11Q5T124 520 aa25.4■■□□□ 1.66
SMARCD1-203ENST00000547247 SYCP3Q8IZU3 236 aa25.4■■□□□ 1.66
SMARCD1-203ENST00000547247 RNF216Q9NWF9 866 aaPredicted RBP25.4■■□□□ 1.66
SMARCD1-203ENST00000547247 UBE4BO95155 1302 aa25.4■■□□□ 1.66
SMARCD1-203ENST00000547247 TOM1L1O75674 476 aa25.39■■□□□ 1.66
SMARCD1-203ENST00000547247 SKIP12755 728 aa25.39■■□□□ 1.66
SMARCD1-203ENST00000547247 FAM189BP81408 668 aa25.39■■□□□ 1.66
SMARCD1-203ENST00000547247 DEFB103AP81534 67 aa25.39■■□□□ 1.66
SMARCD1-203ENST00000547247 EEF1DP3Q658K8 133 aa25.39■■□□□ 1.66
SMARCD1-203ENST00000547247 APBB1IPQ7Z5R6 666 aaPredicted RBP25.39■■□□□ 1.66
SMARCD1-203ENST00000547247 SCFD1Q8WVM8 642 aa25.39■■□□□ 1.66
SMARCD1-203ENST00000547247 TCHPQ9BT92 498 aa25.39■■□□□ 1.66
SMARCD1-203ENST00000547247 GTPBP4Q9BZE4 634 aaKnown RBP25.39■■□□□ 1.66
SMARCD1-203ENST00000547247 TRIM6Q9C030 488 aaPredicted RBP25.39■■□□□ 1.66
SMARCD1-203ENST00000547247 PTPRHQ9HD43 1115 aa25.39■■□□□ 1.66
SMARCD1-203ENST00000547247 ECHDC2Q86YB7 292 aa25.39■■□□□ 1.65
SMARCD1-203ENST00000547247 PHOSPHO2Q8TCD6 241 aa25.39■■□□□ 1.65
SMARCD1-203ENST00000547247 SLC9A7Q96T83 725 aa25.39■■□□□ 1.65
SMARCD1-203ENST00000547247 EIF2AQ9BY44 585 aaKnown RBP25.39■■□□□ 1.65
SMARCD1-203ENST00000547247 MAN1B1Q9UKM7 699 aa25.39■■□□□ 1.65
SMARCD1-203ENST00000547247 PCDHB2Q9Y5E7 798 aa25.39■■□□□ 1.65
SMARCD1-203ENST00000547247 LAMA2P24043 3122 aaKnown RBP25.38■■□□□ 1.65
SMARCD1-203ENST00000547247 ZNF623O75123 536 aa25.38■■□□□ 1.65
SMARCD1-203ENST00000547247 NPTXRO95502 500 aa25.38■■□□□ 1.65
SMARCD1-203ENST00000547247 IBSPP21815 317 aaPredicted RBP25.38■■□□□ 1.65
SMARCD1-203ENST00000547247 PROZP22891 400 aa25.38■■□□□ 1.65
SMARCD1-203ENST00000547247 BMT2Q1RMZ1 405 aa25.38■■□□□ 1.65
SMARCD1-203ENST00000547247 DCAF4L1Q3SXM0 396 aa25.38■■□□□ 1.65
SMARCD1-203ENST00000547247 ZNF568Q3ZCX4 644 aa25.38■■□□□ 1.65
SMARCD1-203ENST00000547247 ZNF658Q5TYW1 1059 aaPredicted RBP25.38■■□□□ 1.65
SMARCD1-203ENST00000547247 MPZL3Q6UWV2 235 aa25.38■■□□□ 1.65
SMARCD1-203ENST00000547247 TOP1MTQ969P6 601 aa25.38■■□□□ 1.65
SMARCD1-203ENST00000547247 ZBTB45Q96K62 511 aaPredicted RBP25.38■■□□□ 1.65
SMARCD1-203ENST00000547247 ELAC1Q9H777 363 aaKnown RBP25.38■■□□□ 1.65
SMARCD1-203ENST00000547247 GDAQ9Y2T3 454 aa25.38■■□□□ 1.65
SMARCD1-203ENST00000547247 PCDHB7Q9Y5E2 793 aa25.38■■□□□ 1.65
SMARCD1-203ENST00000547247 TTC3P53804 2025 aa25.38■■□□□ 1.65
SMARCD1-203ENST00000547247 CLDN3O15551 220 aa25.37■■□□□ 1.65
SMARCD1-203ENST00000547247 KIF20AO95235 890 aa25.37■■□□□ 1.65
SMARCD1-203ENST00000547247 STAG3L1P0CL83 205 aa25.37■■□□□ 1.65
SMARCD1-203ENST00000547247 ATP2A2P16615 1042 aaKnown RBP25.37■■□□□ 1.65
SMARCD1-203ENST00000547247 NPAS4Q8IUM7 802 aa25.37■■□□□ 1.65
SMARCD1-203ENST00000547247 NELFCDQ8IXH7 590 aa25.37■■□□□ 1.65
SMARCD1-203ENST00000547247 TMEM161AQ9NX61 479 aa25.37■■□□□ 1.65
SMARCD1-203ENST00000547247 ANKFY1Q9P2R3 1169 aa25.37■■□□□ 1.65
SMARCD1-203ENST00000547247 LRFN2Q9ULH4 789 aa25.37■■□□□ 1.65
SMARCD1-203ENST00000547247 LAMA3Q16787 3333 aa25.36■■□□□ 1.65
SMARCD1-203ENST00000547247 ANKRD63C9JTQ0 380 aa25.36■■□□□ 1.65
SMARCD1-203ENST00000547247 UPP2O95045 317 aa25.36■■□□□ 1.65
SMARCD1-203ENST00000547247 EOMESO95936 686 aa25.36■■□□□ 1.65
SMARCD1-203ENST00000547247 HOXD13P35453 343 aa25.36■■□□□ 1.65
SMARCD1-203ENST00000547247 MATR3P43243 847 aaKnown RBP eCLIP25.36■■□□□ 1.65
SMARCD1-203ENST00000547247 ISM2Q6H9L7 571 aa25.36■■□□□ 1.65
SMARCD1-203ENST00000547247 SLC39A4Q6P5W5 647 aa25.36■■□□□ 1.65
SMARCD1-203ENST00000547247 CDT1Q9H211 546 aa25.36■■□□□ 1.65
SMARCD1-203ENST00000547247 IPPQ9Y573 584 aa25.36■■□□□ 1.65
SMARCD1-203ENST00000547247 BIN1O00499 593 aa25.35■■□□□ 1.65
SMARCD1-203ENST00000547247 ABLIM1O14639 778 aa25.35■■□□□ 1.65
SMARCD1-203ENST00000547247 KNOP1Q1ED39 458 aaKnown RBP25.35■■□□□ 1.65
SMARCD1-203ENST00000547247 KLHL40Q2TBA0 621 aa25.35■■□□□ 1.65
SMARCD1-203ENST00000547247 SLFN12LQ6IEE8 588 aa25.35■■□□□ 1.65
SMARCD1-203ENST00000547247 MRPL10Q7Z7H8 261 aaKnown RBP25.35■■□□□ 1.65
SMARCD1-203ENST00000547247 ZBTB33Q86T24 672 aa25.35■■□□□ 1.65
SMARCD1-203ENST00000547247 CRIPAKQ8N1N5 446 aa25.35■■□□□ 1.65
SMARCD1-203ENST00000547247 TRIML1Q8N9V2 468 aa25.35■■□□□ 1.65
SMARCD1-203ENST00000547247 PGBD4Q96DM1 585 aa25.35■■□□□ 1.65
SMARCD1-203ENST00000547247 GBP3Q9H0R5 595 aa25.35■■□□□ 1.65
SMARCD1-203ENST00000547247 IKZF4Q9H2S9 585 aa25.35■■□□□ 1.65
SMARCD1-203ENST00000547247 MCF2P10911 925 aa25.35■■□□□ 1.65
SMARCD1-203ENST00000547247 ATF7P17544 494 aaPredicted RBP25.35■■□□□ 1.65
SMARCD1-203ENST00000547247 MCL1Q07820 350 aa25.35■■□□□ 1.65
SMARCD1-203ENST00000547247 MORC3Q14149 939 aa25.35■■□□□ 1.65
SMARCD1-203ENST00000547247 NOLC1Q14978 699 aaKnown RBP eCLIP25.35■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms