RNA–Protein interactions for RNA: ENST00000546537.6

TMEM116-203, Transcript of transmembrane protein 116, humanhuman

TSL 5

Gene TMEM116, Length 599 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-203ENST00000546537 RSAD1Q9HA92 442 aa12.18□□□□□ -0.46
TMEM116-203ENST00000546537 NRBP2Q9NSY0 501 aa12.18□□□□□ -0.46
TMEM116-203ENST00000546537 MRPS17Q9Y2R5 130 aaKnown RBP12.18□□□□□ -0.46
TMEM116-203ENST00000546537 PCDHB2Q9Y5E7 798 aa12.18□□□□□ -0.46
TMEM116-203ENST00000546537 NOTCH4Q99466 2003 aa12.18□□□□□ -0.46
TMEM116-203ENST00000546537 CNTNAP2Q9UHC6 1331 aa12.17□□□□□ -0.46
TMEM116-203ENST00000546537 CEP295Q9C0D2 2601 aa12.17□□□□□ -0.46
TMEM116-203ENST00000546537 A0A087WZ62 844 aa12.17□□□□□ -0.46
TMEM116-203ENST00000546537 ZNF862O60290 1169 aa12.17□□□□□ -0.46
TMEM116-203ENST00000546537 POMCP01189 267 aa12.17□□□□□ -0.46
TMEM116-203ENST00000546537 OATP04181 439 aa12.17□□□□□ -0.46
TMEM116-203ENST00000546537 NTHL1P78549 312 aa12.17□□□□□ -0.46
TMEM116-203ENST00000546537 TYW1BQ6NUM6 668 aa12.17□□□□□ -0.46
TMEM116-203ENST00000546537 COLGALT2Q8IYK4 626 aa12.17□□□□□ -0.46
TMEM116-203ENST00000546537 ZNF687Q8N1G0 1237 aa12.17□□□□□ -0.46
TMEM116-203ENST00000546537 MBOAT7Q96N66 472 aa12.17□□□□□ -0.46
TMEM116-203ENST00000546537 KXD1Q9BQD3 176 aa12.17□□□□□ -0.46
TMEM116-203ENST00000546537 FDXACB1Q9BRP7 624 aaPredicted RBP12.17□□□□□ -0.46
TMEM116-203ENST00000546537 ZNF577Q9BSK1 485 aa12.17□□□□□ -0.46
TMEM116-203ENST00000546537 PHF20Q9BVI0 1012 aa12.17□□□□□ -0.46
TMEM116-203ENST00000546537 INO80BQ9C086 356 aaPredicted RBP12.17□□□□□ -0.46
TMEM116-203ENST00000546537 CHRDQ9H2X0 955 aa12.17□□□□□ -0.46
TMEM116-203ENST00000546537 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP12.17□□□□□ -0.46
TMEM116-203ENST00000546537 FNIP2Q9P278 1114 aa12.17□□□□□ -0.46
TMEM116-203ENST00000546537 PRG3Q9Y2Y8 225 aaPredicted RBP12.17□□□□□ -0.46
TMEM116-203ENST00000546537 TAF6LQ9Y6J9 622 aa12.17□□□□□ -0.46
TMEM116-203ENST00000546537 ZFYVE26Q68DK2 2539 aa12.16□□□□□ -0.46
TMEM116-203ENST00000546537 SOBPA7XYQ1 873 aa12.16□□□□□ -0.46
TMEM116-203ENST00000546537 C1QTNF9BB2RNN3 333 aa12.16□□□□□ -0.46
TMEM116-203ENST00000546537 C1QTNF9P0C862 333 aa12.16□□□□□ -0.46
TMEM116-203ENST00000546537 RXRAP19793 462 aa12.16□□□□□ -0.46
TMEM116-203ENST00000546537 OR1G1P47890 313 aa12.16□□□□□ -0.46
TMEM116-203ENST00000546537 CLK2P49760 499 aaKnown RBP12.16□□□□□ -0.46
TMEM116-203ENST00000546537 PRKCEQ02156 737 aa12.16□□□□□ -0.46
TMEM116-203ENST00000546537 AP3B2Q13367 1082 aa12.16□□□□□ -0.46
TMEM116-203ENST00000546537 SIM2Q14190 667 aaPredicted RBP12.16□□□□□ -0.46
TMEM116-203ENST00000546537 WWC2Q6AWC2 1192 aa12.16□□□□□ -0.46
TMEM116-203ENST00000546537 UNQ6494/PRO21346Q6UXR6 183 aa12.16□□□□□ -0.46
TMEM116-203ENST00000546537 ZNF410Q86VK4 478 aa12.16□□□□□ -0.46
TMEM116-203ENST00000546537 GLYCTKQ8IVS8 523 aa12.16□□□□□ -0.46
TMEM116-203ENST00000546537 PLEKHM2Q8IWE5 1019 aa12.16□□□□□ -0.46
TMEM116-203ENST00000546537 MB21D2Q8IYB1 491 aaPredicted RBP12.16□□□□□ -0.46
TMEM116-203ENST00000546537 GPR65Q8IYL9 337 aa12.16□□□□□ -0.46
TMEM116-203ENST00000546537 CCDC82Q8N4S0 544 aa12.16□□□□□ -0.46
TMEM116-203ENST00000546537 KDF1Q8NAX2 398 aaPredicted RBP12.16□□□□□ -0.46
TMEM116-203ENST00000546537 CRYGNQ8WXF5 182 aa12.16□□□□□ -0.46
TMEM116-203ENST00000546537 MAP4K1Q92918 833 aa12.16□□□□□ -0.46
TMEM116-203ENST00000546537 IER2Q9BTL4 223 aa12.16□□□□□ -0.46
TMEM116-203ENST00000546537 HEBP1Q9NRV9 189 aa12.16□□□□□ -0.46
TMEM116-203ENST00000546537 WDFY3Q8IZQ1 3526 aa12.16□□□□□ -0.46
TMEM116-203ENST00000546537 COL4A2P08572 1712 aa12.15□□□□□ -0.46
TMEM116-203ENST00000546537 CYP3A4P08684 503 aa12.15□□□□□ -0.46
TMEM116-203ENST00000546537 HNRNPA1P09651 372 aaKnown RBP eCLIP12.15□□□□□ -0.46
TMEM116-203ENST00000546537 CALM1P0DP23 149 aa12.15□□□□□ -0.46
TMEM116-203ENST00000546537 CALM2P0DP24 149 aa12.15□□□□□ -0.46
TMEM116-203ENST00000546537 CALM3P0DP25 149 aa12.15□□□□□ -0.46
TMEM116-203ENST00000546537 CCR3P51677 355 aa12.15□□□□□ -0.46
TMEM116-203ENST00000546537 NAPAP54920 295 aa12.15□□□□□ -0.46
TMEM116-203ENST00000546537 DSC1Q08554 894 aa12.15□□□□□ -0.46
TMEM116-203ENST00000546537 TARBP2Q15633 366 aaKnown RBP12.15□□□□□ -0.46
TMEM116-203ENST00000546537 PPP1R18Q6NYC8 613 aa12.15□□□□□ -0.46
TMEM116-203ENST00000546537 CATSPER4Q7RTX7 472 aa12.15□□□□□ -0.46
TMEM116-203ENST00000546537 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.15□□□□□ -0.46
TMEM116-203ENST00000546537 ITFG1Q8TB96 612 aa12.15□□□□□ -0.46
TMEM116-203ENST00000546537 B3GALT6Q96L58 329 aa12.15□□□□□ -0.46
TMEM116-203ENST00000546537 MTA3Q9BTC8 594 aa12.15□□□□□ -0.46
TMEM116-203ENST00000546537 AGPAT5Q9NUQ2 364 aa12.15□□□□□ -0.46
TMEM116-203ENST00000546537 TCEAL9Q9UHQ7 104 aa12.15□□□□□ -0.46
TMEM116-203ENST00000546537 SAMM50Q9Y512 469 aa12.15□□□□□ -0.46
TMEM116-203ENST00000546537 IGKV6-21A0A0C4DH24 114 aa12.14□□□□□ -0.47
TMEM116-203ENST00000546537 WDR64B1ANS9 1081 aa12.14□□□□□ -0.47
TMEM116-203ENST00000546537 F8W810 466 aa12.14□□□□□ -0.47
TMEM116-203ENST00000546537 HRO43593 1189 aa12.14□□□□□ -0.47
TMEM116-203ENST00000546537 ECI2O75521 394 aa12.14□□□□□ -0.47
TMEM116-203ENST00000546537 RPL17P18621 184 aaKnown RBP12.14□□□□□ -0.47
TMEM116-203ENST00000546537 HOXA9P31269 272 aa12.14□□□□□ -0.47
TMEM116-203ENST00000546537 CNR2P34972 360 aa12.14□□□□□ -0.47
TMEM116-203ENST00000546537 ADCY7P51828 1080 aa12.14□□□□□ -0.47
TMEM116-203ENST00000546537 SETQ01105 290 aaPredicted RBP12.14□□□□□ -0.47
TMEM116-203ENST00000546537 CREMQ03060 361 aa12.14□□□□□ -0.47
TMEM116-203ENST00000546537 HDAC1Q13547 482 aaPredicted RBP12.14□□□□□ -0.47
TMEM116-203ENST00000546537 USP41Q3LFD5 358 aa12.14□□□□□ -0.47
TMEM116-203ENST00000546537 PPP4R3CPQ6ZMV5 832 aa12.14□□□□□ -0.47
TMEM116-203ENST00000546537 TMTC3Q6ZXV5 915 aa12.14□□□□□ -0.47
TMEM116-203ENST00000546537 TMTC2Q8N394 836 aa12.14□□□□□ -0.47
TMEM116-203ENST00000546537 CEP89Q96ST8 783 aa12.14□□□□□ -0.47
TMEM116-203ENST00000546537 GPR62Q9BZJ7 368 aa12.14□□□□□ -0.47
TMEM116-203ENST00000546537 FBXW11Q9UKB1 542 aa12.14□□□□□ -0.47
TMEM116-203ENST00000546537 SMCO2A6NFE2 343 aa12.13□□□□□ -0.47
TMEM116-203ENST00000546537 CCDC69A6NI79 296 aa12.13□□□□□ -0.47
TMEM116-203ENST00000546537 MAN2B1O00754 1011 aa12.13□□□□□ -0.47
TMEM116-203ENST00000546537 NCLP19338 710 aaKnown RBP12.13□□□□□ -0.47
TMEM116-203ENST00000546537 DNM2P50570 870 aa12.13□□□□□ -0.47
TMEM116-203ENST00000546537 PTH1RQ03431 593 aa12.13□□□□□ -0.47
TMEM116-203ENST00000546537 UGCGQ16739 394 aa12.13□□□□□ -0.47
TMEM116-203ENST00000546537 AASDHQ4L235 1098 aaPredicted RBP12.13□□□□□ -0.47
TMEM116-203ENST00000546537 PPM1LQ5SGD2 360 aa12.13□□□□□ -0.47
TMEM116-203ENST00000546537 UBXN11Q5T124 520 aa12.13□□□□□ -0.47
TMEM116-203ENST00000546537 LRSAM1Q6UWE0 723 aa12.13□□□□□ -0.47
TMEM116-203ENST00000546537 NFXL1Q6ZNB6 911 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms