RNA–Protein interactions for RNA: ENST00000546276.5

NPC1L1-204, Transcript of NPC1 like intracellular cholesterol transporter 1, humanhuman

TSL 1 (best) BASIC

Gene NPC1L1, Length 4,826 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1-204ENST00000546276 TTI2Q6NXR4 508 aa13.01□□□□□ -0.33
NPC1L1-204ENST00000546276 AGGF1Q8N302 714 aaeCLIP13.01□□□□□ -0.33
NPC1L1-204ENST00000546276 FLAD1Q8NFF5 587 aa13.01□□□□□ -0.33
NPC1L1-204ENST00000546276 LXNQ9BS40 222 aa13.01□□□□□ -0.33
NPC1L1-204ENST00000546276 SMG5Q9UPR3 1016 aaKnown RBP13.01□□□□□ -0.33
NPC1L1-204ENST00000546276 ABCB11O95342 1321 aa13.01□□□□□ -0.33
NPC1L1-204ENST00000546276 FXR2P51116 673 aaKnown RBP eCLIP13.01□□□□□ -0.33
NPC1L1-204ENST00000546276 MTMR1Q13613 665 aa13.01□□□□□ -0.33
NPC1L1-204ENST00000546276 PDXDC2PQ6P474 469 aa13.01□□□□□ -0.33
NPC1L1-204ENST00000546276 BRINP3Q76B58 766 aa13.01□□□□□ -0.33
NPC1L1-204ENST00000546276 ZNF34Q8IZ26 560 aa13.01□□□□□ -0.33
NPC1L1-204ENST00000546276 REEP2Q9BRK0 252 aa13.01□□□□□ -0.33
NPC1L1-204ENST00000546276 FAM213AQ9BRX8 229 aa13.01□□□□□ -0.33
NPC1L1-204ENST00000546276 ROPN1BQ9BZX4 212 aaPredicted RBP13.01□□□□□ -0.33
NPC1L1-204ENST00000546276 ROPN1Q9HAT0 212 aaPredicted RBP13.01□□□□□ -0.33
NPC1L1-204ENST00000546276 NDE1Q9NXR1 346 aa13.01□□□□□ -0.33
NPC1L1-204ENST00000546276 UVRAGQ9P2Y5 699 aa13.01□□□□□ -0.33
NPC1L1-204ENST00000546276 DMGDHQ9UI17 866 aaKnown RBP13.01□□□□□ -0.33
NPC1L1-204ENST00000546276 TNS3Q68CZ2 1445 aa13.01□□□□□ -0.33
NPC1L1-204ENST00000546276 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.01□□□□□ -0.33
NPC1L1-204ENST00000546276 DENND3A2RUS2 1198 aa13.01□□□□□ -0.33
NPC1L1-204ENST00000546276 WDR64B1ANS9 1081 aa13.01□□□□□ -0.33
NPC1L1-204ENST00000546276 SLC1A1P43005 524 aa13.01□□□□□ -0.33
NPC1L1-204ENST00000546276 KPNA2P52292 529 aaKnown RBP13.01□□□□□ -0.33
NPC1L1-204ENST00000546276 TRIM72Q6ZMU5 477 aa13.01□□□□□ -0.33
NPC1L1-204ENST00000546276 HACE1Q8IYU2 909 aa13.01□□□□□ -0.33
NPC1L1-204ENST00000546276 TBC1D22BQ9NU19 505 aa13.01□□□□□ -0.33
NPC1L1-204ENST00000546276 SEC23IPQ9Y6Y8 1000 aaKnown RBP13.01□□□□□ -0.33
NPC1L1-204ENST00000546276 NEURL4Q96JN8 1562 aa13□□□□□ -0.33
NPC1L1-204ENST00000546276 CYP26A1O43174 497 aa13□□□□□ -0.33
NPC1L1-204ENST00000546276 HSPA4LO95757 839 aa13□□□□□ -0.33
NPC1L1-204ENST00000546276 IGBP1P78318 339 aa13□□□□□ -0.33
NPC1L1-204ENST00000546276 DEUP1Q05D60 604 aa13□□□□□ -0.33
NPC1L1-204ENST00000546276 NT5DC1Q5TFE4 455 aa13□□□□□ -0.33
NPC1L1-204ENST00000546276 EXOC8Q8IYI6 725 aa13□□□□□ -0.33
NPC1L1-204ENST00000546276 TUFT1Q9NNX1 390 aa13□□□□□ -0.33
NPC1L1-204ENST00000546276 STRIP2Q9ULQ0 834 aa13□□□□□ -0.33
NPC1L1-204ENST00000546276 ZNF335Q9H4Z2 1342 aaPredicted RBP13□□□□□ -0.33
NPC1L1-204ENST00000546276 QARSP47897 775 aaKnown RBP13□□□□□ -0.33
NPC1L1-204ENST00000546276 SARSP49591 514 aaKnown RBP13□□□□□ -0.33
NPC1L1-204ENST00000546276 CACNB3P54284 484 aa13□□□□□ -0.33
NPC1L1-204ENST00000546276 DYNC1I2Q13409 638 aaKnown RBP13□□□□□ -0.33
NPC1L1-204ENST00000546276 ZNF394Q53GI3 561 aa13□□□□□ -0.33
NPC1L1-204ENST00000546276 KLHDC7AQ5VTJ3 777 aa13□□□□□ -0.33
NPC1L1-204ENST00000546276 SPOPLQ6IQ16 392 aa13□□□□□ -0.33
NPC1L1-204ENST00000546276 CYB5D1Q6P9G0 228 aa13□□□□□ -0.33
NPC1L1-204ENST00000546276 FBXL13Q8NEE6 735 aa13□□□□□ -0.33
NPC1L1-204ENST00000546276 SUDS3Q9H7L9 328 aaPredicted RBP13□□□□□ -0.33
NPC1L1-204ENST00000546276 PPM1NQ8N819 430 aa13□□□□□ -0.33
NPC1L1-204ENST00000546276 DAGLBQ8NCG7 672 aa13□□□□□ -0.33
NPC1L1-204ENST00000546276 ABTB1Q969K4 478 aaPredicted RBP13□□□□□ -0.33
NPC1L1-204ENST00000546276 HEXIM2Q96MH2 286 aaKnown RBP13□□□□□ -0.33
NPC1L1-204ENST00000546276 GOLPH3Q9H4A6 298 aa13□□□□□ -0.33
NPC1L1-204ENST00000546276 SMYD3Q9H7B4 428 aa13□□□□□ -0.33
NPC1L1-204ENST00000546276 IPO11Q9UI26 975 aaKnown RBP13□□□□□ -0.33
NPC1L1-204ENST00000546276 SALL1Q9NSC2 1324 aa13□□□□□ -0.33
NPC1L1-204ENST00000546276 F5H6K3 240 aa13□□□□□ -0.33
NPC1L1-204ENST00000546276 TBXAS1P24557 533 aaPredicted RBP13□□□□□ -0.33
NPC1L1-204ENST00000546276 GNA15P30679 374 aa13□□□□□ -0.33
NPC1L1-204ENST00000546276 CRKP46108 304 aa13□□□□□ -0.33
NPC1L1-204ENST00000546276 KLRC3Q07444 240 aa13□□□□□ -0.33
NPC1L1-204ENST00000546276 ITKQ08881 620 aa13□□□□□ -0.33
NPC1L1-204ENST00000546276 FSCBQ5H9T9 825 aa13□□□□□ -0.33
NPC1L1-204ENST00000546276 NCAPG2Q86XI2 1143 aa13□□□□□ -0.33
NPC1L1-204ENST00000546276 ATP6V0A4Q9HBG4 840 aa13□□□□□ -0.33
NPC1L1-204ENST00000546276 MTMR4Q9NYA4 1195 aa13□□□□□ -0.33
NPC1L1-204ENST00000546276 TMEM120BA0PK00 339 aa12.99□□□□□ -0.33
NPC1L1-204ENST00000546276 CLDN3O15551 220 aa12.99□□□□□ -0.33
NPC1L1-204ENST00000546276 SCP2P22307 547 aa12.99□□□□□ -0.33
NPC1L1-204ENST00000546276 OSTNP61366 133 aa12.99□□□□□ -0.33
NPC1L1-204ENST00000546276 ZNF543Q08ER8 600 aa12.99□□□□□ -0.33
NPC1L1-204ENST00000546276 SESTD1Q86VW0 696 aa12.99□□□□□ -0.33
NPC1L1-204ENST00000546276 CCDC68Q9H2F9 335 aa12.99□□□□□ -0.33
NPC1L1-204ENST00000546276 NGRNQ9NPE2 291 aaKnown RBP12.99□□□□□ -0.33
NPC1L1-204ENST00000546276 RGL1Q9NZL6 768 aa12.99□□□□□ -0.33
NPC1L1-204ENST00000546276 ARSEP51690 589 aa12.99□□□□□ -0.33
NPC1L1-204ENST00000546276 EPHA7Q15375 998 aa12.99□□□□□ -0.33
NPC1L1-204ENST00000546276 EZH2Q15910 746 aaKnown RBP12.99□□□□□ -0.33
NPC1L1-204ENST00000546276 CDO1Q16878 200 aa12.99□□□□□ -0.33
NPC1L1-204ENST00000546276 ARHGAP18Q8N392 663 aa12.99□□□□□ -0.33
NPC1L1-204ENST00000546276 TRIML2Q8N7C3 387 aa12.99□□□□□ -0.33
NPC1L1-204ENST00000546276 CAVIN3Q969G5 261 aa12.99□□□□□ -0.33
NPC1L1-204ENST00000546276 TTC1Q99614 292 aa12.99□□□□□ -0.33
NPC1L1-204ENST00000546276 CD248Q9HCU0 757 aa12.99□□□□□ -0.33
NPC1L1-204ENST00000546276 DDX56Q9NY93 547 aaKnown RBP12.99□□□□□ -0.33
NPC1L1-204ENST00000546276 CD163L1Q9NR16 1453 aa12.99□□□□□ -0.33
NPC1L1-204ENST00000546276 A0A087X0T9 212 aa12.99□□□□□ -0.33
NPC1L1-204ENST00000546276 FAM196BA6NMK8 535 aa12.99□□□□□ -0.33
NPC1L1-204ENST00000546276 CREB3O43889 395 aa12.99□□□□□ -0.33
NPC1L1-204ENST00000546276 KRT7P08729 469 aa12.99□□□□□ -0.33
NPC1L1-204ENST00000546276 FAM228BP0C875 321 aa12.99□□□□□ -0.33
NPC1L1-204ENST00000546276 KITP10721 976 aa12.99□□□□□ -0.33
NPC1L1-204ENST00000546276 MX2P20592 715 aa12.99□□□□□ -0.33
NPC1L1-204ENST00000546276 TPCN2Q8NHX9 752 aa12.99□□□□□ -0.33
NPC1L1-204ENST00000546276 TRIM56Q9BRZ2 755 aaKnown RBP12.99□□□□□ -0.33
NPC1L1-204ENST00000546276 TMBIM4Q9HC24 238 aa12.99□□□□□ -0.33
NPC1L1-204ENST00000546276 KBTBD4Q9NVX7 518 aa12.99□□□□□ -0.33
NPC1L1-204ENST00000546276 CLEC11AQ9Y240 323 aa12.99□□□□□ -0.33
NPC1L1-204ENST00000546276 FAM47DPA6NHR8 397 aa12.99□□□□□ -0.33
NPC1L1-204ENST00000546276 MYBP10242 640 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms