RNA–Protein interactions for RNA: ENST00000545432.5

RTN3-214, Transcript of reticulon 3, humanhuman

TSL 4

Gene RTN3, Length 545 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-214ENST00000545432 SPTLC1O15269 473 aa16.52■□□□□ 0.24
RTN3-214ENST00000545432 KRT37O76014 449 aa16.52■□□□□ 0.24
RTN3-214ENST00000545432 GLUD2P49448 558 aa16.52■□□□□ 0.24
RTN3-214ENST00000545432 RSPO4Q2I0M5 234 aaPredicted RBP16.52■□□□□ 0.24
RTN3-214ENST00000545432 LRCH2Q5VUJ6 765 aa16.52■□□□□ 0.24
RTN3-214ENST00000545432 ZBTB44Q8NCP5 570 aa16.52■□□□□ 0.24
RTN3-214ENST00000545432 SMG8Q8ND04 991 aaKnown RBP16.52■□□□□ 0.24
RTN3-214ENST00000545432 BICD2Q8TD16 824 aa16.52■□□□□ 0.24
RTN3-214ENST00000545432 SHDQ96IW2 340 aa16.52■□□□□ 0.24
RTN3-214ENST00000545432 TCEANC2Q96MN5 208 aa16.52■□□□□ 0.24
RTN3-214ENST00000545432 TGM5O43548 720 aa16.51■□□□□ 0.23
RTN3-214ENST00000545432 GAS2O43903 313 aaKnown RBP16.51■□□□□ 0.23
RTN3-214ENST00000545432 KINO60870 393 aaKnown RBP16.51■□□□□ 0.23
RTN3-214ENST00000545432 LILRB5O75023 590 aa16.51■□□□□ 0.23
RTN3-214ENST00000545432 TGM1P22735 817 aa16.51■□□□□ 0.23
RTN3-214ENST00000545432 NTRK3Q16288 839 aa16.51■□□□□ 0.23
RTN3-214ENST00000545432 ADCK5Q3MIX3 580 aa16.51■□□□□ 0.23
RTN3-214ENST00000545432 SPECC1Q5M775 1068 aa16.51■□□□□ 0.23
RTN3-214ENST00000545432 VARS2Q5ST30 1063 aaKnown RBP16.51■□□□□ 0.23
RTN3-214ENST00000545432 RSPO2Q6UXX9 243 aaPredicted RBP16.51■□□□□ 0.23
RTN3-214ENST00000545432 MIER3Q7Z3K6 550 aa16.51■□□□□ 0.23
RTN3-214ENST00000545432 FBXL16Q8N461 479 aa16.51■□□□□ 0.23
RTN3-214ENST00000545432 FAM193BQ96PV7 902 aaPredicted RBP16.51■□□□□ 0.23
RTN3-214ENST00000545432 SH2D3AQ9BRG2 576 aa16.51■□□□□ 0.23
RTN3-214ENST00000545432 RPP25Q9BUL9 199 aaKnown RBP16.51■□□□□ 0.23
RTN3-214ENST00000545432 MINDY3Q9H8M7 445 aa16.51■□□□□ 0.23
RTN3-214ENST00000545432 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP16.51■□□□□ 0.23
RTN3-214ENST00000545432 MIOSQ9NXC5 875 aa16.51■□□□□ 0.23
RTN3-214ENST00000545432 SEPT9Q9UHD8 586 aaPredicted RBP16.51■□□□□ 0.23
RTN3-214ENST00000545432 PPME1Q9Y570 386 aa16.51■□□□□ 0.23
RTN3-214ENST00000545432 PCDHGA2Q9Y5H1 932 aa16.51■□□□□ 0.23
RTN3-214ENST00000545432 NUMBLQ9Y6R0 609 aa16.51■□□□□ 0.23
RTN3-214ENST00000545432 KANSL1LA0AUZ9 987 aa16.5■□□□□ 0.23
RTN3-214ENST00000545432 C2CD2LO14523 706 aa16.5■□□□□ 0.23
RTN3-214ENST00000545432 CHMP2AO43633 222 aa16.5■□□□□ 0.23
RTN3-214ENST00000545432 LRRN2O75325 713 aa16.5■□□□□ 0.23
RTN3-214ENST00000545432 ZMYND10O75800 440 aa16.5■□□□□ 0.23
RTN3-214ENST00000545432 POMCP01189 267 aa16.5■□□□□ 0.23
RTN3-214ENST00000545432 MAGEA9P43362 315 aa16.5■□□□□ 0.23
RTN3-214ENST00000545432 ATXN1P54253 815 aaKnown RBP16.5■□□□□ 0.23
RTN3-214ENST00000545432 GPC5P78333 572 aa16.5■□□□□ 0.23
RTN3-214ENST00000545432 PRKCQQ04759 706 aa16.5■□□□□ 0.23
RTN3-214ENST00000545432 PCBP1Q15365 356 aaKnown RBP eCLIP16.5■□□□□ 0.231e-11■■■□□ 14.6
RTN3-214ENST00000545432 RNF20Q5VTR2 975 aa16.5■□□□□ 0.23
RTN3-214ENST00000545432 RASEFQ8IZ41 740 aa16.5■□□□□ 0.23
RTN3-214ENST00000545432 GJA10Q969M2 543 aa16.5■□□□□ 0.23
RTN3-214ENST00000545432 NLRP4Q96MN2 994 aa16.5■□□□□ 0.23
RTN3-214ENST00000545432 FOXQ1Q9C009 403 aa16.5■□□□□ 0.23
RTN3-214ENST00000545432 DHX33Q9H6R0 707 aaKnown RBP16.5■□□□□ 0.23
RTN3-214ENST00000545432 COL4A3BPQ9Y5P4 624 aa16.5■□□□□ 0.23
RTN3-214ENST00000545432 DDX11L8A8MPP1 907 aa16.49■□□□□ 0.23
RTN3-214ENST00000545432 RFX1P22670 979 aa16.49■□□□□ 0.23
RTN3-214ENST00000545432 PSMC5P62195 406 aa16.49■□□□□ 0.23
RTN3-214ENST00000545432 MOXD1Q6UVY6 613 aa16.49■□□□□ 0.23
RTN3-214ENST00000545432 EXOC8Q8IYI6 725 aa16.49■□□□□ 0.23
RTN3-214ENST00000545432 GSTCDQ8NEC7 633 aa16.49■□□□□ 0.23
RTN3-214ENST00000545432 ETNPPLQ8TBG4 499 aa16.49■□□□□ 0.23
RTN3-214ENST00000545432 PRPF31Q8WWY3 499 aaKnown RBP16.49■□□□□ 0.23
RTN3-214ENST00000545432 FGF14Q92915 247 aa16.49■□□□□ 0.23
RTN3-214ENST00000545432 CLDN23Q96B33 292 aa16.49■□□□□ 0.23
RTN3-214ENST00000545432 RNF39Q9H2S5 420 aa16.49■□□□□ 0.23
RTN3-214ENST00000545432 SH3GLB2Q9NR46 395 aa16.49■□□□□ 0.23
RTN3-214ENST00000545432 PRG3Q9Y2Y8 225 aaPredicted RBP16.49■□□□□ 0.23
RTN3-214ENST00000545432 MTCL1Q9Y4B5 1905 aaKnown RBP16.49■□□□□ 0.23
RTN3-214ENST00000545432 FRYLO94915 3013 aa16.48■□□□□ 0.23
RTN3-214ENST00000545432 ARL5CA6NH57 179 aa16.48■□□□□ 0.23
RTN3-214ENST00000545432 PRR5-ARHGAP8B1AHC4 643 aa16.48■□□□□ 0.23
RTN3-214ENST00000545432 ASAP2O43150 1006 aa16.48■□□□□ 0.23
RTN3-214ENST00000545432 SPATA31D3P0C874 917 aa16.48■□□□□ 0.23
RTN3-214ENST00000545432 AXLP30530 894 aa16.48■□□□□ 0.23
RTN3-214ENST00000545432 OR1G1P47890 313 aa16.48■□□□□ 0.23
RTN3-214ENST00000545432 ARHGAP8P85298 464 aa16.48■□□□□ 0.23
RTN3-214ENST00000545432 POU5F1BQ06416 359 aa16.48■□□□□ 0.23
RTN3-214ENST00000545432 PARM1Q6UWI2 310 aa16.48■□□□□ 0.23
RTN3-214ENST00000545432 SPATA31D4Q6ZUB0 917 aa16.48■□□□□ 0.23
RTN3-214ENST00000545432 IFNLR1Q8IU57 520 aaPredicted RBP16.48■□□□□ 0.23
RTN3-214ENST00000545432 CCDC148Q8NFR7 591 aa16.48■□□□□ 0.23
RTN3-214ENST00000545432 KCNB2Q92953 911 aa16.48■□□□□ 0.23
RTN3-214ENST00000545432 CCDC51Q96ER9 411 aa16.48■□□□□ 0.23
RTN3-214ENST00000545432 HINFPQ9BQA5 517 aa16.48■□□□□ 0.23
RTN3-214ENST00000545432 RNF26Q9BY78 433 aaPredicted RBP16.48■□□□□ 0.23
RTN3-214ENST00000545432 C22orf23Q9BZE7 217 aa16.48■□□□□ 0.23
RTN3-214ENST00000545432 GPR62Q9BZJ7 368 aa16.48■□□□□ 0.23
RTN3-214ENST00000545432 EPC1Q9H2F5 836 aa16.48■□□□□ 0.23
RTN3-214ENST00000545432 ANO2Q9NQ90 1003 aa16.48■□□□□ 0.23
RTN3-214ENST00000545432 CDH7Q9ULB5 785 aa16.48■□□□□ 0.23
RTN3-214ENST00000545432 IPPQ9Y573 584 aa16.48■□□□□ 0.23
RTN3-214ENST00000545432 F8W810 466 aa16.47■□□□□ 0.23
RTN3-214ENST00000545432 M0R2N6 131 aa16.47■□□□□ 0.23
RTN3-214ENST00000545432 POU2F2P09086 479 aa16.47■□□□□ 0.23
RTN3-214ENST00000545432 HMGB1P09429 215 aaKnown RBP16.47■□□□□ 0.23
RTN3-214ENST00000545432 ITGA4P13612 1032 aa16.47■□□□□ 0.23
RTN3-214ENST00000545432 NPEPPSP55786 919 aa16.47■□□□□ 0.23
RTN3-214ENST00000545432 LAMTOR4Q0VGL1 99 aa16.47■□□□□ 0.23
RTN3-214ENST00000545432 FZD5Q13467 585 aa16.47■□□□□ 0.23
RTN3-214ENST00000545432 KRT32Q14532 448 aa16.47■□□□□ 0.23
RTN3-214ENST00000545432 USP41Q3LFD5 358 aa16.47■□□□□ 0.23
RTN3-214ENST00000545432 SLC44A4Q53GD3 710 aa16.47■□□□□ 0.23
RTN3-214ENST00000545432 MAMSTRQ6ZN01 415 aa16.47■□□□□ 0.23
RTN3-214ENST00000545432 PALB2Q86YC2 1186 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms