RNA–Protein interactions for RNA: ENST00000544983.1

SNHG1-221, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 870 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-221ENST00000544983 PRR29P0C7W0 189 aa12.89□□□□□ -0.35
SNHG1-221ENST00000544983 FGFR4P22455 802 aa12.89□□□□□ -0.35
SNHG1-221ENST00000544983 CASP1P29466 404 aa12.89□□□□□ -0.35
SNHG1-221ENST00000544983 NMT1P30419 496 aaKnown RBP12.89□□□□□ -0.35
SNHG1-221ENST00000544983 SARSP49591 514 aaKnown RBP12.89□□□□□ -0.35
SNHG1-221ENST00000544983 WDR5P61964 334 aaKnown RBP12.89□□□□□ -0.35
SNHG1-221ENST00000544983 BMT2Q1RMZ1 405 aa12.89□□□□□ -0.35
SNHG1-221ENST00000544983 TMEM132AQ24JP5 1023 aa12.89□□□□□ -0.35
SNHG1-221ENST00000544983 DCAF4L1Q3SXM0 396 aa12.89□□□□□ -0.35
SNHG1-221ENST00000544983 COBLL1Q53SF7 1204 aa12.89□□□□□ -0.35
SNHG1-221ENST00000544983 SLFN12LQ6IEE8 588 aa12.89□□□□□ -0.35
SNHG1-221ENST00000544983 EPM2AIP1Q7L775 607 aaPredicted RBP12.89□□□□□ -0.35
SNHG1-221ENST00000544983 TAS1R3Q7RTX0 852 aa12.89□□□□□ -0.35
SNHG1-221ENST00000544983 TDHQ8IZJ6 230 aa12.89□□□□□ -0.35
SNHG1-221ENST00000544983 GOLGA5Q8TBA6 731 aa12.89□□□□□ -0.35
SNHG1-221ENST00000544983 ZNF507Q8TCN5 953 aa12.89□□□□□ -0.35
SNHG1-221ENST00000544983 GPT2Q8TD30 523 aa12.89□□□□□ -0.35
SNHG1-221ENST00000544983 PGBD4Q96DM1 585 aa12.89□□□□□ -0.35
SNHG1-221ENST00000544983 BICD1Q96G01 975 aa12.89□□□□□ -0.35
SNHG1-221ENST00000544983 RNPC3Q96LT9 517 aaKnown RBP12.89□□□□□ -0.35
SNHG1-221ENST00000544983 TRIM6Q9C030 488 aaPredicted RBP12.89□□□□□ -0.35
SNHG1-221ENST00000544983 PRO3102Q9H379 93 aa12.89□□□□□ -0.35
SNHG1-221ENST00000544983 UBN1Q9NPG3 1134 aa12.89□□□□□ -0.35
SNHG1-221ENST00000544983 TBC1D7Q9P0N9 293 aa12.89□□□□□ -0.35
SNHG1-221ENST00000544983 KIAA1468Q9P260 1216 aa12.89□□□□□ -0.35
SNHG1-221ENST00000544983 TTC3P53804 2025 aa12.89□□□□□ -0.35
SNHG1-221ENST00000544983 MICAL3Q7RTP6 2002 aa12.88□□□□□ -0.35
SNHG1-221ENST00000544983 ZBBXA8MT70 800 aa12.88□□□□□ -0.35
SNHG1-221ENST00000544983 KIAA0391O15091 583 aaKnown RBP12.88□□□□□ -0.35
SNHG1-221ENST00000544983 CLDN3O15551 220 aa12.88□□□□□ -0.35
SNHG1-221ENST00000544983 PROZP22891 400 aa12.88□□□□□ -0.35
SNHG1-221ENST00000544983 LIG4P49917 911 aa12.88□□□□□ -0.35
SNHG1-221ENST00000544983 KLHL40Q2TBA0 621 aa12.88□□□□□ -0.35
SNHG1-221ENST00000544983 ZC2HC1CQ53FD0 456 aaPredicted RBP12.88□□□□□ -0.35
SNHG1-221ENST00000544983 ZNF658Q5TYW1 1059 aaPredicted RBP12.88□□□□□ -0.35
SNHG1-221ENST00000544983 MPZL3Q6UWV2 235 aa12.88□□□□□ -0.35
SNHG1-221ENST00000544983 RTN4RL1Q86UN2 441 aaPredicted RBP12.88□□□□□ -0.35
SNHG1-221ENST00000544983 NPAS4Q8IUM7 802 aa12.88□□□□□ -0.35
SNHG1-221ENST00000544983 SYCP3Q8IZU3 236 aa12.88□□□□□ -0.35
SNHG1-221ENST00000544983 GUF1Q8N442 669 aaKnown RBP12.88□□□□□ -0.35
SNHG1-221ENST00000544983 TOP1MTQ969P6 601 aa12.88□□□□□ -0.35
SNHG1-221ENST00000544983 TARS2Q9BW92 718 aaKnown RBP12.88□□□□□ -0.35
SNHG1-221ENST00000544983 PDZD7Q9H5P4 517 aa12.88□□□□□ -0.35
SNHG1-221ENST00000544983 FAM105AQ9NUU6 356 aa12.88□□□□□ -0.35
SNHG1-221ENST00000544983 TMEM161AQ9NX61 479 aa12.88□□□□□ -0.35
SNHG1-221ENST00000544983 ZMYM2Q9UBW7 1377 aa12.88□□□□□ -0.35
SNHG1-221ENST00000544983 LOC101059915A0A1B0GWI6 518 aaPredicted RBP12.87□□□□□ -0.35
SNHG1-221ENST00000544983 B4GALT5O43286 388 aa12.87□□□□□ -0.35
SNHG1-221ENST00000544983 MGEA5O60502 916 aa12.87□□□□□ -0.35
SNHG1-221ENST00000544983 MCF2P10911 925 aa12.87□□□□□ -0.35
SNHG1-221ENST00000544983 ATP2A2P16615 1042 aaKnown RBP12.87□□□□□ -0.35
SNHG1-221ENST00000544983 POU5F1Q01860 360 aaKnown RBP12.87□□□□□ -0.35
SNHG1-221ENST00000544983 MCL1Q07820 350 aa12.87□□□□□ -0.35
SNHG1-221ENST00000544983 STK4Q13043 487 aa12.87□□□□□ -0.35
SNHG1-221ENST00000544983 STIM1Q13586 685 aa12.87□□□□□ -0.35
SNHG1-221ENST00000544983 SHHQ15465 462 aa12.87□□□□□ -0.35
SNHG1-221ENST00000544983 CAMK4Q16566 473 aa12.87□□□□□ -0.35
SNHG1-221ENST00000544983 KNOP1Q1ED39 458 aaKnown RBP12.87□□□□□ -0.35
SNHG1-221ENST00000544983 CCDC183Q5T5S1 534 aa12.87□□□□□ -0.35
SNHG1-221ENST00000544983 HS2ST1Q7LGA3 356 aa12.87□□□□□ -0.35
SNHG1-221ENST00000544983 MRPL10Q7Z7H8 261 aaKnown RBP12.87□□□□□ -0.35
SNHG1-221ENST00000544983 ECHDC2Q86YB7 292 aa12.87□□□□□ -0.35
SNHG1-221ENST00000544983 MYOCDQ8IZQ8 938 aa12.87□□□□□ -0.35
SNHG1-221ENST00000544983 TMEM174Q8WUU8 243 aa12.87□□□□□ -0.35
SNHG1-221ENST00000544983 CPB2Q96IY4 423 aa12.87□□□□□ -0.35
SNHG1-221ENST00000544983 TCHPQ9BT92 498 aa12.87□□□□□ -0.35
SNHG1-221ENST00000544983 GBP3Q9H0R5 595 aa12.87□□□□□ -0.35
SNHG1-221ENST00000544983 PTPRHQ9HD43 1115 aa12.87□□□□□ -0.35
SNHG1-221ENST00000544983 SLC39A2Q9NP94 309 aa12.87□□□□□ -0.35
SNHG1-221ENST00000544983 LRFN2Q9ULH4 789 aa12.87□□□□□ -0.35
SNHG1-221ENST00000544983 COLQQ9Y215 455 aaPredicted RBP12.87□□□□□ -0.35
SNHG1-221ENST00000544983 PCDHB7Q9Y5E2 793 aa12.87□□□□□ -0.35
SNHG1-221ENST00000544983 PCDHB2Q9Y5E7 798 aa12.87□□□□□ -0.35
SNHG1-221ENST00000544983 STYXL1Q9Y6J8 313 aa12.87□□□□□ -0.35
SNHG1-221ENST00000544983 MYBP10242 640 aa12.86□□□□□ -0.35
SNHG1-221ENST00000544983 GARTP22102 1010 aa12.86□□□□□ -0.35
SNHG1-221ENST00000544983 CASP5P51878 434 aa12.86□□□□□ -0.35
SNHG1-221ENST00000544983 NOLC1Q14978 699 aaKnown RBP eCLIP12.86□□□□□ -0.356e-19■■■■■ 41.4
SNHG1-221ENST00000544983 TCTN1Q2MV58 587 aa12.86□□□□□ -0.35
SNHG1-221ENST00000544983 ZNF568Q3ZCX4 644 aa12.86□□□□□ -0.35
SNHG1-221ENST00000544983 C9orf50Q5SZB4 431 aa12.86□□□□□ -0.35
SNHG1-221ENST00000544983 UBXN11Q5T124 520 aa12.86□□□□□ -0.35
SNHG1-221ENST00000544983 CHRDL2Q6WN34 429 aa12.86□□□□□ -0.35
SNHG1-221ENST00000544983 CRIPAKQ8N1N5 446 aa12.86□□□□□ -0.35
SNHG1-221ENST00000544983 KIAA0895Q8NCT3 520 aa12.86□□□□□ -0.35
SNHG1-221ENST00000544983 SCFD1Q8WVM8 642 aa12.86□□□□□ -0.35
SNHG1-221ENST00000544983 LINC01599Q8WXQ3 324 aa12.86□□□□□ -0.35
SNHG1-221ENST00000544983 A0A0B4J269 797 aa12.85□□□□□ -0.35
SNHG1-221ENST00000544983 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.85□□□□□ -0.35
SNHG1-221ENST00000544983 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.85□□□□□ -0.35
SNHG1-221ENST00000544983 CARNS1A5YM72 827 aa12.85□□□□□ -0.35
SNHG1-221ENST00000544983 PDXKO00764 312 aa12.85□□□□□ -0.35
SNHG1-221ENST00000544983 PRPF6O94906 941 aaKnown RBP12.85□□□□□ -0.35
SNHG1-221ENST00000544983 LETM1O95202 739 aaPredicted RBP12.85□□□□□ -0.35
SNHG1-221ENST00000544983 GJB5O95377 273 aa12.85□□□□□ -0.35
SNHG1-221ENST00000544983 LDHAP00338 332 aaKnown RBP12.85□□□□□ -0.35
SNHG1-221ENST00000544983 MORC3Q14149 939 aa12.85□□□□□ -0.35
SNHG1-221ENST00000544983 MYBPC2Q14324 1141 aa12.85□□□□□ -0.35
SNHG1-221ENST00000544983 FOXR2Q6PJQ5 311 aa12.85□□□□□ -0.35
SNHG1-221ENST00000544983 RBM43Q6ZSC3 357 aaKnown RBP12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms