RNA–Protein interactions for RNA: ENST00000544964.6

ACTN1-206, Transcript of actinin alpha 1, humanhuman

TSL 5

Gene ACTN1, Length 891 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-206ENST00000544964 TMEM221A6NGB7 291 aa13.83□□□□□ -0.2
ACTN1-206ENST00000544964 DDX11L8A8MPP1 907 aa13.83□□□□□ -0.2
ACTN1-206ENST00000544964 NT5C1B-RDH14C9J2C7 533 aa13.83□□□□□ -0.2
ACTN1-206ENST00000544964 M0R296 226 aa13.83□□□□□ -0.2
ACTN1-206ENST00000544964 ZBTB39O15060 712 aa13.83□□□□□ -0.2
ACTN1-206ENST00000544964 SRGAP2BP0DMP2 458 aa13.83□□□□□ -0.2
ACTN1-206ENST00000544964 NPEPPSP55786 919 aa13.83□□□□□ -0.2
ACTN1-206ENST00000544964 KRT17Q04695 432 aa13.83□□□□□ -0.2
ACTN1-206ENST00000544964 SMC1AQ14683 1233 aaKnown RBP13.83□□□□□ -0.2
ACTN1-206ENST00000544964 ECM1Q16610 540 aa13.83□□□□□ -0.2
ACTN1-206ENST00000544964 KRT79Q5XKE5 535 aa13.83□□□□□ -0.2
ACTN1-206ENST00000544964 HAUS3Q68CZ6 603 aa13.83□□□□□ -0.2
ACTN1-206ENST00000544964 TWF2Q6IBS0 349 aaKnown RBP13.83□□□□□ -0.2
ACTN1-206ENST00000544964 TMC7Q7Z402 723 aa13.83□□□□□ -0.2
ACTN1-206ENST00000544964 BMP8AQ7Z5Y6 402 aa13.83□□□□□ -0.2
ACTN1-206ENST00000544964 CABP7Q86V35 215 aa13.83□□□□□ -0.2
ACTN1-206ENST00000544964 MRPL43Q8N983 215 aaKnown RBP13.83□□□□□ -0.2
ACTN1-206ENST00000544964 EPSTI1Q96J88 318 aa13.83□□□□□ -0.2
ACTN1-206ENST00000544964 PLIN2Q99541 437 aa13.83□□□□□ -0.2
ACTN1-206ENST00000544964 POLR3CQ9BUI4 534 aaPredicted RBP13.83□□□□□ -0.2
ACTN1-206ENST00000544964 APOL5Q9BWW9 433 aa13.83□□□□□ -0.2
ACTN1-206ENST00000544964 SCAND2PQ9GZW5 306 aaPredicted RBP13.83□□□□□ -0.2
ACTN1-206ENST00000544964 ZBP1Q9H171 429 aa13.83□□□□□ -0.2
ACTN1-206ENST00000544964 ZSWIM4Q9H7M6 989 aa13.83□□□□□ -0.2
ACTN1-206ENST00000544964 AGPAT5Q9NUQ2 364 aa13.83□□□□□ -0.2
ACTN1-206ENST00000544964 FAM105AQ9NUU6 356 aa13.83□□□□□ -0.2
ACTN1-206ENST00000544964 TBC1D13Q9NVG8 400 aa13.83□□□□□ -0.2
ACTN1-206ENST00000544964 CUTAO60888 179 aa13.82□□□□□ -0.2
ACTN1-206ENST00000544964 CLASP2O75122 1294 aaKnown RBP13.82□□□□□ -0.2
ACTN1-206ENST00000544964 ZNF623O75123 536 aa13.82□□□□□ -0.2
ACTN1-206ENST00000544964 ZC3H11AO75152 810 aaKnown RBP eCLIP13.82□□□□□ -0.2
ACTN1-206ENST00000544964 HOXB8P17481 243 aaPredicted RBP13.82□□□□□ -0.2
ACTN1-206ENST00000544964 RPA1P27694 616 aa13.82□□□□□ -0.2
ACTN1-206ENST00000544964 UBA7P41226 1012 aa13.82□□□□□ -0.2
ACTN1-206ENST00000544964 DNM2P50570 870 aa13.82□□□□□ -0.2
ACTN1-206ENST00000544964 CDC42EP1Q00587 391 aa13.82□□□□□ -0.2
ACTN1-206ENST00000544964 LONRF3Q496Y0 759 aa13.82□□□□□ -0.2
ACTN1-206ENST00000544964 AXDND1Q5T1B0 1012 aaPredicted RBP13.82□□□□□ -0.2
ACTN1-206ENST00000544964 POTEGQ6S5H5 508 aa13.82□□□□□ -0.2
ACTN1-206ENST00000544964 RSPH1Q8WYR4 309 aa13.82□□□□□ -0.2
ACTN1-206ENST00000544964 CASP10Q92851 521 aa13.82□□□□□ -0.2
ACTN1-206ENST00000544964 ASIC4Q96FT7 647 aa13.82□□□□□ -0.2
ACTN1-206ENST00000544964 AK8Q96MA6 479 aa13.82□□□□□ -0.2
ACTN1-206ENST00000544964 MFSD14AQ96MC6 490 aa13.82□□□□□ -0.2
ACTN1-206ENST00000544964 PNMA5Q96PV4 448 aa13.82□□□□□ -0.2
ACTN1-206ENST00000544964 VN1R3Q9BXE9 311 aa13.82□□□□□ -0.2
ACTN1-206ENST00000544964 DHX33Q9H6R0 707 aaKnown RBP13.82□□□□□ -0.2
ACTN1-206ENST00000544964 NRDE2Q9H7Z3 1164 aa13.82□□□□□ -0.2
ACTN1-206ENST00000544964 MINDY3Q9H8M7 445 aa13.82□□□□□ -0.2
ACTN1-206ENST00000544964 TUFT1Q9NNX1 390 aa13.82□□□□□ -0.2
ACTN1-206ENST00000544964 COL4A3BPQ9Y5P4 624 aa13.82□□□□□ -0.2
ACTN1-206ENST00000544964 MYO15AQ9UKN7 3530 aa13.82□□□□□ -0.2
ACTN1-206ENST00000544964 DKC1O60832 514 aaKnown RBP eCLIP13.81□□□□□ -0.2
ACTN1-206ENST00000544964 SP100P23497 879 aaPredicted RBP13.81□□□□□ -0.2
ACTN1-206ENST00000544964 ALDH7A1P49419 539 aaKnown RBP13.81□□□□□ -0.2
ACTN1-206ENST00000544964 RAB27AP51159 221 aa13.81□□□□□ -0.2
ACTN1-206ENST00000544964 KARSQ15046 597 aaKnown RBP13.81□□□□□ -0.2
ACTN1-206ENST00000544964 PTPN21Q16825 1174 aa13.81□□□□□ -0.2
ACTN1-206ENST00000544964 NOMO2Q5JPE7 1267 aa13.81□□□□□ -0.2
ACTN1-206ENST00000544964 SHC4Q6S5L8 630 aa13.81□□□□□ -0.2
ACTN1-206ENST00000544964 AGMOQ6ZNB7 445 aa13.81□□□□□ -0.2
ACTN1-206ENST00000544964 CATSPER4Q7RTX7 472 aa13.81□□□□□ -0.2
ACTN1-206ENST00000544964 C4orf19Q8IY42 314 aa13.81□□□□□ -0.2
ACTN1-206ENST00000544964 PRSS33Q8NF86 280 aa13.81□□□□□ -0.2
ACTN1-206ENST00000544964 FEZF2Q8TBJ5 459 aa13.81□□□□□ -0.2
ACTN1-206ENST00000544964 PIGOQ8TEQ8 1089 aa13.81□□□□□ -0.2
ACTN1-206ENST00000544964 AUTS2Q8WXX7 1259 aa13.81□□□□□ -0.2
ACTN1-206ENST00000544964 SLC7A3Q8WY07 619 aa13.81□□□□□ -0.2
ACTN1-206ENST00000544964 TMEM169Q96HH4 297 aa13.81□□□□□ -0.2
ACTN1-206ENST00000544964 POMKQ9H5K3 350 aa13.81□□□□□ -0.2
ACTN1-206ENST00000544964 BMP2KQ9NSY1 1161 aaPredicted RBP13.81□□□□□ -0.2
ACTN1-206ENST00000544964 DDX19AQ9NUU7 478 aaKnown RBP13.81□□□□□ -0.2
ACTN1-206ENST00000544964 DNAJB4Q9UDY4 337 aa13.81□□□□□ -0.2
ACTN1-206ENST00000544964 KIAA1024Q9UPX6 916 aa13.81□□□□□ -0.2
ACTN1-206ENST00000544964 INPP5FQ9Y2H2 1132 aa13.81□□□□□ -0.2
ACTN1-206ENST00000544964 STK24Q9Y6E0 443 aa13.81□□□□□ -0.2
ACTN1-206ENST00000544964 TDRD15B5MCY1 1934 aaKnown RBP13.81□□□□□ -0.2
ACTN1-206ENST00000544964 PLXNA3P51805 1871 aa13.8□□□□□ -0.2
ACTN1-206ENST00000544964 OFD1O75665 1012 aa13.8□□□□□ -0.2
ACTN1-206ENST00000544964 LYPLA2O95372 231 aa13.8□□□□□ -0.2
ACTN1-206ENST00000544964 GALTP07902 379 aa13.8□□□□□ -0.2
ACTN1-206ENST00000544964 HOXA11P31270 313 aaPredicted RBP13.8□□□□□ -0.2
ACTN1-206ENST00000544964 YWHABP31946 246 aaKnown RBP13.8□□□□□ -0.2
ACTN1-206ENST00000544964 RFC5P40937 340 aa13.8□□□□□ -0.2
ACTN1-206ENST00000544964 AFF1P51825 1210 aaKnown RBP13.8□□□□□ -0.2
ACTN1-206ENST00000544964 POLGP54098 1239 aaPredicted RBP13.8□□□□□ -0.2
ACTN1-206ENST00000544964 SIGLEC14Q08ET2 396 aa13.8□□□□□ -0.2
ACTN1-206ENST00000544964 EMC2Q15006 297 aa13.8□□□□□ -0.2
ACTN1-206ENST00000544964 UBXN11Q5T124 520 aa13.8□□□□□ -0.2
ACTN1-206ENST00000544964 IER5LQ5T953 404 aa13.8□□□□□ -0.2
ACTN1-206ENST00000544964 GLB1LQ6UWU2 654 aa13.8□□□□□ -0.2
ACTN1-206ENST00000544964 DDX53Q86TM3 631 aaKnown RBP13.8□□□□□ -0.2
ACTN1-206ENST00000544964 ALYREFQ86V81 257 aaKnown RBP13.8□□□□□ -0.2
ACTN1-206ENST00000544964 VPS52Q8N1B4 723 aa13.8□□□□□ -0.2
ACTN1-206ENST00000544964 RASSF8Q8NHQ8 419 aa13.8□□□□□ -0.2
ACTN1-206ENST00000544964 PSPC1Q8WXF1 523 aaKnown RBP13.8□□□□□ -0.2
ACTN1-206ENST00000544964 TMEM143Q96AN5 459 aa13.8□□□□□ -0.2
ACTN1-206ENST00000544964 IGSF21Q96ID5 467 aa13.8□□□□□ -0.2
ACTN1-206ENST00000544964 CDK5RAP3Q96JB5 506 aa13.8□□□□□ -0.2
ACTN1-206ENST00000544964 CEP170P1Q96L14 293 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms