RNA–Protein interactions for RNA: ENST00000544344.5

CD4-212, Transcript of CD4 molecule, humanhuman

TSL 2

Gene CD4, Length 1,056 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD4-212ENST00000544344 SPATA31D4Q6ZUB0 917 aa17.33■□□□□ 0.36
CD4-212ENST00000544344 SRGAP1Q7Z6B7 1085 aa17.33■□□□□ 0.36
CD4-212ENST00000544344 FBXL16Q8N461 479 aa17.33■□□□□ 0.36
CD4-212ENST00000544344 PRPF31Q8WWY3 499 aaKnown RBP17.33■□□□□ 0.36
CD4-212ENST00000544344 SLC26A6Q9BXS9 759 aa17.33■□□□□ 0.36
CD4-212ENST00000544344 AGXT2Q9BYV1 514 aa17.33■□□□□ 0.36
CD4-212ENST00000544344 RNF39Q9H2S5 420 aa17.33■□□□□ 0.36
CD4-212ENST00000544344 SH3GLB2Q9NR46 395 aa17.33■□□□□ 0.36
CD4-212ENST00000544344 CHST7Q9NS84 486 aa17.33■□□□□ 0.36
CD4-212ENST00000544344 MIOSQ9NXC5 875 aa17.33■□□□□ 0.36
CD4-212ENST00000544344 WRAP73Q9P2S5 460 aaPredicted RBP17.33■□□□□ 0.36
CD4-212ENST00000544344 TDRD15B5MCY1 1934 aaKnown RBP17.33■□□□□ 0.36
CD4-212ENST00000544344 COL4A3Q01955 1670 aa17.32■□□□□ 0.36
CD4-212ENST00000544344 POTEMA6NI47 508 aa17.32■□□□□ 0.36
CD4-212ENST00000544344 IRX6P78412 446 aaPredicted RBP17.32■□□□□ 0.36
CD4-212ENST00000544344 FGD1P98174 961 aa17.32■□□□□ 0.36
CD4-212ENST00000544344 HTR4Q13639 388 aa17.32■□□□□ 0.36
CD4-212ENST00000544344 NPY5RQ15761 445 aa17.32■□□□□ 0.36
CD4-212ENST00000544344 SPECC1Q5M775 1068 aa17.32■□□□□ 0.36
CD4-212ENST00000544344 DGLUCYQ7Z3D6 616 aa17.32■□□□□ 0.36
CD4-212ENST00000544344 SKAP1Q86WV1 359 aa17.32■□□□□ 0.36
CD4-212ENST00000544344 MAML2Q8IZL2 1156 aaPredicted RBP17.32■□□□□ 0.36
CD4-212ENST00000544344 HDAC7Q8WUI4 952 aa17.32■□□□□ 0.36
CD4-212ENST00000544344 TMEM143Q96AN5 459 aa17.32■□□□□ 0.36
CD4-212ENST00000544344 JPH2Q9BR39 696 aaPredicted RBP17.32■□□□□ 0.36
CD4-212ENST00000544344 NT5C3AQ9H0P0 336 aa17.32■□□□□ 0.36
CD4-212ENST00000544344 DHX33Q9H6R0 707 aaKnown RBP17.32■□□□□ 0.36
CD4-212ENST00000544344 ARHGEF3Q9NR81 526 aa17.32■□□□□ 0.36
CD4-212ENST00000544344 SLC2A4RGQ9NR83 387 aa17.32■□□□□ 0.36
CD4-212ENST00000544344 SSX2IPQ9Y2D8 614 aa17.32■□□□□ 0.36
CD4-212ENST00000544344 SIT1Q9Y3P8 196 aa17.32■□□□□ 0.36
CD4-212ENST00000544344 ARL5CA6NH57 179 aa17.31■□□□□ 0.36
CD4-212ENST00000544344 C1RP00736 705 aa17.31■□□□□ 0.36
CD4-212ENST00000544344 SRGAP2CP0DJJ0 459 aa17.31■□□□□ 0.36
CD4-212ENST00000544344 OR1G1P47890 313 aa17.31■□□□□ 0.36
CD4-212ENST00000544344 AKAP17AQ02040 695 aaKnown RBP17.31■□□□□ 0.36
CD4-212ENST00000544344 LAMTOR4Q0VGL1 99 aa17.31■□□□□ 0.36
CD4-212ENST00000544344 LILRA6Q6PI73 481 aa17.31■□□□□ 0.36
CD4-212ENST00000544344 C1orf210Q8IVY1 113 aa17.31■□□□□ 0.36
CD4-212ENST00000544344 DCLK2Q8N568 766 aa17.31■□□□□ 0.36
CD4-212ENST00000544344 ST13P5Q8NFI4 369 aaPredicted RBP17.31■□□□□ 0.36
CD4-212ENST00000544344 B3GALT6Q96L58 329 aa17.31■□□□□ 0.36
CD4-212ENST00000544344 GAD1Q99259 594 aa17.31■□□□□ 0.36
CD4-212ENST00000544344 RPP25Q9BUL9 199 aaKnown RBP17.31■□□□□ 0.36
CD4-212ENST00000544344 EIF2AQ9BY44 585 aaKnown RBP17.31■□□□□ 0.36
CD4-212ENST00000544344 NCOA5Q9HCD5 579 aaKnown RBP17.31■□□□□ 0.36
CD4-212ENST00000544344 DLL3Q9NYJ7 618 aa17.31■□□□□ 0.36
CD4-212ENST00000544344 DPP7Q9UHL4 492 aa17.31■□□□□ 0.36
CD4-212ENST00000544344 VAV3Q9UKW4 847 aa17.31■□□□□ 0.36
CD4-212ENST00000544344 PCDHA4Q9UN74 947 aa17.31■□□□□ 0.36
CD4-212ENST00000544344 IPPQ9Y573 584 aa17.31■□□□□ 0.36
CD4-212ENST00000544344 MYH15Q9Y2K3 1946 aa17.31■□□□□ 0.36
CD4-212ENST00000544344 EPG5Q9HCE0 2579 aa17.31■□□□□ 0.36
CD4-212ENST00000544344 ARID2Q68CP9 1835 aa17.31■□□□□ 0.36
CD4-212ENST00000544344 TGM5O43548 720 aa17.3■□□□□ 0.36
CD4-212ENST00000544344 SLC37A4O43826 429 aa17.3■□□□□ 0.36
CD4-212ENST00000544344 LRRN2O75325 713 aa17.3■□□□□ 0.36
CD4-212ENST00000544344 ITGA4P13612 1032 aa17.3■□□□□ 0.36
CD4-212ENST00000544344 MLH1P40692 756 aa17.3■□□□□ 0.36
CD4-212ENST00000544344 NLRP5P59047 1200 aa17.3■□□□□ 0.36
CD4-212ENST00000544344 PUM1Q14671 1186 aaKnown RBP eCLIP17.3■□□□□ 0.36
CD4-212ENST00000544344 MOXD1Q6UVY6 613 aa17.3■□□□□ 0.36
CD4-212ENST00000544344 PALB2Q86YC2 1186 aa17.3■□□□□ 0.36
CD4-212ENST00000544344 SUMF1Q8NBK3 374 aa17.3■□□□□ 0.36
CD4-212ENST00000544344 GSTCDQ8NEC7 633 aa17.3■□□□□ 0.36
CD4-212ENST00000544344 PSPC1Q8WXF1 523 aaKnown RBP17.3■□□□□ 0.36
CD4-212ENST00000544344 SLC7A3Q8WY07 619 aa17.3■□□□□ 0.36
CD4-212ENST00000544344 ZFP42Q96MM3 310 aa17.3■□□□□ 0.36
CD4-212ENST00000544344 GPR62Q9BZJ7 368 aa17.3■□□□□ 0.36
CD4-212ENST00000544344 PRKD2Q9BZL6 878 aa17.3■□□□□ 0.36
CD4-212ENST00000544344 FOXQ1Q9C009 403 aa17.3■□□□□ 0.36
CD4-212ENST00000544344 PLEKHA4Q9H4M7 779 aa17.3■□□□□ 0.36
CD4-212ENST00000544344 UBN1Q9NPG3 1134 aa17.3■□□□□ 0.36
CD4-212ENST00000544344 ZDHHC7Q9NXF8 308 aa17.3■□□□□ 0.36
CD4-212ENST00000544344 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP17.3■□□□□ 0.36
CD4-212ENST00000544344 HES2Q9Y543 173 aa17.3■□□□□ 0.36
CD4-212ENST00000544344 NUMBLQ9Y6R0 609 aa17.3■□□□□ 0.36
CD4-212ENST00000544344 MIA3Q5JRA6 1907 aa17.29■□□□□ 0.36
CD4-212ENST00000544344 CACNA1BQ00975 2339 aa17.29■□□□□ 0.36
CD4-212ENST00000544344 GAS2O43903 313 aaKnown RBP17.29■□□□□ 0.36
CD4-212ENST00000544344 TSPAN1O60635 241 aa17.29■□□□□ 0.36
CD4-212ENST00000544344 RFX1P22670 979 aa17.29■□□□□ 0.36
CD4-212ENST00000544344 PDIA3P30101 505 aaKnown RBP17.29■□□□□ 0.36
CD4-212ENST00000544344 QARSP47897 775 aaKnown RBP17.29■□□□□ 0.36
CD4-212ENST00000544344 SCNN1GP51170 649 aa17.29■□□□□ 0.36
CD4-212ENST00000544344 EVCP57679 992 aa17.29■□□□□ 0.36
CD4-212ENST00000544344 STARD6P59095 220 aa17.29■□□□□ 0.36
CD4-212ENST00000544344 PPP2R5CQ13362 524 aa17.29■□□□□ 0.36
CD4-212ENST00000544344 ELMSAN1Q6PJG2 1045 aa17.29■□□□□ 0.36
CD4-212ENST00000544344 DCLRE1AQ6PJP8 1040 aa17.29■□□□□ 0.36
CD4-212ENST00000544344 GET4Q7L5D6 327 aaPredicted RBP17.29■□□□□ 0.36
CD4-212ENST00000544344 RNF149Q8NC42 400 aa17.29■□□□□ 0.36
CD4-212ENST00000544344 CNNM3Q8NE01 707 aa17.29■□□□□ 0.36
CD4-212ENST00000544344 PJA1Q8NG27 643 aa17.29■□□□□ 0.36
CD4-212ENST00000544344 RUBCNQ92622 972 aa17.29■□□□□ 0.36
CD4-212ENST00000544344 CEP170P1Q96L14 293 aa17.29■□□□□ 0.36
CD4-212ENST00000544344 JAKMIP1Q96N16 626 aaKnown RBP17.29■□□□□ 0.36
CD4-212ENST00000544344 C22orf23Q9BZE7 217 aa17.29■□□□□ 0.36
CD4-212ENST00000544344 BMP2KQ9NSY1 1161 aaPredicted RBP17.29■□□□□ 0.36
CD4-212ENST00000544344 SNX14Q9Y5W7 946 aa17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms