RNA–Protein interactions for RNA: ENST00000543928.5

SP140-213, Transcript of SP140 nuclear body protein, humanhuman

TSL 2

Gene SP140, Length 640 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP140-213ENST00000543928 PDZD7Q9H5P4 517 aa14.96□□□□□ -0.01
SP140-213ENST00000543928 SLC39A2Q9NP94 309 aa14.96□□□□□ -0.01
SP140-213ENST00000543928 PCDHB13Q9Y5F0 798 aa14.96□□□□□ -0.01
SP140-213ENST00000543928 PCDHA5Q9Y5H7 936 aa14.96□□□□□ -0.01
SP140-213ENST00000543928 A0A0U1RQF3 1178 aa14.95□□□□□ -0.02
SP140-213ENST00000543928 HNRNPDLO14979 420 aaKnown RBP14.95□□□□□ -0.02
SP140-213ENST00000543928 N4BP3O15049 544 aa14.95□□□□□ -0.02
SP140-213ENST00000543928 PRPF6O94906 941 aaKnown RBP14.95□□□□□ -0.02
SP140-213ENST00000543928 RHOBTB3O94955 611 aa14.95□□□□□ -0.02
SP140-213ENST00000543928 UPP2O95045 317 aa14.95□□□□□ -0.02
SP140-213ENST00000543928 MBD3O95983 291 aa14.95□□□□□ -0.02
SP140-213ENST00000543928 ATP2A2P16615 1042 aaKnown RBP14.95□□□□□ -0.02
SP140-213ENST00000543928 RAB27AP51159 221 aa14.95□□□□□ -0.02
SP140-213ENST00000543928 KCNA1Q09470 495 aa14.95□□□□□ -0.02
SP140-213ENST00000543928 STK4Q13043 487 aa14.95□□□□□ -0.02
SP140-213ENST00000543928 PSMD2Q13200 908 aa14.95□□□□□ -0.02
SP140-213ENST00000543928 KCNB1Q14721 858 aa14.95□□□□□ -0.02
SP140-213ENST00000543928 UBXN11Q5T124 520 aa14.95□□□□□ -0.02
SP140-213ENST00000543928 L1TD1Q5T7N2 865 aaKnown RBP14.95□□□□□ -0.02
SP140-213ENST00000543928 EEF1DP3Q658K8 133 aa14.95□□□□□ -0.02
SP140-213ENST00000543928 SLC27A1Q6PCB7 646 aa14.95□□□□□ -0.02
SP140-213ENST00000543928 EPM2AIP1Q7L775 607 aaPredicted RBP14.95□□□□□ -0.02
SP140-213ENST00000543928 MAP4K3Q8IVH8 894 aa14.95□□□□□ -0.02
SP140-213ENST00000543928 TRAIPQ9BWF2 469 aa14.95□□□□□ -0.02
SP140-213ENST00000543928 EIF2AQ9BY44 585 aaKnown RBP14.95□□□□□ -0.02
SP140-213ENST00000543928 CLSTN2Q9H4D0 955 aa14.95□□□□□ -0.02
SP140-213ENST00000543928 FAM105AQ9NUU6 356 aa14.95□□□□□ -0.02
SP140-213ENST00000543928 TNFSF13BQ9Y275 285 aa14.95□□□□□ -0.02
SP140-213ENST00000543928 TRIOBPQ9H2D6 2365 aa14.94□□□□□ -0.02
SP140-213ENST00000543928 A0A1W2PPC1 479 aa14.94□□□□□ -0.02
SP140-213ENST00000543928 NPTXRO95502 500 aa14.94□□□□□ -0.02
SP140-213ENST00000543928 PIGRP01833 764 aa14.94□□□□□ -0.02
SP140-213ENST00000543928 LIG4P49917 911 aa14.94□□□□□ -0.02
SP140-213ENST00000543928 FAM189BP81408 668 aa14.94□□□□□ -0.02
SP140-213ENST00000543928 FAM117BQ6P1L5 589 aa14.94□□□□□ -0.02
SP140-213ENST00000543928 ZPBP2Q6X784 338 aa14.94□□□□□ -0.02
SP140-213ENST00000543928 ECHDC2Q86YB7 292 aa14.94□□□□□ -0.02
SP140-213ENST00000543928 HERC6Q8IVU3 1022 aa14.94□□□□□ -0.02
SP140-213ENST00000543928 RNF169Q8NCN4 708 aa14.94□□□□□ -0.02
SP140-213ENST00000543928 KIAA0895Q8NCT3 520 aa14.94□□□□□ -0.02
SP140-213ENST00000543928 SPATA20Q8TB22 786 aa14.94□□□□□ -0.02
SP140-213ENST00000543928 PHOSPHO2Q8TCD6 241 aa14.94□□□□□ -0.02
SP140-213ENST00000543928 TOP1MTQ969P6 601 aa14.94□□□□□ -0.02
SP140-213ENST00000543928 GSDMAQ96QA5 445 aa14.94□□□□□ -0.02
SP140-213ENST00000543928 ACCSQ96QU6 501 aa14.94□□□□□ -0.02
SP140-213ENST00000543928 ADPGKQ9BRR6 497 aa14.94□□□□□ -0.02
SP140-213ENST00000543928 TRIM6Q9C030 488 aaPredicted RBP14.94□□□□□ -0.02
SP140-213ENST00000543928 NUP62CLQ9H1M0 184 aa14.94□□□□□ -0.02
SP140-213ENST00000543928 PTPRHQ9HD43 1115 aa14.94□□□□□ -0.02
SP140-213ENST00000543928 RMND1Q9NWS8 449 aa14.94□□□□□ -0.02
SP140-213ENST00000543928 LRFN2Q9ULH4 789 aa14.94□□□□□ -0.02
SP140-213ENST00000543928 EXOC7Q9UPT5 735 aa14.94□□□□□ -0.02
SP140-213ENST00000543928 PCDHB7Q9Y5E2 793 aa14.94□□□□□ -0.02
SP140-213ENST00000543928 PCDHB2Q9Y5E7 798 aa14.94□□□□□ -0.02
SP140-213ENST00000543928 PTPRSQ13332 1948 aa14.94□□□□□ -0.02
SP140-213ENST00000543928 GRXCR1A8MXD5 290 aa14.93□□□□□ -0.02
SP140-213ENST00000543928 EIF3DO15371 548 aaKnown RBP eCLIP14.93□□□□□ -0.02
SP140-213ENST00000543928 ZNF623O75123 536 aa14.93□□□□□ -0.02
SP140-213ENST00000543928 TOM1L1O75674 476 aa14.93□□□□□ -0.02
SP140-213ENST00000543928 STAG3L1P0CL83 205 aa14.93□□□□□ -0.02
SP140-213ENST00000543928 SKIP12755 728 aa14.93□□□□□ -0.02
SP140-213ENST00000543928 ATF7P17544 494 aaPredicted RBP14.93□□□□□ -0.02
SP140-213ENST00000543928 ZNF568Q3ZCX4 644 aa14.93□□□□□ -0.02
SP140-213ENST00000543928 FAM109BQ6ICB4 259 aaPredicted RBP14.93□□□□□ -0.02
SP140-213ENST00000543928 ZBTB33Q86T24 672 aa14.93□□□□□ -0.02
SP140-213ENST00000543928 ZNF598Q86UK7 904 aaKnown RBP14.93□□□□□ -0.02
SP140-213ENST00000543928 NPAS4Q8IUM7 802 aa14.93□□□□□ -0.02
SP140-213ENST00000543928 SYCP3Q8IZU3 236 aa14.93□□□□□ -0.02
SP140-213ENST00000543928 CRIPAKQ8N1N5 446 aa14.93□□□□□ -0.02
SP140-213ENST00000543928 SMG8Q8ND04 991 aaKnown RBP14.93□□□□□ -0.02
SP140-213ENST00000543928 ZNF507Q8TCN5 953 aa14.93□□□□□ -0.02
SP140-213ENST00000543928 SCFD1Q8WVM8 642 aa14.93□□□□□ -0.02
SP140-213ENST00000543928 ZBTB45Q96K62 511 aaPredicted RBP14.93□□□□□ -0.02
SP140-213ENST00000543928 TCHPQ9BT92 498 aa14.93□□□□□ -0.02
SP140-213ENST00000543928 IKZF4Q9H2S9 585 aa14.93□□□□□ -0.02
SP140-213ENST00000543928 ELAC1Q9H777 363 aaKnown RBP14.93□□□□□ -0.02
SP140-213ENST00000543928 TMEM161AQ9NX61 479 aa14.93□□□□□ -0.02
SP140-213ENST00000543928 ANKFY1Q9P2R3 1169 aa14.93□□□□□ -0.02
SP140-213ENST00000543928 IPPQ9Y573 584 aa14.93□□□□□ -0.02
SP140-213ENST00000543928 UBE4BO95155 1302 aa14.92□□□□□ -0.02
SP140-213ENST00000543928 TISP43B9A030 160 aa14.92□□□□□ -0.02
SP140-213ENST00000543928 ANKRD63C9JTQ0 380 aa14.92□□□□□ -0.02
SP140-213ENST00000543928 ABLIM1O14639 778 aa14.92□□□□□ -0.02
SP140-213ENST00000543928 GJB5O95377 273 aa14.92□□□□□ -0.02
SP140-213ENST00000543928 EOMESO95936 686 aa14.92□□□□□ -0.02
SP140-213ENST00000543928 PROZP22891 400 aa14.92□□□□□ -0.02
SP140-213ENST00000543928 HOXD13P35453 343 aa14.92□□□□□ -0.02
SP140-213ENST00000543928 MATR3P43243 847 aaKnown RBP eCLIP14.92□□□□□ -0.02
SP140-213ENST00000543928 BMT2Q1RMZ1 405 aa14.92□□□□□ -0.02
SP140-213ENST00000543928 DCAF4L1Q3SXM0 396 aa14.92□□□□□ -0.02
SP140-213ENST00000543928 SLC39A4Q6P5W5 647 aa14.92□□□□□ -0.02
SP140-213ENST00000543928 MPZL3Q6UWV2 235 aa14.92□□□□□ -0.02
SP140-213ENST00000543928 APBB1IPQ7Z5R6 666 aaPredicted RBP14.92□□□□□ -0.02
SP140-213ENST00000543928 MRPL10Q7Z7H8 261 aaKnown RBP14.92□□□□□ -0.02
SP140-213ENST00000543928 NELFCDQ8IXH7 590 aa14.92□□□□□ -0.02
SP140-213ENST00000543928 LPPQ93052 612 aa14.92□□□□□ -0.02
SP140-213ENST00000543928 ZBED2Q9BTP6 218 aa14.92□□□□□ -0.02
SP140-213ENST00000543928 CDT1Q9H211 546 aa14.92□□□□□ -0.02
SP140-213ENST00000543928 NXF3Q9H4D5 531 aaKnown RBP14.92□□□□□ -0.02
SP140-213ENST00000543928 TMEM206Q9H813 350 aa14.92□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms