RNA–Protein interactions for RNA: ENST00000543542.1

LTBR-212, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 367 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-212ENST00000543542 TBX20Q9UMR3 447 aa6.93□□□□□ -1.3
LTBR-212ENST00000543542 USP20Q9Y2K6 914 aa6.93□□□□□ -1.3
LTBR-212ENST00000543542 CNTNAP2Q9UHC6 1331 aa6.93□□□□□ -1.3
LTBR-212ENST00000543542 A0A1W2PPC1 479 aa6.92□□□□□ -1.3
LTBR-212ENST00000543542 FRMD3A2A2Y4 597 aa6.92□□□□□ -1.3
LTBR-212ENST00000543542 TBKBP1A7MCY6 615 aa6.92□□□□□ -1.3
LTBR-212ENST00000543542 GRXCR1A8MXD5 290 aa6.92□□□□□ -1.3
LTBR-212ENST00000543542 CLDN3O15551 220 aa6.92□□□□□ -1.3
LTBR-212ENST00000543542 HOXA2O43364 376 aa6.92□□□□□ -1.3
LTBR-212ENST00000543542 PRPF6O94906 941 aaKnown RBP6.92□□□□□ -1.3
LTBR-212ENST00000543542 EOMESO95936 686 aa6.92□□□□□ -1.3
LTBR-212ENST00000543542 PTMSP20962 102 aa6.92□□□□□ -1.3
LTBR-212ENST00000543542 MCM4P33991 863 aa6.92□□□□□ -1.3
LTBR-212ENST00000543542 RABGGTBP53611 331 aa6.92□□□□□ -1.3
LTBR-212ENST00000543542 YARSP54577 528 aaKnown RBP6.92□□□□□ -1.3
LTBR-212ENST00000543542 OSTNP61366 133 aa6.92□□□□□ -1.3
LTBR-212ENST00000543542 GTF2BQ00403 316 aa6.92□□□□□ -1.3
LTBR-212ENST00000543542 DPYDQ12882 1025 aa6.92□□□□□ -1.3
LTBR-212ENST00000543542 DSC3Q14574 896 aa6.92□□□□□ -1.3
LTBR-212ENST00000543542 AMHR2Q16671 573 aa6.92□□□□□ -1.3
LTBR-212ENST00000543542 DCAF4L1Q3SXM0 396 aa6.92□□□□□ -1.3
LTBR-212ENST00000543542 PAN2Q504Q3 1202 aaKnown RBP6.92□□□□□ -1.3
LTBR-212ENST00000543542 NT5DC1Q5TFE4 455 aa6.92□□□□□ -1.3
LTBR-212ENST00000543542 ISM2Q6H9L7 571 aa6.92□□□□□ -1.3
LTBR-212ENST00000543542 ZNF720Q7Z2F6 126 aa6.92□□□□□ -1.3
LTBR-212ENST00000543542 RTN4RL1Q86UN2 441 aaPredicted RBP6.92□□□□□ -1.3
LTBR-212ENST00000543542 ECHDC2Q86YB7 292 aa6.92□□□□□ -1.3
LTBR-212ENST00000543542 HERC6Q8IVU3 1022 aa6.92□□□□□ -1.3
LTBR-212ENST00000543542 NELFCDQ8IXH7 590 aa6.92□□□□□ -1.3
LTBR-212ENST00000543542 PHOSPHO2Q8TCD6 241 aa6.92□□□□□ -1.3
LTBR-212ENST00000543542 LINC01599Q8WXQ3 324 aa6.92□□□□□ -1.3
LTBR-212ENST00000543542 ERCC4Q92889 916 aaPredicted RBP6.92□□□□□ -1.3
LTBR-212ENST00000543542 LPPQ93052 612 aa6.92□□□□□ -1.3
LTBR-212ENST00000543542 TOP1MTQ969P6 601 aa6.92□□□□□ -1.3
LTBR-212ENST00000543542 VWCEQ96DN2 955 aa6.92□□□□□ -1.3
LTBR-212ENST00000543542 ACO2Q99798 780 aaKnown RBP6.92□□□□□ -1.3
LTBR-212ENST00000543542 MSTO1Q9BUK6 570 aa6.92□□□□□ -1.3
LTBR-212ENST00000543542 EIF2AQ9BY44 585 aaKnown RBP6.92□□□□□ -1.3
LTBR-212ENST00000543542 CCDC113Q9H0I3 377 aa6.92□□□□□ -1.3
LTBR-212ENST00000543542 NUP62CLQ9H1M0 184 aa6.92□□□□□ -1.3
LTBR-212ENST00000543542 PDZD7Q9H5P4 517 aa6.92□□□□□ -1.3
LTBR-212ENST00000543542 TMEM206Q9H813 350 aa6.92□□□□□ -1.3
LTBR-212ENST00000543542 TMEM161AQ9NX61 479 aa6.92□□□□□ -1.3
LTBR-212ENST00000543542 TNFSF13BQ9Y275 285 aa6.92□□□□□ -1.3
LTBR-212ENST00000543542 INPP5FQ9Y2H2 1132 aa6.92□□□□□ -1.3
LTBR-212ENST00000543542 PCDHB2Q9Y5E7 798 aa6.92□□□□□ -1.3
LTBR-212ENST00000543542 GBF1Q92538 1859 aa6.92□□□□□ -1.3
LTBR-212ENST00000543542 PTPRSQ13332 1948 aa6.91□□□□□ -1.3
LTBR-212ENST00000543542 A0A0U1RQF3 1178 aa6.91□□□□□ -1.3
LTBR-212ENST00000543542 A0A1B0GUA9 196 aa6.91□□□□□ -1.3
LTBR-212ENST00000543542 TTLL13PA6NNM8 815 aa6.91□□□□□ -1.3
LTBR-212ENST00000543542 C9IYK1 514 aa6.91□□□□□ -1.3
LTBR-212ENST00000543542 BIN1O00499 593 aa6.91□□□□□ -1.3
LTBR-212ENST00000543542 EIF3DO15371 548 aaKnown RBP eCLIP6.91□□□□□ -1.3
LTBR-212ENST00000543542 KLRC4O43908 158 aa6.91□□□□□ -1.3
LTBR-212ENST00000543542 TOM1L1O75674 476 aa6.91□□□□□ -1.3
LTBR-212ENST00000543542 GJB5O95377 273 aa6.91□□□□□ -1.3
LTBR-212ENST00000543542 FGFR1P11362 822 aa6.91□□□□□ -1.3
LTBR-212ENST00000543542 AKAP5P24588 427 aa6.91□□□□□ -1.3
LTBR-212ENST00000543542 HOXA11P31270 313 aaPredicted RBP6.91□□□□□ -1.3
LTBR-212ENST00000543542 CASP5P51878 434 aa6.91□□□□□ -1.3
LTBR-212ENST00000543542 RNASELQ05823 741 aaKnown RBP6.91□□□□□ -1.3
LTBR-212ENST00000543542 STIM1Q13586 685 aa6.91□□□□□ -1.3
LTBR-212ENST00000543542 BTG3Q14201 252 aaPredicted RBP6.91□□□□□ -1.3
LTBR-212ENST00000543542 KCNB1Q14721 858 aa6.91□□□□□ -1.3
LTBR-212ENST00000543542 NOLC1Q14978 699 aaKnown RBP eCLIP6.91□□□□□ -1.3
LTBR-212ENST00000543542 RAB30Q15771 203 aa6.91□□□□□ -1.3
LTBR-212ENST00000543542 EEF1DP3Q658K8 133 aa6.91□□□□□ -1.3
LTBR-212ENST00000543542 SLFN12LQ6IEE8 588 aa6.91□□□□□ -1.3
LTBR-212ENST00000543542 ARMCX5Q6P1M9 558 aa6.91□□□□□ -1.3
LTBR-212ENST00000543542 GLB1LQ6UWU2 654 aa6.91□□□□□ -1.3
LTBR-212ENST00000543542 MPZL3Q6UWV2 235 aa6.91□□□□□ -1.3
LTBR-212ENST00000543542 ZPBP2Q6X784 338 aa6.91□□□□□ -1.3
LTBR-212ENST00000543542 TAS1R3Q7RTX0 852 aa6.91□□□□□ -1.3
LTBR-212ENST00000543542 MAP4K3Q8IVH8 894 aa6.91□□□□□ -1.3
LTBR-212ENST00000543542 THNSL1Q8IYQ7 743 aa6.91□□□□□ -1.3
LTBR-212ENST00000543542 FIBCD1Q8N539 461 aa6.91□□□□□ -1.3
LTBR-212ENST00000543542 URGCPQ8TCY9 931 aa6.91□□□□□ -1.3
LTBR-212ENST00000543542 HELQQ8TDG4 1101 aa6.91□□□□□ -1.3
LTBR-212ENST00000543542 POMGNT1Q8WZA1 660 aa6.91□□□□□ -1.3
LTBR-212ENST00000543542 ZBTB45Q96K62 511 aaPredicted RBP6.91□□□□□ -1.3
LTBR-212ENST00000543542 FAM193BQ96PV7 902 aaPredicted RBP6.91□□□□□ -1.3
LTBR-212ENST00000543542 GSDMAQ96QA5 445 aa6.91□□□□□ -1.3
LTBR-212ENST00000543542 RPS6KC1Q96S38 1066 aa6.91□□□□□ -1.3
LTBR-212ENST00000543542 RAD9AQ99638 391 aa6.91□□□□□ -1.3
LTBR-212ENST00000543542 CCDC94Q9BW85 323 aaPredicted RBP6.91□□□□□ -1.3
LTBR-212ENST00000543542 FGFBP2Q9BYJ0 223 aa6.91□□□□□ -1.3
LTBR-212ENST00000543542 GTPBP4Q9BZE4 634 aaKnown RBP6.91□□□□□ -1.3
LTBR-212ENST00000543542 NXF3Q9H4D5 531 aaKnown RBP6.91□□□□□ -1.3
LTBR-212ENST00000543542 ST6GALNAC4Q9H4F1 302 aa6.91□□□□□ -1.3
LTBR-212ENST00000543542 ELAC1Q9H777 363 aaKnown RBP6.91□□□□□ -1.3
LTBR-212ENST00000543542 RSAD1Q9HA92 442 aa6.91□□□□□ -1.3
LTBR-212ENST00000543542 SLC28A3Q9HAS3 691 aa6.91□□□□□ -1.3
LTBR-212ENST00000543542 UBN1Q9NPG3 1134 aa6.91□□□□□ -1.3
LTBR-212ENST00000543542 SNTG2Q9NY99 539 aa6.91□□□□□ -1.3
LTBR-212ENST00000543542 MAPK8IP1Q9UQF2 711 aa6.91□□□□□ -1.3
LTBR-212ENST00000543542 GDAQ9Y2T3 454 aa6.91□□□□□ -1.3
LTBR-212ENST00000543542 HES2Q9Y543 173 aa6.91□□□□□ -1.3
LTBR-212ENST00000543542 IPPQ9Y573 584 aa6.91□□□□□ -1.3
LTBR-212ENST00000543542 INSL6Q9Y581 213 aa6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms