RNA–Protein interactions for RNA: ENST00000543205.1

CLIP1-217, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 2,018 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-217ENST00000543205 DDR2Q16832 855 aa5.75□□□□□ -1.49
CLIP1-217ENST00000543205 PCNX4Q63HM2 1172 aa5.75□□□□□ -1.49
CLIP1-217ENST00000543205 XRRA1Q6P2D8 792 aa5.75□□□□□ -1.49
CLIP1-217ENST00000543205 PDZRN4Q6ZMN7 1036 aaPredicted RBP5.75□□□□□ -1.49
CLIP1-217ENST00000543205 SEPT14Q6ZU15 432 aa5.75□□□□□ -1.49
CLIP1-217ENST00000543205 VSIG10LQ86VR7 867 aa5.75□□□□□ -1.49
CLIP1-217ENST00000543205 CHPFQ8IZ52 775 aa5.75□□□□□ -1.49
CLIP1-217ENST00000543205 TRPV1Q8NER1 839 aa5.75□□□□□ -1.49
CLIP1-217ENST00000543205 SHISA4Q96DD7 197 aa5.75□□□□□ -1.49
CLIP1-217ENST00000543205 INTS4Q96HW7 963 aaKnown RBP5.75□□□□□ -1.49
CLIP1-217ENST00000543205 SHDQ96IW2 340 aa5.75□□□□□ -1.49
CLIP1-217ENST00000543205 PGBD1Q96JS3 809 aa5.75□□□□□ -1.49
CLIP1-217ENST00000543205 TRIM56Q9BRZ2 755 aaKnown RBP5.75□□□□□ -1.49
CLIP1-217ENST00000543205 UBE2OQ9C0C9 1292 aaKnown RBP5.75□□□□□ -1.49
CLIP1-217ENST00000543205 XRN2Q9H0D6 950 aaKnown RBP eCLIP5.75□□□□□ -1.49
CLIP1-217ENST00000543205 GJB4Q9NTQ9 266 aa5.75□□□□□ -1.49
CLIP1-217ENST00000543205 FRMPD4Q14CM0 1322 aa5.74□□□□□ -1.49
CLIP1-217ENST00000543205 ZNFX1Q9P2E3 1918 aaKnown RBP5.74□□□□□ -1.49
CLIP1-217ENST00000543205 A0A087X0B3 334 aa5.74□□□□□ -1.49
CLIP1-217ENST00000543205 H3BQV1 296 aa5.74□□□□□ -1.49
CLIP1-217ENST00000543205 RARBP10826 455 aa5.74□□□□□ -1.49
CLIP1-217ENST00000543205 TRAPPC10P48553 1259 aa5.74□□□□□ -1.49
CLIP1-217ENST00000543205 GUCY1B3Q02153 619 aa5.74□□□□□ -1.49
CLIP1-217ENST00000543205 TNFAIP2Q03169 654 aa5.74□□□□□ -1.49
CLIP1-217ENST00000543205 TTLL4Q14679 1199 aa5.74□□□□□ -1.49
CLIP1-217ENST00000543205 NONOQ15233 471 aaKnown RBP eCLIP5.74□□□□□ -1.49
CLIP1-217ENST00000543205 TCEA2Q15560 299 aa5.74□□□□□ -1.49
CLIP1-217ENST00000543205 GNPTABQ3T906 1256 aa5.74□□□□□ -1.49
CLIP1-217ENST00000543205 TM4SF20Q53R12 229 aa5.74□□□□□ -1.49
CLIP1-217ENST00000543205 LARP1BQ659C4 914 aaKnown RBP5.74□□□□□ -1.49
CLIP1-217ENST00000543205 IQSEC1Q6DN90 963 aa5.74□□□□□ -1.49
CLIP1-217ENST00000543205 GET4Q7L5D6 327 aaPredicted RBP5.74□□□□□ -1.49
CLIP1-217ENST00000543205 NLRX1Q86UT6 975 aa5.74□□□□□ -1.49
CLIP1-217ENST00000543205 CREBRFQ8IUR6 639 aa5.74□□□□□ -1.49
CLIP1-217ENST00000543205 FBXO18Q8NFZ0 1043 aa5.74□□□□□ -1.49
CLIP1-217ENST00000543205 IL31RAQ8NI17 732 aa5.74□□□□□ -1.49
CLIP1-217ENST00000543205 SCFD2Q8WU76 684 aa5.74□□□□□ -1.49
CLIP1-217ENST00000543205 CHAC2Q8WUX2 184 aa5.74□□□□□ -1.49
CLIP1-217ENST00000543205 DEFB118Q96PH6 123 aa5.74□□□□□ -1.49
CLIP1-217ENST00000543205 SMAD5Q99717 465 aaKnown RBP5.74□□□□□ -1.49
CLIP1-217ENST00000543205 OXCT2Q9BYC2 517 aaPredicted RBP5.74□□□□□ -1.49
CLIP1-217ENST00000543205 WDR11Q9BZH6 1224 aa5.74□□□□□ -1.49
CLIP1-217ENST00000543205 PDGFCQ9NRA1 345 aa5.74□□□□□ -1.49
CLIP1-217ENST00000543205 RTEL1Q9NZ71 1219 aa5.74□□□□□ -1.49
CLIP1-217ENST00000543205 DDX20Q9UHI6 824 aaKnown RBP5.74□□□□□ -1.49
CLIP1-217ENST00000543205 PFDN2Q9UHV9 154 aa5.74□□□□□ -1.49
CLIP1-217ENST00000543205 MAPK8IP1Q9UQF2 711 aa5.74□□□□□ -1.49
CLIP1-217ENST00000543205 R3HCC1Q9Y3T6 440 aaKnown RBP5.74□□□□□ -1.49
CLIP1-217ENST00000543205 BTBD18B2RXH4 712 aa5.74□□□□□ -1.49
CLIP1-217ENST00000543205 ALG1L2C9J202 215 aa5.74□□□□□ -1.49
CLIP1-217ENST00000543205 ADAMTS3O15072 1205 aa5.74□□□□□ -1.49
CLIP1-217ENST00000543205 SLC26A4O43511 780 aa5.74□□□□□ -1.49
CLIP1-217ENST00000543205 SIN3BO75182 1162 aa5.74□□□□□ -1.49
CLIP1-217ENST00000543205 RASGRP1O95267 797 aa5.74□□□□□ -1.49
CLIP1-217ENST00000543205 MAP3K6O95382 1288 aa5.74□□□□□ -1.49
CLIP1-217ENST00000543205 TFRCP02786 760 aaKnown RBP5.74□□□□□ -1.49
CLIP1-217ENST00000543205 GJB1P08034 283 aa5.74□□□□□ -1.49
CLIP1-217ENST00000543205 TXNP10599 105 aaKnown RBP5.74□□□□□ -1.49
CLIP1-217ENST00000543205 PDCP20941 246 aa5.74□□□□□ -1.49
CLIP1-217ENST00000543205 SREBF1P36956 1147 aa5.74□□□□□ -1.49
CLIP1-217ENST00000543205 ADCYAP1R1P41586 468 aa5.74□□□□□ -1.49
CLIP1-217ENST00000543205 MRPS9P82933 396 aaKnown RBP5.74□□□□□ -1.49
CLIP1-217ENST00000543205 NPY5RQ15761 445 aa5.74□□□□□ -1.49
CLIP1-217ENST00000543205 ANO1Q5XXA6 986 aa5.74□□□□□ -1.49
CLIP1-217ENST00000543205 MCTP1Q6DN14 999 aa5.74□□□□□ -1.49
CLIP1-217ENST00000543205 IL31Q6EBC2 164 aa5.74□□□□□ -1.49
CLIP1-217ENST00000543205 TAPT1Q6NXT6 567 aa5.74□□□□□ -1.49
CLIP1-217ENST00000543205 KCNV1Q6PIU1 500 aa5.74□□□□□ -1.49
CLIP1-217ENST00000543205 PIK3AP1Q6ZUJ8 805 aa5.74□□□□□ -1.49
CLIP1-217ENST00000543205 SPATC1Q76KD6 591 aa5.74□□□□□ -1.49
CLIP1-217ENST00000543205 DIS3L2Q8IYB7 885 aaKnown RBP5.74□□□□□ -1.49
CLIP1-217ENST00000543205 C1orf127Q8N9H9 656 aa5.74□□□□□ -1.49
CLIP1-217ENST00000543205 TBCKQ8TEA7 893 aa5.74□□□□□ -1.49
CLIP1-217ENST00000543205 KATNBL1Q9H079 304 aa5.74□□□□□ -1.49
CLIP1-217ENST00000543205 PAK6Q9NQU5 681 aaPredicted RBP5.74□□□□□ -1.49
CLIP1-217ENST00000543205 PLXNA1Q9UIW2 1896 aa5.73□□□□□ -1.49
CLIP1-217ENST00000543205 RBBP6Q7Z6E9 1792 aaKnown RBP5.73□□□□□ -1.49
CLIP1-217ENST00000543205 CCDC163A0A0D9SF12 145 aa5.73□□□□□ -1.49
CLIP1-217ENST00000543205 C11orf97A0A1B0GVM6 126 aaPredicted RBP5.73□□□□□ -1.49
CLIP1-217ENST00000543205 MSTNO14793 375 aa5.73□□□□□ -1.49
CLIP1-217ENST00000543205 NKRFO15226 690 aaKnown RBP eCLIP5.73□□□□□ -1.49
CLIP1-217ENST00000543205 DUSP11O75319 330 aaKnown RBP5.73□□□□□ -1.49
CLIP1-217ENST00000543205 SGPL1O95470 568 aa5.73□□□□□ -1.49
CLIP1-217ENST00000543205 CYP3A4P08684 503 aa5.73□□□□□ -1.49
CLIP1-217ENST00000543205 TGFB3P10600 412 aa5.73□□□□□ -1.49
CLIP1-217ENST00000543205 PMLP29590 882 aa5.73□□□□□ -1.49
CLIP1-217ENST00000543205 FXR1P51114 621 aaKnown RBP eCLIP5.73□□□□□ -1.49
CLIP1-217ENST00000543205 USP11P51784 963 aa5.73□□□□□ -1.49
CLIP1-217ENST00000543205 GUCY2FP51841 1108 aa5.73□□□□□ -1.49
CLIP1-217ENST00000543205 PLAURQ03405 335 aa5.73□□□□□ -1.49
CLIP1-217ENST00000543205 MTMR1Q13613 665 aa5.73□□□□□ -1.49
CLIP1-217ENST00000543205 LY6KQ17RY6 165 aa5.73□□□□□ -1.49
CLIP1-217ENST00000543205 INF2Q27J81 1249 aa5.73□□□□□ -1.49
CLIP1-217ENST00000543205 DUSP28Q4G0W2 176 aa5.73□□□□□ -1.49
CLIP1-217ENST00000543205 CEP55Q53EZ4 464 aa5.73□□□□□ -1.49
CLIP1-217ENST00000543205 GOLGA6L1Q8N7Z2 621 aa5.73□□□□□ -1.49
CLIP1-217ENST00000543205 OR13H1Q8NG92 308 aa5.73□□□□□ -1.49
CLIP1-217ENST00000543205 U2AF1L4Q8WU68 220 aaKnown RBP5.73□□□□□ -1.49
CLIP1-217ENST00000543205 CPLX3Q8WVH0 158 aa5.73□□□□□ -1.49
CLIP1-217ENST00000543205 CDHR1Q96JP9 859 aa5.73□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms