RNA–Protein interactions for RNA: ENST00000543190.5

LTBR-211, Transcript of lymphotoxin beta receptor, humanhuman

TSL 3 BASIC

Gene LTBR, Length 785 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-211ENST00000543190 PLCD3Q8N3E9 789 aa20.75■□□□□ 0.91
LTBR-211ENST00000543190 CMASQ8NFW8 434 aaPredicted RBP20.75■□□□□ 0.91
LTBR-211ENST00000543190 PRIMPOLQ96LW4 560 aa20.75■□□□□ 0.91
LTBR-211ENST00000543190 INPP5FQ9Y2H2 1132 aa20.75■□□□□ 0.91
LTBR-211ENST00000543190 FAN1Q9Y2M0 1017 aa20.75■□□□□ 0.91
LTBR-211ENST00000543190 PLXNA3P51805 1871 aa20.75■□□□□ 0.91
LTBR-211ENST00000543190 A0A1B0GUA9 196 aa20.74■□□□□ 0.91
LTBR-211ENST00000543190 ARL5CA6NH57 179 aa20.74■□□□□ 0.91
LTBR-211ENST00000543190 NRP1O14786 923 aa20.74■□□□□ 0.91
LTBR-211ENST00000543190 SOD2P04179 222 aa20.74■□□□□ 0.91
LTBR-211ENST00000543190 EPCAMP16422 314 aa20.74■□□□□ 0.91
LTBR-211ENST00000543190 MUTP22033 750 aa20.74■□□□□ 0.91
LTBR-211ENST00000543190 CLCN4P51793 760 aa20.74■□□□□ 0.91
LTBR-211ENST00000543190 AFF1P51825 1210 aaKnown RBP20.74■□□□□ 0.91
LTBR-211ENST00000543190 CAPSQ13938 189 aa20.74■□□□□ 0.91
LTBR-211ENST00000543190 GPR149Q86SP6 731 aa20.74■□□□□ 0.91
LTBR-211ENST00000543190 SUGP1Q8IWZ8 645 aaKnown RBP20.74■□□□□ 0.91
LTBR-211ENST00000543190 NECAB1Q8N987 351 aa20.74■□□□□ 0.91
LTBR-211ENST00000543190 EMILIN2Q9BXX0 1053 aa20.74■□□□□ 0.91
LTBR-211ENST00000543190 SFXN1Q9H9B4 322 aa20.74■□□□□ 0.91
LTBR-211ENST00000543190 TUFT1Q9NNX1 390 aa20.74■□□□□ 0.91
LTBR-211ENST00000543190 DBR1Q9UK59 544 aaKnown RBP20.74■□□□□ 0.91
LTBR-211ENST00000543190 GIT1Q9Y2X7 761 aa20.74■□□□□ 0.91
LTBR-211ENST00000543190 USP34Q70CQ2 3546 aa20.74■□□□□ 0.91
LTBR-211ENST00000543190 C2CD4DB7Z1M9 353 aa20.73■□□□□ 0.91
LTBR-211ENST00000543190 CNPP09543 421 aaKnown RBP20.73■□□□□ 0.91
LTBR-211ENST00000543190 SPATA31C1P0DKV0 1188 aa20.73■□□□□ 0.91
LTBR-211ENST00000543190 ITGA4P13612 1032 aa20.73■□□□□ 0.91
LTBR-211ENST00000543190 NEK4P51957 841 aa20.73■□□□□ 0.91
LTBR-211ENST00000543190 PTPN5P54829 565 aa20.73■□□□□ 0.91
LTBR-211ENST00000543190 MTMR3Q13615 1198 aa20.73■□□□□ 0.91
LTBR-211ENST00000543190 FAM187BQ17R55 369 aa20.73■□□□□ 0.91
LTBR-211ENST00000543190 PPP4R3CPQ6ZMV5 832 aa20.73■□□□□ 0.91
LTBR-211ENST00000543190 HDAC7Q8WUI4 952 aa20.73■□□□□ 0.91
LTBR-211ENST00000543190 AUTS2Q8WXX7 1259 aa20.73■□□□□ 0.91
LTBR-211ENST00000543190 KLHL5Q96PQ7 755 aa20.73■□□□□ 0.91
LTBR-211ENST00000543190 FAM193BQ96PV7 902 aaPredicted RBP20.73■□□□□ 0.91
LTBR-211ENST00000543190 LLPHQ9BRT6 129 aaKnown RBP20.73■□□□□ 0.91
LTBR-211ENST00000543190 POLR3CQ9BUI4 534 aaPredicted RBP20.73■□□□□ 0.91
LTBR-211ENST00000543190 RXFP1Q9HBX9 757 aa20.73■□□□□ 0.91
LTBR-211ENST00000543190 MRPL17Q9NRX2 175 aaKnown RBP20.73■□□□□ 0.91
LTBR-211ENST00000543190 CHST7Q9NS84 486 aa20.73■□□□□ 0.91
LTBR-211ENST00000543190 MARCH5Q9NX47 278 aa20.73■□□□□ 0.91
LTBR-211ENST00000543190 WNT7AO00755 349 aa20.72■□□□□ 0.91
LTBR-211ENST00000543190 ARF4P18085 180 aaPredicted RBP20.72■□□□□ 0.91
LTBR-211ENST00000543190 GLRA2P23416 452 aa20.72■□□□□ 0.91
LTBR-211ENST00000543190 ST3GAL1Q11201 340 aa20.72■□□□□ 0.91
LTBR-211ENST00000543190 TRIM29Q14134 588 aa20.72■□□□□ 0.91
LTBR-211ENST00000543190 LONRF3Q496Y0 759 aa20.72■□□□□ 0.91
LTBR-211ENST00000543190 CDCA2Q69YH5 1023 aaPredicted RBP20.72■□□□□ 0.91
LTBR-211ENST00000543190 HACE1Q8IYU2 909 aa20.72■□□□□ 0.91
LTBR-211ENST00000543190 GSTCDQ8NEC7 633 aa20.72■□□□□ 0.91
LTBR-211ENST00000543190 MCPH1Q8NEM0 835 aa20.72■□□□□ 0.91
LTBR-211ENST00000543190 ASAP3Q8TDY4 903 aa20.72■□□□□ 0.91
LTBR-211ENST00000543190 RPS6KC1Q96S38 1066 aa20.72■□□□□ 0.91
LTBR-211ENST00000543190 HERC2P3Q9BVR0 1158 aa20.72■□□□□ 0.91
LTBR-211ENST00000543190 EIF2AQ9BY44 585 aaKnown RBP20.72■□□□□ 0.91
LTBR-211ENST00000543190 IRF2BPLQ9H1B7 796 aa20.72■□□□□ 0.91
LTBR-211ENST00000543190 DPP7Q9UHL4 492 aa20.72■□□□□ 0.91
LTBR-211ENST00000543190 RIF1Q5UIP0 2472 aaKnown RBP20.71■□□□□ 0.91
LTBR-211ENST00000543190 INO80B-WBP1J3KQ70 363 aa20.71■□□□□ 0.91
LTBR-211ENST00000543190 MRE11P49959 708 aa20.71■□□□□ 0.91
LTBR-211ENST00000543190 KIAA0319Q5VV43 1072 aa20.71■□□□□ 0.91
LTBR-211ENST00000543190 SLC27A1Q6PCB7 646 aa20.71■□□□□ 0.91
LTBR-211ENST00000543190 CABP7Q86V35 215 aa20.71■□□□□ 0.91
LTBR-211ENST00000543190 TMEM87AQ8NBN3 555 aa20.71■□□□□ 0.91
LTBR-211ENST00000543190 KREMEN2Q8NCW0 462 aa20.71■□□□□ 0.91
LTBR-211ENST00000543190 PRSS33Q8NF86 280 aa20.71■□□□□ 0.91
LTBR-211ENST00000543190 APOL5Q9BWW9 433 aa20.71■□□□□ 0.91
LTBR-211ENST00000543190 GBP3Q9H0R5 595 aa20.71■□□□□ 0.91
LTBR-211ENST00000543190 CDH22Q9UJ99 828 aa20.71■□□□□ 0.91
LTBR-211ENST00000543190 TRIP11Q15643 1979 aa20.71■□□□□ 0.91
LTBR-211ENST00000543190 JAK2O60674 1132 aa20.7■□□□□ 0.9
LTBR-211ENST00000543190 POMCP01189 267 aa20.7■□□□□ 0.9
LTBR-211ENST00000543190 RPA1P27694 616 aa20.7■□□□□ 0.9
LTBR-211ENST00000543190 TXKP42681 527 aa20.7■□□□□ 0.9
LTBR-211ENST00000543190 DSG1Q02413 1049 aa20.7■□□□□ 0.9
LTBR-211ENST00000543190 RARS2Q5T160 578 aaKnown RBP20.7■□□□□ 0.9
LTBR-211ENST00000543190 ALYREFQ86V81 257 aaKnown RBP20.7■□□□□ 0.9
LTBR-211ENST00000543190 CATSPER3Q86XQ3 398 aa20.7■□□□□ 0.9
LTBR-211ENST00000543190 TDRD5Q8NAT2 981 aaKnown RBP20.7■□□□□ 0.9
LTBR-211ENST00000543190 GAD1Q99259 594 aa20.7■□□□□ 0.9
LTBR-211ENST00000543190 RNF39Q9H2S5 420 aa20.7■□□□□ 0.9
LTBR-211ENST00000543190 FOXP1Q9H334 677 aaPredicted RBP20.7■□□□□ 0.9
LTBR-211ENST00000543190 FZD8Q9H461 694 aa20.7■□□□□ 0.9
LTBR-211ENST00000543190 URODP06132 367 aa20.69■□□□□ 0.9
LTBR-211ENST00000543190 ADH1AP07327 375 aa20.69■□□□□ 0.9
LTBR-211ENST00000543190 AVPR2P30518 371 aa20.69■□□□□ 0.9
LTBR-211ENST00000543190 TRAPPC10P48553 1259 aa20.69■□□□□ 0.9
LTBR-211ENST00000543190 TCF15Q12870 199 aa20.69■□□□□ 0.9
LTBR-211ENST00000543190 IER5LQ5T953 404 aa20.69■□□□□ 0.9
LTBR-211ENST00000543190 NACC1Q96RE7 527 aa20.69■□□□□ 0.9
LTBR-211ENST00000543190 TMEM60Q9H2L4 133 aa20.69■□□□□ 0.9
LTBR-211ENST00000543190 BMP2KQ9NSY1 1161 aaPredicted RBP20.69■□□□□ 0.9
LTBR-211ENST00000543190 PRMT7Q9NVM4 692 aaPredicted RBP20.69■□□□□ 0.9
LTBR-211ENST00000543190 POTEMA6NI47 508 aa20.68■□□□□ 0.9
LTBR-211ENST00000543190 NR1I2O75469 434 aa20.68■□□□□ 0.9
LTBR-211ENST00000543190 BRD1O95696 1058 aa20.68■□□□□ 0.9
LTBR-211ENST00000543190 KLRC2P26717 231 aa20.68■□□□□ 0.9
LTBR-211ENST00000543190 MLH1P40692 756 aa20.68■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms